RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 TMEM131LA2VDJ0 1609 aa26.09■■□□□ 1.77
CPSF7-225ENST00000545934 SLC52A1Q9NWF4 448 aa26.07■■□□□ 1.76
CPSF7-225ENST00000545934 UNC13BO14795 1591 aa26.07■■□□□ 1.76
CPSF7-225ENST00000545934 ZFYVE9O95405 1425 aa26.06■■□□□ 1.76
CPSF7-225ENST00000545934 SLC26A8Q96RN1 970 aa26.06■■□□□ 1.76
CPSF7-225ENST00000545934 ANKRD50Q9ULJ7 1429 aa26.04■■□□□ 1.76
CPSF7-225ENST00000545934 E9PCH4 1651 aa26.02■■□□□ 1.76
CPSF7-225ENST00000545934 PHLPP1O60346 1717 aa26.01■■□□□ 1.75
CPSF7-225ENST00000545934 PROSER2Q86WR7 435 aaPredicted RBP26.01■■□□□ 1.75
CPSF7-225ENST00000545934 PLEKHG1Q9ULL1 1385 aa25.99■■□□□ 1.75
CPSF7-225ENST00000545934 RBM33Q96EV2 1170 aaKnown RBP25.98■■□□□ 1.75
CPSF7-225ENST00000545934 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
CPSF7-225ENST00000545934 RIMS2Q9UQ26 1411 aa25.96■■□□□ 1.75
CPSF7-225ENST00000545934 MSH6P52701 1360 aa25.95■■□□□ 1.74
CPSF7-225ENST00000545934 FAM50AQ14320 339 aaKnown RBP25.93■■□□□ 1.74
CPSF7-225ENST00000545934 COL16A1Q07092 1604 aaPredicted RBP25.92■■□□□ 1.74
CPSF7-225ENST00000545934 DIP2AQ14689 1571 aa25.92■■□□□ 1.74
CPSF7-225ENST00000545934 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.9■■□□□ 1.74
CPSF7-225ENST00000545934 NCOA3Q9Y6Q9 1424 aa25.89■■□□□ 1.74
CPSF7-225ENST00000545934 POTEAQ6S8J7 498 aa25.89■■□□□ 1.74
CPSF7-225ENST00000545934 SLAIN2Q9P270 581 aa25.89■■□□□ 1.74
CPSF7-225ENST00000545934 ADAMTS13Q76LX8 1427 aa25.88■■□□□ 1.73
CPSF7-225ENST00000545934 TBX22Q9Y458 520 aa25.88■■□□□ 1.73
CPSF7-225ENST00000545934 BCANQ96GW7 911 aa25.87■■□□□ 1.73
CPSF7-225ENST00000545934 ROCK1Q13464 1354 aa25.86■■□□□ 1.73
CPSF7-225ENST00000545934 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
CPSF7-225ENST00000545934 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
CPSF7-225ENST00000545934 JCADQ9P266 1359 aa25.83■■□□□ 1.73
CPSF7-225ENST00000545934 PPP1R15AO75807 674 aaPredicted RBP25.83■■□□□ 1.73
CPSF7-225ENST00000545934 SHPRHQ149N8 1683 aa25.83■■□□□ 1.73
CPSF7-225ENST00000545934 PIK3R4Q99570 1358 aa25.82■■□□□ 1.72
CPSF7-225ENST00000545934 AHDC1Q5TGY3 1603 aaPredicted RBP25.82■■□□□ 1.72
CPSF7-225ENST00000545934 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.82■■□□□ 1.72
CPSF7-225ENST00000545934 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
CPSF7-225ENST00000545934 SPHKAPQ2M3C7 1700 aa25.8■■□□□ 1.72
CPSF7-225ENST00000545934 TRPM2O94759 1503 aa25.8■■□□□ 1.72
CPSF7-225ENST00000545934 XRN1Q8IZH2 1706 aaKnown RBP25.78■■□□□ 1.72
CPSF7-225ENST00000545934 LRP6O75581 1613 aa25.77■■□□□ 1.72
CPSF7-225ENST00000545934 SETBP1Q9Y6X0 1596 aa25.74■■□□□ 1.71
CPSF7-225ENST00000545934 PTPRUQ92729 1446 aa25.74■■□□□ 1.71
CPSF7-225ENST00000545934 CHGAP10645 457 aaKnown RBP25.74■■□□□ 1.71
CPSF7-225ENST00000545934 NUTM2DQ5VT03 806 aaPredicted RBP25.73■■□□□ 1.71
CPSF7-225ENST00000545934 C19orf44Q9H6X5 657 aa25.72■■□□□ 1.71
CPSF7-225ENST00000545934 NUP155O75694 1391 aa25.71■■□□□ 1.71
CPSF7-225ENST00000545934 CADPS2Q86UW7 1296 aa25.71■■□□□ 1.71
CPSF7-225ENST00000545934 SPATA31A6Q5VVP1 1343 aa25.7■■□□□ 1.71
CPSF7-225ENST00000545934 NHSL1Q5SYE7 1610 aa25.7■■□□□ 1.7
CPSF7-225ENST00000545934 DCCP43146 1447 aa25.68■■□□□ 1.7
CPSF7-225ENST00000545934 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
CPSF7-225ENST00000545934 AMOTL2Q9Y2J4 779 aa25.66■■□□□ 1.7
CPSF7-225ENST00000545934 ATF3P18847 181 aa25.65■■□□□ 1.7
CPSF7-225ENST00000545934 ASXL1Q8IXJ9 1541 aa25.63■■□□□ 1.69
CPSF7-225ENST00000545934 CLTCL1P53675 1640 aa25.63■■□□□ 1.69
CPSF7-225ENST00000545934 KIF1BO60333 1816 aa25.63■■□□□ 1.69
CPSF7-225ENST00000545934 NALCNQ8IZF0 1738 aa25.63■■□□□ 1.69
CPSF7-225ENST00000545934 BRINP3Q76B58 766 aa25.62■■□□□ 1.69
CPSF7-225ENST00000545934 NEXMIFQ5QGS0 1516 aa25.62■■□□□ 1.69
CPSF7-225ENST00000545934 MST1RQ04912 1400 aa25.6■■□□□ 1.69
CPSF7-225ENST00000545934 SETD5Q9C0A6 1442 aa25.57■■□□□ 1.68
CPSF7-225ENST00000545934 ZNF772Q68DY9 489 aaPredicted RBP25.57■■□□□ 1.68
CPSF7-225ENST00000545934 METP08581 1390 aa25.56■■□□□ 1.68
CPSF7-225ENST00000545934 ITGAEP38570 1179 aa25.55■■□□□ 1.68
CPSF7-225ENST00000545934 LAMC1P11047 1609 aa25.55■■□□□ 1.68
CPSF7-225ENST00000545934 MEX3CQ5U5Q3 659 aaKnown RBP25.54■■□□□ 1.68
CPSF7-225ENST00000545934 ADGRL3Q9HAR2 1447 aa25.53■■□□□ 1.68
CPSF7-225ENST00000545934 CDK12Q9NYV4 1490 aaPredicted RBP25.51■■□□□ 1.67
CPSF7-225ENST00000545934 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
CPSF7-225ENST00000545934 UPF1Q92900 1129 aaKnown RBP eCLIP25.47■■□□□ 1.67
CPSF7-225ENST00000545934 PPLO60437 1756 aa25.46■■□□□ 1.67
CPSF7-225ENST00000545934 NAIPQ13075 1403 aa25.46■■□□□ 1.67
CPSF7-225ENST00000545934 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
CPSF7-225ENST00000545934 TRIM52Q96A61 297 aa25.45■■□□□ 1.66
CPSF7-225ENST00000545934 PRAG1Q86YV5 1406 aa25.45■■□□□ 1.66
CPSF7-225ENST00000545934 PTCH1Q13635 1447 aa25.44■■□□□ 1.66
CPSF7-225ENST00000545934 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
CPSF7-225ENST00000545934 NUTM2BA6NNL0 878 aaPredicted RBP25.43■■□□□ 1.66
CPSF7-225ENST00000545934 NUTM2EB1AL46 878 aaPredicted RBP25.43■■□□□ 1.66
CPSF7-225ENST00000545934 RXRBP28702 533 aa25.43■■□□□ 1.66
CPSF7-225ENST00000545934 NUTM2AQ8IVF1 878 aaPredicted RBP25.43■■□□□ 1.66
CPSF7-225ENST00000545934 LRRC59Q96AG4 307 aaKnown RBP25.43■■□□□ 1.66
CPSF7-225ENST00000545934 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
CPSF7-225ENST00000545934 C1orf167Q5SNV9 1468 aa25.41■■□□□ 1.66
CPSF7-225ENST00000545934 AFF2P51816 1311 aa25.41■■□□□ 1.66
CPSF7-225ENST00000545934 DDX17Q92841 729 aaKnown RBP25.38■■□□□ 1.65
CPSF7-225ENST00000545934 COL22A1Q8NFW1 1626 aaPredicted RBP25.37■■□□□ 1.65
CPSF7-225ENST00000545934 ROBO2Q9HCK4 1378 aa25.36■■□□□ 1.65
CPSF7-225ENST00000545934 RGS12O14924 1447 aa25.35■■□□□ 1.65
CPSF7-225ENST00000545934 IFT172Q9UG01 1749 aa25.32■■□□□ 1.64
CPSF7-225ENST00000545934 MARF1Q9Y4F3 1742 aaKnown RBP25.32■■□□□ 1.64
CPSF7-225ENST00000545934 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
CPSF7-225ENST00000545934 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
CPSF7-225ENST00000545934 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
CPSF7-225ENST00000545934 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
CPSF7-225ENST00000545934 RPGRIP1LQ68CZ1 1315 aa25.3■■□□□ 1.64
CPSF7-225ENST00000545934 CDC42BPGQ6DT37 1551 aa25.3■■□□□ 1.64
CPSF7-225ENST00000545934 RBM6P78332 1123 aaKnown RBP25.29■■□□□ 1.64
CPSF7-225ENST00000545934 QTRT2Q9H974 415 aaKnown RBP25.28■■□□□ 1.64
CPSF7-225ENST00000545934 ORAI2Q96SN7 254 aa25.27■■□□□ 1.64
CPSF7-225ENST00000545934 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
CPSF7-225ENST00000545934 PXDNQ92626 1479 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms