RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
SCARB1-209ENST00000545305 ROCK2O75116 1388 aaKnown RBP19.5■□□□□ 0.71
SCARB1-209ENST00000545305 NRXN1Q9ULB1 1477 aa19.48■□□□□ 0.71
SCARB1-209ENST00000545305 KIAA1210Q9ULL0 1709 aa19.48■□□□□ 0.71
SCARB1-209ENST00000545305 MYO3AQ8NEV4 1616 aa19.48■□□□□ 0.71
SCARB1-209ENST00000545305 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
SCARB1-209ENST00000545305 EIF4G2P78344 907 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCARB1-209ENST00000545305 UBR1Q8IWV7 1749 aa19.47■□□□□ 0.71
SCARB1-209ENST00000545305 LAMC1P11047 1609 aa19.47■□□□□ 0.71
SCARB1-209ENST00000545305 CARD11Q9BXL7 1154 aa19.46■□□□□ 0.71
SCARB1-209ENST00000545305 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
SCARB1-209ENST00000545305 ZFYVE9O95405 1425 aa19.45■□□□□ 0.7
SCARB1-209ENST00000545305 GPRASP1Q5JY77 1395 aa19.44■□□□□ 0.7
SCARB1-209ENST00000545305 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
SCARB1-209ENST00000545305 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
SCARB1-209ENST00000545305 PTPRMP28827 1452 aa19.43■□□□□ 0.7
SCARB1-209ENST00000545305 USP47Q96K76 1375 aa19.43■□□□□ 0.7
SCARB1-209ENST00000545305 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
SCARB1-209ENST00000545305 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.42■□□□□ 0.7
SCARB1-209ENST00000545305 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
SCARB1-209ENST00000545305 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
SCARB1-209ENST00000545305 NUTM2DQ5VT03 806 aaPredicted RBP19.4■□□□□ 0.7
SCARB1-209ENST00000545305 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
SCARB1-209ENST00000545305 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.69
SCARB1-209ENST00000545305 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
SCARB1-209ENST00000545305 SETBP1Q9Y6X0 1596 aa19.38■□□□□ 0.69
SCARB1-209ENST00000545305 SETD1BQ9UPS6 1966 aaKnown RBP19.37■□□□□ 0.69
SCARB1-209ENST00000545305 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
SCARB1-209ENST00000545305 HIRIP3Q9BW71 556 aaPredicted RBP19.36■□□□□ 0.69
SCARB1-209ENST00000545305 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
SCARB1-209ENST00000545305 THEMISQ8N1K5 641 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-209ENST00000545305 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
SCARB1-209ENST00000545305 SLIT1O75093 1534 aa19.35■□□□□ 0.69
SCARB1-209ENST00000545305 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
SCARB1-209ENST00000545305 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
SCARB1-209ENST00000545305 EID1Q9Y6B2 187 aa19.33■□□□□ 0.68
SCARB1-209ENST00000545305 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
SCARB1-209ENST00000545305 ADGRB1O14514 1584 aa19.31■□□□□ 0.68
SCARB1-209ENST00000545305 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
SCARB1-209ENST00000545305 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
SCARB1-209ENST00000545305 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
SCARB1-209ENST00000545305 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
SCARB1-209ENST00000545305 BCANQ96GW7 911 aa19.27■□□□□ 0.68
SCARB1-209ENST00000545305 POLR1AO95602 1720 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-209ENST00000545305 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
SCARB1-209ENST00000545305 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
SCARB1-209ENST00000545305 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
SCARB1-209ENST00000545305 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
SCARB1-209ENST00000545305 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
SCARB1-209ENST00000545305 LTKP29376 864 aa19.23■□□□□ 0.67
SCARB1-209ENST00000545305 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
SCARB1-209ENST00000545305 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
SCARB1-209ENST00000545305 DIP2AQ14689 1571 aa19.22■□□□□ 0.67
SCARB1-209ENST00000545305 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
SCARB1-209ENST00000545305 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
SCARB1-209ENST00000545305 TRAK1Q9UPV9 953 aa19.21■□□□□ 0.67
SCARB1-209ENST00000545305 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
SCARB1-209ENST00000545305 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
SCARB1-209ENST00000545305 WASHC2AQ641Q2 1341 aa19.2■□□□□ 0.66
SCARB1-209ENST00000545305 ADAMTS13Q76LX8 1427 aa19.19■□□□□ 0.66
SCARB1-209ENST00000545305 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
SCARB1-209ENST00000545305 CENPJQ9HC77 1338 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-209ENST00000545305 TMF1P82094 1093 aa19.18■□□□□ 0.66
SCARB1-209ENST00000545305 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
SCARB1-209ENST00000545305 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
SCARB1-209ENST00000545305 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
SCARB1-209ENST00000545305 TESK2Q96S53 571 aa19.17■□□□□ 0.66
SCARB1-209ENST00000545305 STK26Q9P289 416 aa19.17■□□□□ 0.66
SCARB1-209ENST00000545305 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
SCARB1-209ENST00000545305 SBNO2Q9Y2G9 1366 aa19.16■□□□□ 0.66
SCARB1-209ENST00000545305 MED14O60244 1454 aa19.16■□□□□ 0.66
SCARB1-209ENST00000545305 KNDC1Q76NI1 1749 aa19.15■□□□□ 0.66
SCARB1-209ENST00000545305 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-209ENST00000545305 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
SCARB1-209ENST00000545305 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
SCARB1-209ENST00000545305 METP08581 1390 aa19.15■□□□□ 0.66
SCARB1-209ENST00000545305 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
SCARB1-209ENST00000545305 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
SCARB1-209ENST00000545305 ABCC11Q96J66 1382 aa19.13■□□□□ 0.65
SCARB1-209ENST00000545305 NPHP4O75161 1426 aaPredicted RBP19.12■□□□□ 0.65
SCARB1-209ENST00000545305 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
SCARB1-209ENST00000545305 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
SCARB1-209ENST00000545305 CPS1P31327 1500 aa19.11■□□□□ 0.65
SCARB1-209ENST00000545305 POGKQ9P215 609 aa19.11■□□□□ 0.65
SCARB1-209ENST00000545305 TECPR2O15040 1411 aa19.1■□□□□ 0.65
SCARB1-209ENST00000545305 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
SCARB1-209ENST00000545305 PRAM1Q96QH2 718 aa19.09■□□□□ 0.65
SCARB1-209ENST00000545305 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
SCARB1-209ENST00000545305 FAM135BQ49AJ0 1406 aa19.08■□□□□ 0.64
SCARB1-209ENST00000545305 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
SCARB1-209ENST00000545305 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
SCARB1-209ENST00000545305 EVC2Q86UK5 1308 aa19.05■□□□□ 0.64
SCARB1-209ENST00000545305 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
SCARB1-209ENST00000545305 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-209ENST00000545305 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
SCARB1-209ENST00000545305 XRN1Q8IZH2 1706 aaKnown RBP19.04■□□□□ 0.64
SCARB1-209ENST00000545305 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
SCARB1-209ENST00000545305 TULP4Q9NRJ4 1543 aa19.03■□□□□ 0.64
SCARB1-209ENST00000545305 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
SCARB1-209ENST00000545305 HSPA2P54652 639 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms