RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 PPP2R1AP30153 589 aa15.08■□□□□ 0
NPC1L1-204ENST00000546276 REC8O95072 547 aa15.07■□□□□ 0
NPC1L1-204ENST00000546276 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
NPC1L1-204ENST00000546276 KIF16BQ96L93 1317 aa15.07■□□□□ 0
NPC1L1-204ENST00000546276 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
NPC1L1-204ENST00000546276 RIPK4P57078 832 aa15.06■□□□□ 0
NPC1L1-204ENST00000546276 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
NPC1L1-204ENST00000546276 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
NPC1L1-204ENST00000546276 API5Q9BZZ5 524 aaKnown RBP15.05■□□□□ 0
NPC1L1-204ENST00000546276 NAIPQ13075 1403 aa15.05■□□□□ 0
NPC1L1-204ENST00000546276 DIAPH1O60610 1272 aaKnown RBP15.05■□□□□ -0
NPC1L1-204ENST00000546276 PDE3AQ14432 1141 aa15.05■□□□□ -0
NPC1L1-204ENST00000546276 LNPKQ9C0E8 428 aa15.05■□□□□ -0
NPC1L1-204ENST00000546276 ATP6V1DQ9Y5K8 247 aa15.05■□□□□ -0
NPC1L1-204ENST00000546276 NUCB2P80303 420 aa15.04■□□□□ -0
NPC1L1-204ENST00000546276 RILPL2Q969X0 211 aa15.04■□□□□ -0
NPC1L1-204ENST00000546276 TPM4P67936 248 aa15.04■□□□□ -0
NPC1L1-204ENST00000546276 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
NPC1L1-204ENST00000546276 TRAK2O60296 914 aa15.03■□□□□ -0
NPC1L1-204ENST00000546276 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
NPC1L1-204ENST00000546276 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
NPC1L1-204ENST00000546276 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
NPC1L1-204ENST00000546276 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
NPC1L1-204ENST00000546276 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
NPC1L1-204ENST00000546276 FOXD4L3Q6VB84 417 aaPredicted RBP15.01□□□□□ -0.01
NPC1L1-204ENST00000546276 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
NPC1L1-204ENST00000546276 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
NPC1L1-204ENST00000546276 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
NPC1L1-204ENST00000546276 ROCK1Q13464 1354 aa15□□□□□ -0.01
NPC1L1-204ENST00000546276 COG3Q96JB2 828 aa15□□□□□ -0.01
NPC1L1-204ENST00000546276 AMPHP49418 695 aa14.99□□□□□ -0.01
NPC1L1-204ENST00000546276 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
NPC1L1-204ENST00000546276 MCTP1Q6DN14 999 aa14.99□□□□□ -0.01
NPC1L1-204ENST00000546276 MAP3K1Q13233 1512 aa14.99□□□□□ -0.01
NPC1L1-204ENST00000546276 BCAR3O75815 825 aa14.99□□□□□ -0.01
NPC1L1-204ENST00000546276 FAM13BQ9NYF5 915 aa14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 C11orf95C9JLR9 678 aaPredicted RBP14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 CDC45O75419 566 aa14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 KIF3AQ9Y496 699 aa14.98□□□□□ -0.01
NPC1L1-204ENST00000546276 DAPK1P53355 1430 aa14.97□□□□□ -0.01
NPC1L1-204ENST00000546276 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
NPC1L1-204ENST00000546276 GNAI1P63096 354 aa14.97□□□□□ -0.01
NPC1L1-204ENST00000546276 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
NPC1L1-204ENST00000546276 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
NPC1L1-204ENST00000546276 MTHFSP49914 203 aa14.96□□□□□ -0.01
NPC1L1-204ENST00000546276 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.015e-8■■■□□ 17.4
NPC1L1-204ENST00000546276 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
NPC1L1-204ENST00000546276 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
NPC1L1-204ENST00000546276 ANO2Q9NQ90 1003 aa14.94□□□□□ -0.02
NPC1L1-204ENST00000546276 C9orf84Q5VXU9 1444 aa14.94□□□□□ -0.02
NPC1L1-204ENST00000546276 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-204ENST00000546276 DIAPH3Q9NSV4 1193 aa14.94□□□□□ -0.02
NPC1L1-204ENST00000546276 SCAPERQ9BY12 1400 aa14.94□□□□□ -0.02
NPC1L1-204ENST00000546276 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 GOLGA6L19H0YKK7 550 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 H3BQV1 296 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 IFFO2Q5TF58 517 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
NPC1L1-204ENST00000546276 RUFY2Q8WXA3 655 aa14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 GORABQ5T7V8 394 aa14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 ANKRD30BQ9BXX2 1392 aa14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 ISY1Q9ULR0 285 aaKnown RBP14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 SF3A1Q15459 793 aaKnown RBP14.92□□□□□ -0.02
NPC1L1-204ENST00000546276 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 CFAP70Q5T0N1 1121 aa14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 BECN2A8MW95 431 aa14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 LTV1Q96GA3 475 aaPredicted RBP14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
NPC1L1-204ENST00000546276 TROQ12816 1431 aaPredicted RBP14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 NUTM2FA1L443 756 aa14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 TPM2P07951 284 aa14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 TNNT3P45378 269 aaPredicted RBP14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
NPC1L1-204ENST00000546276 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
NPC1L1-204ENST00000546276 CCDC173Q0VFZ6 552 aa14.89□□□□□ -0.03
NPC1L1-204ENST00000546276 WDR63Q8IWG1 891 aa14.89□□□□□ -0.03
NPC1L1-204ENST00000546276 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
NPC1L1-204ENST00000546276 CAVIN1Q6NZI2 390 aaKnown RBP14.89□□□□□ -0.03
NPC1L1-204ENST00000546276 PRG4Q92954 1404 aaPredicted RBP14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 HMOX1P09601 288 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 RABEP1Q15276 862 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 MAP7D2Q96T17 732 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 GCC1Q96CN9 775 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
NPC1L1-204ENST00000546276 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 MCM4P33991 863 aa14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 CSB-PGBD3P0DP91 1061 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms