RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 MSH5O43196 834 aa10.02□□□□□ -0.81
HMGCS2-204ENST00000544913 DIEXFQ68CQ4 756 aaKnown RBP10.02□□□□□ -0.81
HMGCS2-204ENST00000544913 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.81
HMGCS2-204ENST00000544913 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.81
HMGCS2-204ENST00000544913 ZFYVE9O95405 1425 aa10.02□□□□□ -0.81
HMGCS2-204ENST00000544913 MYO3AQ8NEV4 1616 aa10.01□□□□□ -0.81
HMGCS2-204ENST00000544913 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
HMGCS2-204ENST00000544913 PTPRMP28827 1452 aa10.01□□□□□ -0.81
HMGCS2-204ENST00000544913 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
HMGCS2-204ENST00000544913 PIK3C2GO75747 1445 aa10□□□□□ -0.81
HMGCS2-204ENST00000544913 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
HMGCS2-204ENST00000544913 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
HMGCS2-204ENST00000544913 LAMC1P11047 1609 aa9.99□□□□□ -0.81
HMGCS2-204ENST00000544913 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
HMGCS2-204ENST00000544913 ZNF142P52746 1687 aaPredicted RBP9.98□□□□□ -0.81
HMGCS2-204ENST00000544913 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
HMGCS2-204ENST00000544913 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
HMGCS2-204ENST00000544913 ADGRB1O14514 1584 aa9.98□□□□□ -0.81
HMGCS2-204ENST00000544913 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 ASXL1Q8IXJ9 1541 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 NRXN3Q9Y4C0 1643 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 SLIT1O75093 1534 aa9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
HMGCS2-204ENST00000544913 SETD1AO15047 1707 aaKnown RBP9.96□□□□□ -0.81
HMGCS2-204ENST00000544913 CHGAP10645 457 aaKnown RBP9.96□□□□□ -0.81
HMGCS2-204ENST00000544913 ZNF326Q5BKZ1 582 aaKnown RBP9.96□□□□□ -0.81
HMGCS2-204ENST00000544913 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
HMGCS2-204ENST00000544913 TMEM2Q9UHN6 1383 aa9.96□□□□□ -0.82
HMGCS2-204ENST00000544913 IQGAP1P46940 1657 aa9.95□□□□□ -0.82
HMGCS2-204ENST00000544913 SETBP1Q9Y6X0 1596 aa9.94□□□□□ -0.82
HMGCS2-204ENST00000544913 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
HMGCS2-204ENST00000544913 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
HMGCS2-204ENST00000544913 ROCK2O75116 1388 aaKnown RBP9.93□□□□□ -0.82
HMGCS2-204ENST00000544913 USP47Q96K76 1375 aa9.93□□□□□ -0.82
HMGCS2-204ENST00000544913 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
HMGCS2-204ENST00000544913 CFAP70Q5T0N1 1121 aa9.93□□□□□ -0.82
HMGCS2-204ENST00000544913 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
HMGCS2-204ENST00000544913 HIRIP3Q9BW71 556 aaPredicted RBP9.92□□□□□ -0.82
HMGCS2-204ENST00000544913 ALKQ9UM73 1620 aa9.92□□□□□ -0.82
HMGCS2-204ENST00000544913 MED14O60244 1454 aa9.92□□□□□ -0.82
HMGCS2-204ENST00000544913 LTKP29376 864 aa9.92□□□□□ -0.82
HMGCS2-204ENST00000544913 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
HMGCS2-204ENST00000544913 ADAMTS13Q76LX8 1427 aa9.91□□□□□ -0.82
HMGCS2-204ENST00000544913 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
HMGCS2-204ENST00000544913 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
HMGCS2-204ENST00000544913 SCAF11Q99590 1463 aaKnown RBP9.9□□□□□ -0.82
HMGCS2-204ENST00000544913 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.83
HMGCS2-204ENST00000544913 EIF4G2P78344 907 aaKnown RBP eCLIP9.9□□□□□ -0.83
HMGCS2-204ENST00000544913 PLEKHG1Q9ULL1 1385 aa9.89□□□□□ -0.83
HMGCS2-204ENST00000544913 TESK2Q96S53 571 aa9.88□□□□□ -0.83
HMGCS2-204ENST00000544913 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
HMGCS2-204ENST00000544913 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
HMGCS2-204ENST00000544913 METP08581 1390 aa9.87□□□□□ -0.83
HMGCS2-204ENST00000544913 ST20-MTHFSA0A0A6YYL1 179 aa9.87□□□□□ -0.83
HMGCS2-204ENST00000544913 TMEM132EQ6IEE7 984 aa9.87□□□□□ -0.83
HMGCS2-204ENST00000544913 WASHC2AQ641Q2 1341 aa9.87□□□□□ -0.83
HMGCS2-204ENST00000544913 LMTK3Q96Q04 1460 aa9.86□□□□□ -0.83
HMGCS2-204ENST00000544913 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGCS2-204ENST00000544913 POLR1AO95602 1720 aaPredicted RBP9.86□□□□□ -0.83
HMGCS2-204ENST00000544913 THEMISQ8N1K5 641 aaPredicted RBP9.86□□□□□ -0.83
HMGCS2-204ENST00000544913 TECPR2O15040 1411 aa9.85□□□□□ -0.83
HMGCS2-204ENST00000544913 YTHDC2Q9H6S0 1430 aaKnown RBP9.85□□□□□ -0.83
HMGCS2-204ENST00000544913 PTPRUQ92729 1446 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 DLC1Q96QB1 1528 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 CCDC7Q96M83 1385 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 DISP3Q9P2K9 1392 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 SBNO2Q9Y2G9 1366 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 KNDC1Q76NI1 1749 aa9.84□□□□□ -0.83
HMGCS2-204ENST00000544913 DIP2AQ14689 1571 aa9.83□□□□□ -0.84
HMGCS2-204ENST00000544913 LRPPRCP42704 1394 aaKnown RBP9.83□□□□□ -0.84
HMGCS2-204ENST00000544913 CPS1P31327 1500 aa9.82□□□□□ -0.84
HMGCS2-204ENST00000544913 QRICH2Q9H0J4 1663 aa9.82□□□□□ -0.84
HMGCS2-204ENST00000544913 ABCC11Q96J66 1382 aa9.82□□□□□ -0.84
HMGCS2-204ENST00000544913 XRN1Q8IZH2 1706 aaKnown RBP9.82□□□□□ -0.84
HMGCS2-204ENST00000544913 TRAK1Q9UPV9 953 aa9.81□□□□□ -0.84
HMGCS2-204ENST00000544913 TULP4Q9NRJ4 1543 aa9.81□□□□□ -0.84
HMGCS2-204ENST00000544913 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 EID1Q9Y6B2 187 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 EIF3AQ14152 1382 aaKnown RBP9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 PLEKHH1Q9ULM0 1364 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 NPHP4O75161 1426 aaPredicted RBP9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 STRCQ7RTU9 1775 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 SLC26A8Q96RN1 970 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 ROBO2Q9HCK4 1378 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
HMGCS2-204ENST00000544913 CENPJQ9HC77 1338 aaPredicted RBP9.79□□□□□ -0.84
HMGCS2-204ENST00000544913 MYOM1P52179 1685 aa9.79□□□□□ -0.84
HMGCS2-204ENST00000544913 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 HSPA2P54652 639 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 PTCH1Q13635 1447 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 NCKAP5LQ9HCH0 1330 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 STK26Q9P289 416 aa9.78□□□□□ -0.84
HMGCS2-204ENST00000544913 PIK3R4Q99570 1358 aa9.77□□□□□ -0.85
HMGCS2-204ENST00000544913 NWD1Q149M9 1564 aa9.77□□□□□ -0.85
HMGCS2-204ENST00000544913 CHD2O14647 1828 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms