RNA–Protein interactions for RNA: ENST00000545436.5

LMO3-232, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-232ENST00000545436 CEP170BQ9Y4F5 1589 aaPredicted RBP17.8■□□□□ 0.44
LMO3-232ENST00000545436 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
LMO3-232ENST00000545436 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
LMO3-232ENST00000545436 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
LMO3-232ENST00000545436 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
LMO3-232ENST00000545436 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.44
LMO3-232ENST00000545436 MYO5BQ9ULV0 1848 aa17.77■□□□□ 0.44
LMO3-232ENST00000545436 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
LMO3-232ENST00000545436 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
LMO3-232ENST00000545436 SLIT1O75093 1534 aa17.77■□□□□ 0.43
LMO3-232ENST00000545436 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
LMO3-232ENST00000545436 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
LMO3-232ENST00000545436 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
LMO3-232ENST00000545436 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
LMO3-232ENST00000545436 LAMC1P11047 1609 aa17.75■□□□□ 0.43
LMO3-232ENST00000545436 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
LMO3-232ENST00000545436 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
LMO3-232ENST00000545436 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
LMO3-232ENST00000545436 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
LMO3-232ENST00000545436 CHGAP10645 457 aaKnown RBP17.73■□□□□ 0.43
LMO3-232ENST00000545436 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
LMO3-232ENST00000545436 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
LMO3-232ENST00000545436 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
LMO3-232ENST00000545436 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
LMO3-232ENST00000545436 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
LMO3-232ENST00000545436 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
LMO3-232ENST00000545436 GPRASP1Q5JY77 1395 aa17.67■□□□□ 0.42
LMO3-232ENST00000545436 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
LMO3-232ENST00000545436 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
LMO3-232ENST00000545436 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
LMO3-232ENST00000545436 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
LMO3-232ENST00000545436 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
LMO3-232ENST00000545436 NBPF8Q3BBV2 869 aa17.62■□□□□ 0.41
LMO3-232ENST00000545436 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
LMO3-232ENST00000545436 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
LMO3-232ENST00000545436 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
LMO3-232ENST00000545436 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
LMO3-232ENST00000545436 MED14O60244 1454 aa17.61■□□□□ 0.41
LMO3-232ENST00000545436 ANKLE2Q86XL3 938 aa17.6■□□□□ 0.41
LMO3-232ENST00000545436 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
LMO3-232ENST00000545436 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
LMO3-232ENST00000545436 ALKQ9UM73 1620 aa17.58■□□□□ 0.4
LMO3-232ENST00000545436 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
LMO3-232ENST00000545436 LMTK3Q96Q04 1460 aa17.57■□□□□ 0.4
LMO3-232ENST00000545436 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
LMO3-232ENST00000545436 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
LMO3-232ENST00000545436 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
LMO3-232ENST00000545436 PIK3R4Q99570 1358 aa17.56■□□□□ 0.4
LMO3-232ENST00000545436 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
LMO3-232ENST00000545436 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
LMO3-232ENST00000545436 EIF4G2P78344 907 aaKnown RBP eCLIP17.54■□□□□ 0.4
LMO3-232ENST00000545436 LTKP29376 864 aa17.53■□□□□ 0.4
LMO3-232ENST00000545436 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
LMO3-232ENST00000545436 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
LMO3-232ENST00000545436 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.39
LMO3-232ENST00000545436 USP47Q96K76 1375 aa17.52■□□□□ 0.39
LMO3-232ENST00000545436 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
LMO3-232ENST00000545436 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
LMO3-232ENST00000545436 TECPR2O15040 1411 aa17.5■□□□□ 0.39
LMO3-232ENST00000545436 NPHP4O75161 1426 aaPredicted RBP17.5■□□□□ 0.39
LMO3-232ENST00000545436 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
LMO3-232ENST00000545436 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
LMO3-232ENST00000545436 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
LMO3-232ENST00000545436 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
LMO3-232ENST00000545436 ABCC11Q96J66 1382 aa17.48■□□□□ 0.39
LMO3-232ENST00000545436 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
LMO3-232ENST00000545436 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
LMO3-232ENST00000545436 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
LMO3-232ENST00000545436 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
LMO3-232ENST00000545436 CPS1P31327 1500 aa17.46■□□□□ 0.39
LMO3-232ENST00000545436 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
LMO3-232ENST00000545436 BCANQ96GW7 911 aa17.45■□□□□ 0.38
LMO3-232ENST00000545436 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
LMO3-232ENST00000545436 PTCH1Q13635 1447 aa17.44■□□□□ 0.38
LMO3-232ENST00000545436 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
LMO3-232ENST00000545436 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
LMO3-232ENST00000545436 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
LMO3-232ENST00000545436 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
LMO3-232ENST00000545436 STRCQ7RTU9 1775 aa17.42■□□□□ 0.38
LMO3-232ENST00000545436 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
LMO3-232ENST00000545436 METP08581 1390 aa17.4■□□□□ 0.38
LMO3-232ENST00000545436 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
LMO3-232ENST00000545436 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
LMO3-232ENST00000545436 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
LMO3-232ENST00000545436 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
LMO3-232ENST00000545436 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
LMO3-232ENST00000545436 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
LMO3-232ENST00000545436 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
LMO3-232ENST00000545436 SLC26A8Q96RN1 970 aa17.37■□□□□ 0.37
LMO3-232ENST00000545436 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
LMO3-232ENST00000545436 HSPA2P54652 639 aa17.35■□□□□ 0.37
LMO3-232ENST00000545436 TMF1P82094 1093 aa17.35■□□□□ 0.37
LMO3-232ENST00000545436 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
LMO3-232ENST00000545436 ADGRB2O60241 1585 aa17.34■□□□□ 0.37
LMO3-232ENST00000545436 KCNA6P17658 529 aa17.34■□□□□ 0.37
LMO3-232ENST00000545436 TESK2Q96S53 571 aa17.34■□□□□ 0.37
LMO3-232ENST00000545436 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
LMO3-232ENST00000545436 PTPRUQ92729 1446 aa17.33■□□□□ 0.36
LMO3-232ENST00000545436 POGKQ9P215 609 aa17.32■□□□□ 0.36
LMO3-232ENST00000545436 AMOTL2Q9Y2J4 779 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms