RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FAM135BQ49AJ0 1406 aa19.62■□□□□ 0.73
COPS7A-221ENST00000546229 ROCK1Q13464 1354 aa19.6■□□□□ 0.73
COPS7A-221ENST00000546229 SLC52A1Q9NWF4 448 aa19.6■□□□□ 0.73
COPS7A-221ENST00000546229 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
COPS7A-221ENST00000546229 KCNA6P17658 529 aa19.59■□□□□ 0.73
COPS7A-221ENST00000546229 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
COPS7A-221ENST00000546229 SLC26A8Q96RN1 970 aa19.57■□□□□ 0.72
COPS7A-221ENST00000546229 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
COPS7A-221ENST00000546229 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
COPS7A-221ENST00000546229 RGS17Q9UGC6 210 aaPredicted RBP19.55■□□□□ 0.72
COPS7A-221ENST00000546229 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
COPS7A-221ENST00000546229 DIP2AQ14689 1571 aa19.54■□□□□ 0.72
COPS7A-221ENST00000546229 NRXN3Q9Y4C0 1643 aa19.52■□□□□ 0.72
COPS7A-221ENST00000546229 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
COPS7A-221ENST00000546229 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-221ENST00000546229 COL16A1Q07092 1604 aaPredicted RBP19.5■□□□□ 0.71
COPS7A-221ENST00000546229 SPHKAPQ2M3C7 1700 aa19.48■□□□□ 0.71
COPS7A-221ENST00000546229 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
COPS7A-221ENST00000546229 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
COPS7A-221ENST00000546229 PHLPP1O60346 1717 aa19.47■□□□□ 0.71
COPS7A-221ENST00000546229 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
COPS7A-221ENST00000546229 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
COPS7A-221ENST00000546229 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
COPS7A-221ENST00000546229 SETBP1Q9Y6X0 1596 aa19.45■□□□□ 0.7
COPS7A-221ENST00000546229 MSH6P52701 1360 aa19.44■□□□□ 0.7
COPS7A-221ENST00000546229 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
COPS7A-221ENST00000546229 TBX22Q9Y458 520 aa19.44■□□□□ 0.7
COPS7A-221ENST00000546229 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
COPS7A-221ENST00000546229 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
COPS7A-221ENST00000546229 TRPM2O94759 1503 aa19.43■□□□□ 0.7
COPS7A-221ENST00000546229 NUP155O75694 1391 aa19.41■□□□□ 0.7
COPS7A-221ENST00000546229 CLTCL1P53675 1640 aa19.4■□□□□ 0.7
COPS7A-221ENST00000546229 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
COPS7A-221ENST00000546229 LRP6O75581 1613 aa19.39■□□□□ 0.69
COPS7A-221ENST00000546229 SHPRHQ149N8 1683 aa19.38■□□□□ 0.69
COPS7A-221ENST00000546229 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
COPS7A-221ENST00000546229 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
COPS7A-221ENST00000546229 SLAIN2Q9P270 581 aa19.38■□□□□ 0.69
COPS7A-221ENST00000546229 PPP1R15AO75807 674 aaPredicted RBP19.37■□□□□ 0.69
COPS7A-221ENST00000546229 POTEAQ6S8J7 498 aa19.37■□□□□ 0.69
COPS7A-221ENST00000546229 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
COPS7A-221ENST00000546229 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
COPS7A-221ENST00000546229 DCCP43146 1447 aa19.35■□□□□ 0.69
COPS7A-221ENST00000546229 JCADQ9P266 1359 aa19.35■□□□□ 0.69
COPS7A-221ENST00000546229 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
COPS7A-221ENST00000546229 NAIPQ13075 1403 aa19.34■□□□□ 0.69
COPS7A-221ENST00000546229 NHSL1Q5SYE7 1610 aa19.33■□□□□ 0.69
COPS7A-221ENST00000546229 BCANQ96GW7 911 aa19.33■□□□□ 0.68
COPS7A-221ENST00000546229 NALCNQ8IZF0 1738 aa19.32■□□□□ 0.68
COPS7A-221ENST00000546229 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
COPS7A-221ENST00000546229 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
COPS7A-221ENST00000546229 MST1RQ04912 1400 aa19.3■□□□□ 0.68
COPS7A-221ENST00000546229 METP08581 1390 aa19.3■□□□□ 0.68
COPS7A-221ENST00000546229 C19orf44Q9H6X5 657 aa19.29■□□□□ 0.68
COPS7A-221ENST00000546229 PRAG1Q86YV5 1406 aa19.28■□□□□ 0.68
COPS7A-221ENST00000546229 ITGAEP38570 1179 aa19.28■□□□□ 0.68
COPS7A-221ENST00000546229 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
COPS7A-221ENST00000546229 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
COPS7A-221ENST00000546229 KIF1BO60333 1816 aa19.27■□□□□ 0.68
COPS7A-221ENST00000546229 LAMC1P11047 1609 aa19.26■□□□□ 0.67
COPS7A-221ENST00000546229 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
COPS7A-221ENST00000546229 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
COPS7A-221ENST00000546229 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
COPS7A-221ENST00000546229 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
COPS7A-221ENST00000546229 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
COPS7A-221ENST00000546229 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
COPS7A-221ENST00000546229 PTCH1Q13635 1447 aa19.22■□□□□ 0.67
COPS7A-221ENST00000546229 PPLO60437 1756 aa19.21■□□□□ 0.67
COPS7A-221ENST00000546229 ATF3P18847 181 aa19.2■□□□□ 0.66
COPS7A-221ENST00000546229 C14orf37Q86TY3 774 aa19.18■□□□□ 0.66
COPS7A-221ENST00000546229 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
COPS7A-221ENST00000546229 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
COPS7A-221ENST00000546229 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
COPS7A-221ENST00000546229 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
COPS7A-221ENST00000546229 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
COPS7A-221ENST00000546229 CDK12Q9NYV4 1490 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-221ENST00000546229 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
COPS7A-221ENST00000546229 SPATA31E1Q6ZUB1 1445 aa19.09■□□□□ 0.65
COPS7A-221ENST00000546229 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
COPS7A-221ENST00000546229 DDX17Q92841 729 aaKnown RBP19.08■□□□□ 0.64
COPS7A-221ENST00000546229 ZNF772Q68DY9 489 aaPredicted RBP19.07■□□□□ 0.64
COPS7A-221ENST00000546229 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
COPS7A-221ENST00000546229 TECPR2O15040 1411 aa19.07■□□□□ 0.64
COPS7A-221ENST00000546229 RPGRIP1LQ68CZ1 1315 aa19.05■□□□□ 0.64
COPS7A-221ENST00000546229 RGS12O14924 1447 aa19.04■□□□□ 0.64
COPS7A-221ENST00000546229 AFF2P51816 1311 aa19.03■□□□□ 0.64
COPS7A-221ENST00000546229 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
COPS7A-221ENST00000546229 VGFO15240 615 aaPredicted RBP19.03■□□□□ 0.64
COPS7A-221ENST00000546229 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
COPS7A-221ENST00000546229 LRRC59Q96AG4 307 aaKnown RBP19.02■□□□□ 0.64
COPS7A-221ENST00000546229 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
COPS7A-221ENST00000546229 PXDNQ92626 1479 aa19.02■□□□□ 0.63
COPS7A-221ENST00000546229 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
COPS7A-221ENST00000546229 MYOM2P54296 1465 aa19.01■□□□□ 0.63
COPS7A-221ENST00000546229 PIK3C2GO75747 1445 aa19■□□□□ 0.63
COPS7A-221ENST00000546229 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
COPS7A-221ENST00000546229 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
COPS7A-221ENST00000546229 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
COPS7A-221ENST00000546229 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
COPS7A-221ENST00000546229 FOXD1Q16676 465 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms