RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 ST20-MTHFSA0A0A6YYL1 179 aa8.79□□□□□ -1
NECAP1-208ENST00000545807 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
NECAP1-208ENST00000545807 ZFYVE16Q7Z3T8 1539 aa8.79□□□□□ -1
NECAP1-208ENST00000545807 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
NECAP1-208ENST00000545807 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
NECAP1-208ENST00000545807 YEATS2Q9ULM3 1422 aa8.78□□□□□ -1
NECAP1-208ENST00000545807 ANP32CO43423 234 aa8.78□□□□□ -1
NECAP1-208ENST00000545807 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
NECAP1-208ENST00000545807 PLA2R1Q13018 1463 aa8.78□□□□□ -1
NECAP1-208ENST00000545807 ZNF518AQ6AHZ1 1483 aa8.77□□□□□ -1
NECAP1-208ENST00000545807 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1.01
NECAP1-208ENST00000545807 ROCK2O75116 1388 aaKnown RBP8.77□□□□□ -1.01
NECAP1-208ENST00000545807 POGZQ7Z3K3 1410 aa8.76□□□□□ -1.01
NECAP1-208ENST00000545807 ERBINQ96RT1 1412 aa8.76□□□□□ -1.01
NECAP1-208ENST00000545807 FTSJ3Q8IY81 847 aaKnown RBP8.76□□□□□ -1.01
NECAP1-208ENST00000545807 USP47Q96K76 1375 aa8.76□□□□□ -1.01
NECAP1-208ENST00000545807 A2MP01023 1474 aa8.76□□□□□ -1.01
NECAP1-208ENST00000545807 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
NECAP1-208ENST00000545807 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-208ENST00000545807 RTEL1-TNFRSF6BF6WH68 1400 aa8.75□□□□□ -1.01
NECAP1-208ENST00000545807 MAST1Q9Y2H9 1570 aa8.75□□□□□ -1.01
NECAP1-208ENST00000545807 BCCIPQ9P287 314 aaKnown RBP eCLIP8.75□□□□□ -1.01
NECAP1-208ENST00000545807 UGGT1Q9NYU2 1555 aa8.75□□□□□ -1.01
NECAP1-208ENST00000545807 KIF7Q2M1P5 1343 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 PLXNC1O60486 1568 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 CLCN1P35523 988 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 NPM2Q86SE8 214 aaKnown RBP8.74□□□□□ -1.01
NECAP1-208ENST00000545807 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 KIDINS220Q9ULH0 1771 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 STAG3Q9UJ98 1225 aa8.74□□□□□ -1.01
NECAP1-208ENST00000545807 ARAP3Q8WWN8 1544 aa8.73□□□□□ -1.01
NECAP1-208ENST00000545807 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
NECAP1-208ENST00000545807 ESF1Q9H501 851 aaKnown RBP8.73□□□□□ -1.01
NECAP1-208ENST00000545807 PNNQ9H307 717 aaKnown RBP8.72□□□□□ -1.01
NECAP1-208ENST00000545807 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
NECAP1-208ENST00000545807 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
NECAP1-208ENST00000545807 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
NECAP1-208ENST00000545807 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
NECAP1-208ENST00000545807 SMAP1Q8IYB5 467 aaPredicted RBP8.72□□□□□ -1.01
NECAP1-208ENST00000545807 INO80Q9ULG1 1556 aaPredicted RBP8.71□□□□□ -1.01
NECAP1-208ENST00000545807 ADGRF5Q8IZF2 1346 aa8.71□□□□□ -1.01
NECAP1-208ENST00000545807 CCDC7Q96M83 1385 aa8.71□□□□□ -1.02
NECAP1-208ENST00000545807 KDM5DQ9BY66 1539 aa8.71□□□□□ -1.02
NECAP1-208ENST00000545807 CCDC184Q52MB2 194 aa8.71□□□□□ -1.02
NECAP1-208ENST00000545807 SECISBP2LQ93073 1101 aaKnown RBP8.71□□□□□ -1.02
NECAP1-208ENST00000545807 UNC13BO14795 1591 aa8.71□□□□□ -1.02
NECAP1-208ENST00000545807 NEO1Q92859 1461 aa8.7□□□□□ -1.02
NECAP1-208ENST00000545807 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-208ENST00000545807 VGFO15240 615 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-208ENST00000545807 TMEM51Q9NW97 253 aa8.7□□□□□ -1.02
NECAP1-208ENST00000545807 ATP10AO60312 1499 aa8.7□□□□□ -1.02
NECAP1-208ENST00000545807 FAM9BQ8IZU0 186 aa8.7□□□□□ -1.02
NECAP1-208ENST00000545807 IDI1Q13907 227 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 RNF216Q9NWF9 866 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-208ENST00000545807 STK26Q9P289 416 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 DIP2BQ9P265 1576 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 IQGAP3Q86VI3 1631 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 TPM2P07951 284 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 E9PCH4 1651 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 HECW2Q9P2P5 1572 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 MLH3Q9UHC1 1453 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 CEBPAP49715 358 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-208ENST00000545807 POTEDQ86YR6 584 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
NECAP1-208ENST00000545807 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
NECAP1-208ENST00000545807 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
NECAP1-208ENST00000545807 UTP14CQ5TAP6 766 aaKnown RBP8.68□□□□□ -1.02
NECAP1-208ENST00000545807 ZNF830Q96NB3 372 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-208ENST00000545807 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-208ENST00000545807 IRX6P78412 446 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-208ENST00000545807 NPATQ14207 1427 aa8.68□□□□□ -1.02
NECAP1-208ENST00000545807 PRAG1Q86YV5 1406 aa8.67□□□□□ -1.02
NECAP1-208ENST00000545807 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-208ENST00000545807 CEP152O94986 1710 aa8.67□□□□□ -1.02
NECAP1-208ENST00000545807 FRMPD1Q5SYB0 1578 aa8.67□□□□□ -1.02
NECAP1-208ENST00000545807 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
NECAP1-208ENST00000545807 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
NECAP1-208ENST00000545807 MAP3K4Q9Y6R4 1608 aa8.66□□□□□ -1.02
NECAP1-208ENST00000545807 MRS2Q9HD23 443 aa8.66□□□□□ -1.02
NECAP1-208ENST00000545807 MAGI2Q86UL8 1455 aa8.66□□□□□ -1.02
NECAP1-208ENST00000545807 CC2D1BQ5T0F9 858 aaKnown RBP8.66□□□□□ -1.02
NECAP1-208ENST00000545807 SPATA31E1Q6ZUB1 1445 aa8.66□□□□□ -1.02
NECAP1-208ENST00000545807 KDM5CP41229 1560 aa8.65□□□□□ -1.02
NECAP1-208ENST00000545807 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
NECAP1-208ENST00000545807 NOS1P29475 1434 aa8.65□□□□□ -1.03
NECAP1-208ENST00000545807 DIP2CQ9Y2E4 1556 aa8.65□□□□□ -1.03
NECAP1-208ENST00000545807 CLTCL1P53675 1640 aa8.65□□□□□ -1.03
NECAP1-208ENST00000545807 MROH1Q8NDA8 1641 aa8.64□□□□□ -1.03
NECAP1-208ENST00000545807 HSP90B1P14625 803 aaKnown RBP8.64□□□□□ -1.03
NECAP1-208ENST00000545807 HNRNPUQ00839 825 aaKnown RBP eCLIP8.64□□□□□ -1.03
NECAP1-208ENST00000545807 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-208ENST00000545807 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
NECAP1-208ENST00000545807 PPRC1Q5VV67 1664 aaKnown RBP8.64□□□□□ -1.03
NECAP1-208ENST00000545807 UHRF1BP1Q6BDS2 1440 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 DISP3Q9P2K9 1392 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 MAP7D2Q96T17 732 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 CNTLNQ9NXG0 1405 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms