RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 TIMELESSQ9UNS1 1208 aa24.49■■□□□ 1.51
CADM1-220ENST00000546000 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
CADM1-220ENST00000546000 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
CADM1-220ENST00000546000 ZFYVE9O95405 1425 aa24.48■■□□□ 1.51
CADM1-220ENST00000546000 MYOM2P54296 1465 aa24.48■■□□□ 1.51
CADM1-220ENST00000546000 NBPF8Q3BBV2 869 aa24.48■■□□□ 1.51
CADM1-220ENST00000546000 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
CADM1-220ENST00000546000 ADGRF5Q8IZF2 1346 aa24.46■■□□□ 1.51
CADM1-220ENST00000546000 SETD1BQ9UPS6 1966 aaKnown RBP24.46■■□□□ 1.51
CADM1-220ENST00000546000 PRAG1Q86YV5 1406 aa24.45■■□□□ 1.51
CADM1-220ENST00000546000 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
CADM1-220ENST00000546000 ARHGAP23Q9P227 1491 aa24.44■■□□□ 1.5
CADM1-220ENST00000546000 SLIT1O75093 1534 aa24.43■■□□□ 1.5
CADM1-220ENST00000546000 RPGRIP1LQ68CZ1 1315 aa24.42■■□□□ 1.5
CADM1-220ENST00000546000 NRXN1Q9ULB1 1477 aa24.42■■□□□ 1.5
CADM1-220ENST00000546000 LMTK3Q96Q04 1460 aa24.4■■□□□ 1.5
CADM1-220ENST00000546000 TRPM1Q7Z4N2 1603 aa24.39■■□□□ 1.5
CADM1-220ENST00000546000 FBXO41Q8TF61 875 aa24.39■■□□□ 1.49
CADM1-220ENST00000546000 PIK3C2GO75747 1445 aa24.38■■□□□ 1.49
CADM1-220ENST00000546000 LTKP29376 864 aa24.37■■□□□ 1.49
CADM1-220ENST00000546000 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
CADM1-220ENST00000546000 THEMISQ8N1K5 641 aaPredicted RBP24.36■■□□□ 1.49
CADM1-220ENST00000546000 RALGAPBQ86X10 1494 aa24.36■■□□□ 1.49
CADM1-220ENST00000546000 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
CADM1-220ENST00000546000 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
CADM1-220ENST00000546000 HSPA2P54652 639 aa24.34■■□□□ 1.49
CADM1-220ENST00000546000 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
CADM1-220ENST00000546000 TXNDC2Q86VQ3 553 aa24.32■■□□□ 1.48
CADM1-220ENST00000546000 CFAP70Q5T0N1 1121 aa24.31■■□□□ 1.48
CADM1-220ENST00000546000 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
CADM1-220ENST00000546000 POLR1AO95602 1720 aaPredicted RBP24.3■■□□□ 1.48
CADM1-220ENST00000546000 NBPF1Q3BBV0 1214 aa24.3■■□□□ 1.48
CADM1-220ENST00000546000 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.3■■□□□ 1.48
CADM1-220ENST00000546000 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
CADM1-220ENST00000546000 SETBP1Q9Y6X0 1596 aa24.29■■□□□ 1.48
CADM1-220ENST00000546000 KIAA1210Q9ULL0 1709 aa24.29■■□□□ 1.48
CADM1-220ENST00000546000 PLEKHG1Q9ULL1 1385 aa24.28■■□□□ 1.48
CADM1-220ENST00000546000 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
CADM1-220ENST00000546000 STAC3Q96MF2 364 aa24.27■■□□□ 1.48
CADM1-220ENST00000546000 EID1Q9Y6B2 187 aa24.27■■□□□ 1.48
CADM1-220ENST00000546000 LAMC1P11047 1609 aa24.27■■□□□ 1.48
CADM1-220ENST00000546000 ROCK2O75116 1388 aaKnown RBP24.27■■□□□ 1.48
CADM1-220ENST00000546000 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
CADM1-220ENST00000546000 ADAMTS13Q76LX8 1427 aa24.26■■□□□ 1.47
CADM1-220ENST00000546000 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
CADM1-220ENST00000546000 BCANQ96GW7 911 aa24.23■■□□□ 1.47
CADM1-220ENST00000546000 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
CADM1-220ENST00000546000 ANKLE2Q86XL3 938 aa24.22■■□□□ 1.47
CADM1-220ENST00000546000 C14orf93Q9H972 538 aaKnown RBP24.22■■□□□ 1.47
CADM1-220ENST00000546000 GPRASP1Q5JY77 1395 aa24.21■■□□□ 1.47
CADM1-220ENST00000546000 TMEM132EQ6IEE7 984 aa24.21■■□□□ 1.47
CADM1-220ENST00000546000 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
CADM1-220ENST00000546000 STRCQ7RTU9 1775 aa24.19■■□□□ 1.46
CADM1-220ENST00000546000 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
CADM1-220ENST00000546000 CARD11Q9BXL7 1154 aa24.19■■□□□ 1.46
CADM1-220ENST00000546000 MED14O60244 1454 aa24.19■■□□□ 1.46
CADM1-220ENST00000546000 METP08581 1390 aa24.18■■□□□ 1.46
CADM1-220ENST00000546000 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
CADM1-220ENST00000546000 USP47Q96K76 1375 aa24.16■■□□□ 1.46
CADM1-220ENST00000546000 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.45
CADM1-220ENST00000546000 PTPRUQ92729 1446 aa24.12■■□□□ 1.45
CADM1-220ENST00000546000 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
CADM1-220ENST00000546000 HSPA5P11021 654 aaKnown RBP24.11■■□□□ 1.45
CADM1-220ENST00000546000 STK26Q9P289 416 aa24.11■■□□□ 1.45
CADM1-220ENST00000546000 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
CADM1-220ENST00000546000 TRAK1Q9UPV9 953 aa24.08■■□□□ 1.45
CADM1-220ENST00000546000 LRPPRCP42704 1394 aaKnown RBP24.07■■□□□ 1.44
CADM1-220ENST00000546000 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
CADM1-220ENST00000546000 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
CADM1-220ENST00000546000 XRN1Q8IZH2 1706 aaKnown RBP24.06■■□□□ 1.44
CADM1-220ENST00000546000 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
CADM1-220ENST00000546000 CPS1P31327 1500 aa24.03■■□□□ 1.44
CADM1-220ENST00000546000 ST20-MTHFSA0A0A6YYL1 179 aa24.01■■□□□ 1.43
CADM1-220ENST00000546000 QRICH2Q9H0J4 1663 aa24.01■■□□□ 1.43
CADM1-220ENST00000546000 PLEKHH1Q9ULM0 1364 aa24.01■■□□□ 1.43
CADM1-220ENST00000546000 DLC1Q96QB1 1528 aa24■■□□□ 1.43
CADM1-220ENST00000546000 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
CADM1-220ENST00000546000 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
CADM1-220ENST00000546000 TECPR2O15040 1411 aa24■■□□□ 1.43
CADM1-220ENST00000546000 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
CADM1-220ENST00000546000 EIF3AQ14152 1382 aaKnown RBP23.99■■□□□ 1.43
CADM1-220ENST00000546000 ABCC11Q96J66 1382 aa23.99■■□□□ 1.43
CADM1-220ENST00000546000 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
CADM1-220ENST00000546000 AMOTL2Q9Y2J4 779 aa23.98■■□□□ 1.43
CADM1-220ENST00000546000 STRCP1A6NGW2 1772 aa23.98■■□□□ 1.43
CADM1-220ENST00000546000 CERKQ8TCT0 537 aa23.97■■□□□ 1.43
CADM1-220ENST00000546000 PRAM1Q96QH2 718 aa23.97■■□□□ 1.43
CADM1-220ENST00000546000 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
CADM1-220ENST00000546000 KCNA6P17658 529 aa23.96■■□□□ 1.43
CADM1-220ENST00000546000 CENPJQ9HC77 1338 aaPredicted RBP23.95■■□□□ 1.42
CADM1-220ENST00000546000 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
CADM1-220ENST00000546000 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
CADM1-220ENST00000546000 PTCH1Q13635 1447 aa23.94■■□□□ 1.42
CADM1-220ENST00000546000 TESK2Q96S53 571 aa23.94■■□□□ 1.42
CADM1-220ENST00000546000 DISP3Q9P2K9 1392 aa23.91■■□□□ 1.42
CADM1-220ENST00000546000 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
CADM1-220ENST00000546000 C11orf95C9JLR9 678 aaPredicted RBP23.9■■□□□ 1.42
CADM1-220ENST00000546000 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
CADM1-220ENST00000546000 POGKQ9P215 609 aa23.9■■□□□ 1.42
CADM1-220ENST00000546000 FAM135BQ49AJ0 1406 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms