RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 HSPA1LP34931 641 aa16.63■□□□□ 0.25
SRRM4-203ENST00000545224 CPS1P31327 1500 aa16.63■□□□□ 0.25
SRRM4-203ENST00000545224 ARHGAP23Q9P227 1491 aa16.62■□□□□ 0.25
SRRM4-203ENST00000545224 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
SRRM4-203ENST00000545224 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
SRRM4-203ENST00000545224 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
SRRM4-203ENST00000545224 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
SRRM4-203ENST00000545224 SLIT1O75093 1534 aa16.6■□□□□ 0.25
SRRM4-203ENST00000545224 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
SRRM4-203ENST00000545224 KIF1BO60333 1816 aa16.6■□□□□ 0.25
SRRM4-203ENST00000545224 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
SRRM4-203ENST00000545224 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
SRRM4-203ENST00000545224 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
SRRM4-203ENST00000545224 LTKP29376 864 aa16.57■□□□□ 0.24
SRRM4-203ENST00000545224 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
SRRM4-203ENST00000545224 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
SRRM4-203ENST00000545224 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
SRRM4-203ENST00000545224 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
SRRM4-203ENST00000545224 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
SRRM4-203ENST00000545224 RIMS2Q9UQ26 1411 aa16.54■□□□□ 0.24
SRRM4-203ENST00000545224 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
SRRM4-203ENST00000545224 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
SRRM4-203ENST00000545224 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
SRRM4-203ENST00000545224 IFT172Q9UG01 1749 aa16.52■□□□□ 0.24
SRRM4-203ENST00000545224 PPLO60437 1756 aa16.51■□□□□ 0.23
SRRM4-203ENST00000545224 MED14O60244 1454 aa16.51■□□□□ 0.23
SRRM4-203ENST00000545224 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
SRRM4-203ENST00000545224 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
SRRM4-203ENST00000545224 ZNF326Q5BKZ1 582 aaKnown RBP16.5■□□□□ 0.23
SRRM4-203ENST00000545224 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
SRRM4-203ENST00000545224 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
SRRM4-203ENST00000545224 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
SRRM4-203ENST00000545224 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
SRRM4-203ENST00000545224 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
SRRM4-203ENST00000545224 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
SRRM4-203ENST00000545224 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
SRRM4-203ENST00000545224 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
SRRM4-203ENST00000545224 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
SRRM4-203ENST00000545224 MYOM2P54296 1465 aa16.47■□□□□ 0.23
SRRM4-203ENST00000545224 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
SRRM4-203ENST00000545224 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
SRRM4-203ENST00000545224 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
SRRM4-203ENST00000545224 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
SRRM4-203ENST00000545224 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
SRRM4-203ENST00000545224 STRCP1A6NGW2 1772 aa16.45■□□□□ 0.22
SRRM4-203ENST00000545224 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
SRRM4-203ENST00000545224 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
SRRM4-203ENST00000545224 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
SRRM4-203ENST00000545224 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
SRRM4-203ENST00000545224 PIK3C2GO75747 1445 aa16.43■□□□□ 0.22
SRRM4-203ENST00000545224 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
SRRM4-203ENST00000545224 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
SRRM4-203ENST00000545224 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
SRRM4-203ENST00000545224 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
SRRM4-203ENST00000545224 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
SRRM4-203ENST00000545224 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
SRRM4-203ENST00000545224 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
SRRM4-203ENST00000545224 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
SRRM4-203ENST00000545224 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
SRRM4-203ENST00000545224 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
SRRM4-203ENST00000545224 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
SRRM4-203ENST00000545224 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
SRRM4-203ENST00000545224 DIP2AQ14689 1571 aa16.35■□□□□ 0.21
SRRM4-203ENST00000545224 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
SRRM4-203ENST00000545224 METP08581 1390 aa16.35■□□□□ 0.21
SRRM4-203ENST00000545224 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
SRRM4-203ENST00000545224 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
SRRM4-203ENST00000545224 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
SRRM4-203ENST00000545224 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
SRRM4-203ENST00000545224 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
SRRM4-203ENST00000545224 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
SRRM4-203ENST00000545224 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
SRRM4-203ENST00000545224 LAMC1P11047 1609 aa16.3■□□□□ 0.2
SRRM4-203ENST00000545224 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
SRRM4-203ENST00000545224 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
SRRM4-203ENST00000545224 BCANQ96GW7 911 aa16.3■□□□□ 0.2
SRRM4-203ENST00000545224 CHD2O14647 1828 aaKnown RBP16.3■□□□□ 0.2
SRRM4-203ENST00000545224 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
SRRM4-203ENST00000545224 KCNA6P17658 529 aa16.29■□□□□ 0.2
SRRM4-203ENST00000545224 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
SRRM4-203ENST00000545224 NWD1Q149M9 1564 aa16.28■□□□□ 0.2
SRRM4-203ENST00000545224 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
SRRM4-203ENST00000545224 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
SRRM4-203ENST00000545224 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
SRRM4-203ENST00000545224 XRN1Q8IZH2 1706 aaKnown RBP16.26■□□□□ 0.19
SRRM4-203ENST00000545224 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
SRRM4-203ENST00000545224 TECPR2O15040 1411 aa16.26■□□□□ 0.19
SRRM4-203ENST00000545224 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
SRRM4-203ENST00000545224 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
SRRM4-203ENST00000545224 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
SRRM4-203ENST00000545224 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
SRRM4-203ENST00000545224 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
SRRM4-203ENST00000545224 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
SRRM4-203ENST00000545224 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
SRRM4-203ENST00000545224 ROCK2O75116 1388 aaKnown RBP16.21■□□□□ 0.19
SRRM4-203ENST00000545224 NKTRP30414 1462 aaKnown RBP16.21■□□□□ 0.19
SRRM4-203ENST00000545224 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
SRRM4-203ENST00000545224 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
SRRM4-203ENST00000545224 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
SRRM4-203ENST00000545224 STK26Q9P289 416 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms