RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
SCNN1A-223ENST00000545605 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
SCNN1A-223ENST00000545605 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
SCNN1A-223ENST00000545605 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
SCNN1A-223ENST00000545605 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
SCNN1A-223ENST00000545605 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
SCNN1A-223ENST00000545605 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-223ENST00000545605 SLIT1O75093 1534 aa16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 ZNF316A6NFI3 1004 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 ROCK2O75116 1388 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 ADGRB1O14514 1584 aa16.47■□□□□ 0.23
SCNN1A-223ENST00000545605 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
SCNN1A-223ENST00000545605 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
SCNN1A-223ENST00000545605 IDI1Q13907 227 aa16.45■□□□□ 0.22
SCNN1A-223ENST00000545605 USP47Q96K76 1375 aa16.45■□□□□ 0.22
SCNN1A-223ENST00000545605 PTPRMP28827 1452 aa16.44■□□□□ 0.22
SCNN1A-223ENST00000545605 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
SCNN1A-223ENST00000545605 ZNF326Q5BKZ1 582 aaKnown RBP16.44■□□□□ 0.22
SCNN1A-223ENST00000545605 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
SCNN1A-223ENST00000545605 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
SCNN1A-223ENST00000545605 RIMS2Q9UQ26 1411 aa16.42■□□□□ 0.22
SCNN1A-223ENST00000545605 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
SCNN1A-223ENST00000545605 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
SCNN1A-223ENST00000545605 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
SCNN1A-223ENST00000545605 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
SCNN1A-223ENST00000545605 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCNN1A-223ENST00000545605 ALKQ9UM73 1620 aa16.4■□□□□ 0.22
SCNN1A-223ENST00000545605 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
SCNN1A-223ENST00000545605 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
SCNN1A-223ENST00000545605 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-223ENST00000545605 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
SCNN1A-223ENST00000545605 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
SCNN1A-223ENST00000545605 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-223ENST00000545605 CPS1P31327 1500 aa16.35■□□□□ 0.21
SCNN1A-223ENST00000545605 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
SCNN1A-223ENST00000545605 DLC1Q96QB1 1528 aa16.34■□□□□ 0.21
SCNN1A-223ENST00000545605 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
SCNN1A-223ENST00000545605 MYOM1P52179 1685 aa16.33■□□□□ 0.2
SCNN1A-223ENST00000545605 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
SCNN1A-223ENST00000545605 SBNO2Q9Y2G9 1366 aa16.31■□□□□ 0.2
SCNN1A-223ENST00000545605 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCNN1A-223ENST00000545605 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-223ENST00000545605 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
SCNN1A-223ENST00000545605 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
SCNN1A-223ENST00000545605 MED14O60244 1454 aa16.28■□□□□ 0.2
SCNN1A-223ENST00000545605 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
SCNN1A-223ENST00000545605 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
SCNN1A-223ENST00000545605 TECPR2O15040 1411 aa16.27■□□□□ 0.19
SCNN1A-223ENST00000545605 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
SCNN1A-223ENST00000545605 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-223ENST00000545605 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-223ENST00000545605 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
SCNN1A-223ENST00000545605 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
SCNN1A-223ENST00000545605 NWD1Q149M9 1564 aa16.22■□□□□ 0.19
SCNN1A-223ENST00000545605 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
SCNN1A-223ENST00000545605 THEMISQ8N1K5 641 aaPredicted RBP16.22■□□□□ 0.19
SCNN1A-223ENST00000545605 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
SCNN1A-223ENST00000545605 TULP4Q9NRJ4 1543 aa16.22■□□□□ 0.19
SCNN1A-223ENST00000545605 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
SCNN1A-223ENST00000545605 NUTM2DQ5VT03 806 aaPredicted RBP16.21■□□□□ 0.19
SCNN1A-223ENST00000545605 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
SCNN1A-223ENST00000545605 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
SCNN1A-223ENST00000545605 KIF7Q2M1P5 1343 aa16.2■□□□□ 0.18
SCNN1A-223ENST00000545605 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
SCNN1A-223ENST00000545605 TESK2Q96S53 571 aa16.2■□□□□ 0.18
SCNN1A-223ENST00000545605 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
SCNN1A-223ENST00000545605 LMTK3Q96Q04 1460 aa16.19■□□□□ 0.18
SCNN1A-223ENST00000545605 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
SCNN1A-223ENST00000545605 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
SCNN1A-223ENST00000545605 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
SCNN1A-223ENST00000545605 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
SCNN1A-223ENST00000545605 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
SCNN1A-223ENST00000545605 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
SCNN1A-223ENST00000545605 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
SCNN1A-223ENST00000545605 LTKP29376 864 aa16.16■□□□□ 0.18
SCNN1A-223ENST00000545605 METP08581 1390 aa16.15■□□□□ 0.18
SCNN1A-223ENST00000545605 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
SCNN1A-223ENST00000545605 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 USP32Q8NFA0 1604 aa16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
SCNN1A-223ENST00000545605 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
SCNN1A-223ENST00000545605 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
SCNN1A-223ENST00000545605 TMF1P82094 1093 aa16.13■□□□□ 0.17
SCNN1A-223ENST00000545605 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
SCNN1A-223ENST00000545605 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
SCNN1A-223ENST00000545605 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
SCNN1A-223ENST00000545605 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
SCNN1A-223ENST00000545605 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
SCNN1A-223ENST00000545605 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
SCNN1A-223ENST00000545605 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
SCNN1A-223ENST00000545605 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.17
SCNN1A-223ENST00000545605 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
SCNN1A-223ENST00000545605 ANKLE2Q86XL3 938 aa16.08■□□□□ 0.16
SCNN1A-223ENST00000545605 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
SCNN1A-223ENST00000545605 ANKRD26Q9UPS8 1709 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms