RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
TMEM258-208ENST00000545210 MSH6P52701 1360 aa18.08■□□□□ 0.49
TMEM258-208ENST00000545210 BCANQ96GW7 911 aa18.08■□□□□ 0.48
TMEM258-208ENST00000545210 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
TMEM258-208ENST00000545210 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
TMEM258-208ENST00000545210 COL16A1Q07092 1604 aaPredicted RBP18.06■□□□□ 0.48
TMEM258-208ENST00000545210 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
TMEM258-208ENST00000545210 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
TMEM258-208ENST00000545210 JCADQ9P266 1359 aa18.04■□□□□ 0.48
TMEM258-208ENST00000545210 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
TMEM258-208ENST00000545210 ZFYVE9O95405 1425 aa18.03■□□□□ 0.48
TMEM258-208ENST00000545210 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.01■□□□□ 0.47
TMEM258-208ENST00000545210 APLP2Q06481 763 aa18.01■□□□□ 0.47
TMEM258-208ENST00000545210 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
TMEM258-208ENST00000545210 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
TMEM258-208ENST00000545210 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
TMEM258-208ENST00000545210 LRP6O75581 1613 aa17.99■□□□□ 0.47
TMEM258-208ENST00000545210 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
TMEM258-208ENST00000545210 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
TMEM258-208ENST00000545210 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
TMEM258-208ENST00000545210 E9PCH4 1651 aa17.96■□□□□ 0.47
TMEM258-208ENST00000545210 AHDC1Q5TGY3 1603 aaPredicted RBP17.95■□□□□ 0.46
TMEM258-208ENST00000545210 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
TMEM258-208ENST00000545210 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
TMEM258-208ENST00000545210 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
TMEM258-208ENST00000545210 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
TMEM258-208ENST00000545210 TBX22Q9Y458 520 aa17.94■□□□□ 0.46
TMEM258-208ENST00000545210 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
TMEM258-208ENST00000545210 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
TMEM258-208ENST00000545210 UNC13BO14795 1591 aa17.93■□□□□ 0.46
TMEM258-208ENST00000545210 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
TMEM258-208ENST00000545210 NUTM2DQ5VT03 806 aaPredicted RBP17.92■□□□□ 0.46
TMEM258-208ENST00000545210 ADAMTS13Q76LX8 1427 aa17.91■□□□□ 0.46
TMEM258-208ENST00000545210 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
TMEM258-208ENST00000545210 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
TMEM258-208ENST00000545210 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
TMEM258-208ENST00000545210 ZNF772Q68DY9 489 aaPredicted RBP17.9■□□□□ 0.46
TMEM258-208ENST00000545210 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
TMEM258-208ENST00000545210 ATF3P18847 181 aa17.89■□□□□ 0.45
TMEM258-208ENST00000545210 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMEM258-208ENST00000545210 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMEM258-208ENST00000545210 C19orf44Q9H6X5 657 aa17.89■□□□□ 0.45
TMEM258-208ENST00000545210 TRPM2O94759 1503 aa17.88■□□□□ 0.45
TMEM258-208ENST00000545210 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
TMEM258-208ENST00000545210 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
TMEM258-208ENST00000545210 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
TMEM258-208ENST00000545210 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
TMEM258-208ENST00000545210 NHSL1Q5SYE7 1610 aa17.85■□□□□ 0.45
TMEM258-208ENST00000545210 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
TMEM258-208ENST00000545210 XRN1Q8IZH2 1706 aaKnown RBP17.84■□□□□ 0.45
TMEM258-208ENST00000545210 PTPRUQ92729 1446 aa17.84■□□□□ 0.45
TMEM258-208ENST00000545210 RXRBP28702 533 aa17.84■□□□□ 0.45
TMEM258-208ENST00000545210 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
TMEM258-208ENST00000545210 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
TMEM258-208ENST00000545210 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
TMEM258-208ENST00000545210 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
TMEM258-208ENST00000545210 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
TMEM258-208ENST00000545210 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
TMEM258-208ENST00000545210 DCCP43146 1447 aa17.8■□□□□ 0.44
TMEM258-208ENST00000545210 AFF2P51816 1311 aa17.79■□□□□ 0.44
TMEM258-208ENST00000545210 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
TMEM258-208ENST00000545210 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
TMEM258-208ENST00000545210 SETD5Q9C0A6 1442 aa17.78■□□□□ 0.44
TMEM258-208ENST00000545210 MST1RQ04912 1400 aa17.77■□□□□ 0.44
TMEM258-208ENST00000545210 NUP155O75694 1391 aa17.75■□□□□ 0.43
TMEM258-208ENST00000545210 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
TMEM258-208ENST00000545210 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
TMEM258-208ENST00000545210 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
TMEM258-208ENST00000545210 RGS12O14924 1447 aa17.72■□□□□ 0.43
TMEM258-208ENST00000545210 METP08581 1390 aa17.72■□□□□ 0.43
TMEM258-208ENST00000545210 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
TMEM258-208ENST00000545210 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
TMEM258-208ENST00000545210 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
TMEM258-208ENST00000545210 KIF1BO60333 1816 aa17.7■□□□□ 0.42
TMEM258-208ENST00000545210 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
TMEM258-208ENST00000545210 ZNF326Q5BKZ1 582 aaKnown RBP17.7■□□□□ 0.42
TMEM258-208ENST00000545210 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
TMEM258-208ENST00000545210 LAMC1P11047 1609 aa17.69■□□□□ 0.42
TMEM258-208ENST00000545210 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
TMEM258-208ENST00000545210 NEXMIFQ5QGS0 1516 aa17.68■□□□□ 0.42
TMEM258-208ENST00000545210 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
TMEM258-208ENST00000545210 ITGAEP38570 1179 aa17.67■□□□□ 0.42
TMEM258-208ENST00000545210 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
TMEM258-208ENST00000545210 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
TMEM258-208ENST00000545210 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
TMEM258-208ENST00000545210 EP400Q96L91 3159 aa17.63■□□□□ 0.41
TMEM258-208ENST00000545210 MARF1Q9Y4F3 1742 aaKnown RBP17.62■□□□□ 0.41
TMEM258-208ENST00000545210 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
TMEM258-208ENST00000545210 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
TMEM258-208ENST00000545210 ORAI2Q96SN7 254 aa17.59■□□□□ 0.41
TMEM258-208ENST00000545210 PTCH1Q13635 1447 aa17.58■□□□□ 0.41
TMEM258-208ENST00000545210 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
TMEM258-208ENST00000545210 USP21Q9UK80 565 aa17.58■□□□□ 0.4
TMEM258-208ENST00000545210 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
TMEM258-208ENST00000545210 PPLO60437 1756 aa17.56■□□□□ 0.4
TMEM258-208ENST00000545210 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
TMEM258-208ENST00000545210 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-208ENST00000545210 ATRNO75882 1429 aa17.54■□□□□ 0.4
TMEM258-208ENST00000545210 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
TMEM258-208ENST00000545210 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms