RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
CIT-217ENST00000545913 HOOK1Q9UJC3 728 aaKnown RBP14.33□□□□□ -0.12
CIT-217ENST00000545913 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
CIT-217ENST00000545913 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
CIT-217ENST00000545913 TRIM29Q14134 588 aa14.33□□□□□ -0.12
CIT-217ENST00000545913 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
CIT-217ENST00000545913 GPS2Q13227 327 aa14.32□□□□□ -0.12
CIT-217ENST00000545913 PDE4CQ08493 712 aa14.31□□□□□ -0.12
CIT-217ENST00000545913 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
CIT-217ENST00000545913 TRIM34Q9BYJ4 488 aa14.31□□□□□ -0.12
CIT-217ENST00000545913 DDX58O95786 925 aaKnown RBP14.31□□□□□ -0.12
CIT-217ENST00000545913 ANKRD20A12PQ8NF67 263 aa14.31□□□□□ -0.12
CIT-217ENST00000545913 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
CIT-217ENST00000545913 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
CIT-217ENST00000545913 BCL2L13Q9BXK5 485 aa14.3□□□□□ -0.12
CIT-217ENST00000545913 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
CIT-217ENST00000545913 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CIT-217ENST00000545913 PDE4AP27815 886 aa14.3□□□□□ -0.12
CIT-217ENST00000545913 IPO7O95373 1038 aaKnown RBP14.29□□□□□ -0.12
CIT-217ENST00000545913 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
CIT-217ENST00000545913 PRKRIP1Q9H875 184 aaPredicted RBP14.29□□□□□ -0.12
CIT-217ENST00000545913 TRDNQ13061 729 aa14.28□□□□□ -0.12
CIT-217ENST00000545913 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
CIT-217ENST00000545913 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
CIT-217ENST00000545913 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.12
CIT-217ENST00000545913 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.12
CIT-217ENST00000545913 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.12
CIT-217ENST00000545913 CRBNQ96SW2 442 aa14.27□□□□□ -0.12
CIT-217ENST00000545913 PTPRGP23470 1445 aa14.27□□□□□ -0.13
CIT-217ENST00000545913 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
CIT-217ENST00000545913 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
CIT-217ENST00000545913 CPLX1O14810 134 aa14.27□□□□□ -0.13
CIT-217ENST00000545913 GSE1Q14687 1217 aa14.27□□□□□ -0.13
CIT-217ENST00000545913 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
CIT-217ENST00000545913 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
CIT-217ENST00000545913 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
CIT-217ENST00000545913 API5Q9BZZ5 524 aaKnown RBP14.26□□□□□ -0.13
CIT-217ENST00000545913 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
CIT-217ENST00000545913 APPP05067 770 aa14.25□□□□□ -0.13
CIT-217ENST00000545913 PLIN1O60240 522 aa14.25□□□□□ -0.13
CIT-217ENST00000545913 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
CIT-217ENST00000545913 ANO2Q9NQ90 1003 aa14.25□□□□□ -0.13
CIT-217ENST00000545913 FOXD4L6Q3SYB3 417 aaPredicted RBP14.25□□□□□ -0.13
CIT-217ENST00000545913 FOXD4L3Q6VB84 417 aaPredicted RBP14.25□□□□□ -0.13
CIT-217ENST00000545913 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
CIT-217ENST00000545913 AAMPQ13685 434 aa14.24□□□□□ -0.13
CIT-217ENST00000545913 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
CIT-217ENST00000545913 PSME1Q06323 249 aa14.24□□□□□ -0.13
CIT-217ENST00000545913 KIF21BO75037 1637 aa14.24□□□□□ -0.13
CIT-217ENST00000545913 ERICH2A1L162 156 aa14.24□□□□□ -0.13
CIT-217ENST00000545913 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
CIT-217ENST00000545913 CTDP1Q9Y5B0 961 aaPredicted RBP14.24□□□□□ -0.13
CIT-217ENST00000545913 INTS3Q68E01 1043 aaKnown RBP14.24□□□□□ -0.13
CIT-217ENST00000545913 RIPK4P57078 832 aa14.23□□□□□ -0.13
CIT-217ENST00000545913 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
CIT-217ENST00000545913 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
CIT-217ENST00000545913 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
CIT-217ENST00000545913 SUPT6HQ7KZ85 1726 aaKnown RBP14.23□□□□□ -0.13
CIT-217ENST00000545913 PCMTD1Q96MG8 357 aaPredicted RBP14.23□□□□□ -0.13
CIT-217ENST00000545913 HSP90AB4PQ58FF6 505 aa14.22□□□□□ -0.13
CIT-217ENST00000545913 ERC2O15083 957 aa14.22□□□□□ -0.13
CIT-217ENST00000545913 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.22□□□□□ -0.13
CIT-217ENST00000545913 APAF1O14727 1248 aa14.22□□□□□ -0.13
CIT-217ENST00000545913 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
CIT-217ENST00000545913 FKBP5Q13451 457 aaPredicted RBP14.21□□□□□ -0.13
CIT-217ENST00000545913 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
CIT-217ENST00000545913 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.14
CIT-217ENST00000545913 NUCB2P80303 420 aa14.21□□□□□ -0.14
CIT-217ENST00000545913 BICD2Q8TD16 824 aa14.21□□□□□ -0.14
CIT-217ENST00000545913 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
CIT-217ENST00000545913 NFXL1Q6ZNB6 911 aa14.2□□□□□ -0.14
CIT-217ENST00000545913 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
CIT-217ENST00000545913 GNAI1P63096 354 aa14.19□□□□□ -0.14
CIT-217ENST00000545913 SAFBQ15424 915 aaKnown RBP eCLIP14.19□□□□□ -0.14
CIT-217ENST00000545913 RAD21O60216 631 aa14.19□□□□□ -0.14
CIT-217ENST00000545913 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
CIT-217ENST00000545913 TEX35Q5T0J7 233 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 SASS6Q6UVJ0 657 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 CCDC43Q96MW1 224 aaKnown RBP14.18□□□□□ -0.14
CIT-217ENST00000545913 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
CIT-217ENST00000545913 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
CIT-217ENST00000545913 MSH5O43196 834 aa14.17□□□□□ -0.14
CIT-217ENST00000545913 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
CIT-217ENST00000545913 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
CIT-217ENST00000545913 NECTIN2Q92692 538 aa14.17□□□□□ -0.14
CIT-217ENST00000545913 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
CIT-217ENST00000545913 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
CIT-217ENST00000545913 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
CIT-217ENST00000545913 BRMS1Q9HCU9 246 aa14.15□□□□□ -0.14
CIT-217ENST00000545913 WWC1Q8IX03 1113 aa14.15□□□□□ -0.14
CIT-217ENST00000545913 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
CIT-217ENST00000545913 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
CIT-217ENST00000545913 CCDC73Q6ZRK6 1079 aa14.15□□□□□ -0.14
CIT-217ENST00000545913 VPS37CA5D8V6 355 aaPredicted RBP14.14□□□□□ -0.15
CIT-217ENST00000545913 SLC4A3P48751 1232 aa14.14□□□□□ -0.15
CIT-217ENST00000545913 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms