RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 TET3O43151 1660 aa21.42■■□□□ 1.02
PHC1-213ENST00000544539 NKTRP30414 1462 aaKnown RBP21.42■■□□□ 1.02
PHC1-213ENST00000544539 ROCK1Q13464 1354 aa21.41■■□□□ 1.02
PHC1-213ENST00000544539 MSH6P52701 1360 aa21.4■■□□□ 1.02
PHC1-213ENST00000544539 PLEKHG1Q9ULL1 1385 aa21.39■■□□□ 1.02
PHC1-213ENST00000544539 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
PHC1-213ENST00000544539 GCC2Q8IWJ2 1684 aa21.38■■□□□ 1.01
PHC1-213ENST00000544539 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
PHC1-213ENST00000544539 RIMS2Q9UQ26 1411 aa21.37■■□□□ 1.01
PHC1-213ENST00000544539 UNC13BO14795 1591 aa21.36■■□□□ 1.01
PHC1-213ENST00000544539 TBX22Q9Y458 520 aa21.35■■□□□ 1.01
PHC1-213ENST00000544539 NWD1Q149M9 1564 aa21.35■■□□□ 1.01
PHC1-213ENST00000544539 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
PHC1-213ENST00000544539 NCOA3Q9Y6Q9 1424 aa21.33■■□□□ 1.01
PHC1-213ENST00000544539 TMEM131LA2VDJ0 1609 aa21.31■■□□□ 1
PHC1-213ENST00000544539 C14orf37Q86TY3 774 aa21.31■■□□□ 1
PHC1-213ENST00000544539 SLAIN2Q9P270 581 aa21.31■■□□□ 1
PHC1-213ENST00000544539 NUP155O75694 1391 aa21.31■■□□□ 1
PHC1-213ENST00000544539 PIK3R4Q99570 1358 aa21.3■■□□□ 1
PHC1-213ENST00000544539 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
PHC1-213ENST00000544539 ITGAEP38570 1179 aa21.29■■□□□ 1
PHC1-213ENST00000544539 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
PHC1-213ENST00000544539 IQGAP3Q86VI3 1631 aa21.29■■□□□ 1
PHC1-213ENST00000544539 DIP2AQ14689 1571 aa21.27■■□□□ 1
PHC1-213ENST00000544539 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
PHC1-213ENST00000544539 E9PCH4 1651 aa21.26■□□□□ 0.99
PHC1-213ENST00000544539 CADPS2Q86UW7 1296 aa21.26■□□□□ 0.99
PHC1-213ENST00000544539 MYO5BQ9ULV0 1848 aa21.26■□□□□ 0.99
PHC1-213ENST00000544539 ATF3P18847 181 aa21.25■□□□□ 0.99
PHC1-213ENST00000544539 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
PHC1-213ENST00000544539 JCADQ9P266 1359 aa21.23■□□□□ 0.99
PHC1-213ENST00000544539 TRPM2O94759 1503 aa21.21■□□□□ 0.99
PHC1-213ENST00000544539 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
PHC1-213ENST00000544539 NUTM2DQ5VT03 806 aaPredicted RBP21.2■□□□□ 0.98
PHC1-213ENST00000544539 PHLPP1O60346 1717 aa21.19■□□□□ 0.98
PHC1-213ENST00000544539 ADAMTS13Q76LX8 1427 aa21.19■□□□□ 0.98
PHC1-213ENST00000544539 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
PHC1-213ENST00000544539 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
PHC1-213ENST00000544539 SPATA31A6Q5VVP1 1343 aa21.15■□□□□ 0.98
PHC1-213ENST00000544539 MEX3CQ5U5Q3 659 aaKnown RBP21.13■□□□□ 0.97
PHC1-213ENST00000544539 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
PHC1-213ENST00000544539 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
PHC1-213ENST00000544539 DCCP43146 1447 aa21.12■□□□□ 0.97
PHC1-213ENST00000544539 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
PHC1-213ENST00000544539 POTEAQ6S8J7 498 aa21.1■□□□□ 0.97
PHC1-213ENST00000544539 ZNF772Q68DY9 489 aaPredicted RBP21.09■□□□□ 0.97
PHC1-213ENST00000544539 SETBP1Q9Y6X0 1596 aa21.09■□□□□ 0.97
PHC1-213ENST00000544539 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
PHC1-213ENST00000544539 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
PHC1-213ENST00000544539 RRBP1Q9P2E9 1410 aaKnown RBP21.06■□□□□ 0.96
PHC1-213ENST00000544539 VGFO15240 615 aaPredicted RBP21.05■□□□□ 0.96
PHC1-213ENST00000544539 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
PHC1-213ENST00000544539 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
PHC1-213ENST00000544539 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
PHC1-213ENST00000544539 NAIPQ13075 1403 aa21.02■□□□□ 0.96
PHC1-213ENST00000544539 KIF1BO60333 1816 aa21.01■□□□□ 0.95
PHC1-213ENST00000544539 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
PHC1-213ENST00000544539 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
PHC1-213ENST00000544539 XRN1Q8IZH2 1706 aaKnown RBP21.01■□□□□ 0.95
PHC1-213ENST00000544539 METP08581 1390 aa21■□□□□ 0.95
PHC1-213ENST00000544539 SHPRHQ149N8 1683 aa21■□□□□ 0.95
PHC1-213ENST00000544539 NRXN3Q9Y4C0 1643 aa21■□□□□ 0.95
PHC1-213ENST00000544539 CLTCL1P53675 1640 aa20.98■□□□□ 0.95
PHC1-213ENST00000544539 SLC4A1APQ9BWU0 796 aaKnown RBP20.98■□□□□ 0.95
PHC1-213ENST00000544539 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
PHC1-213ENST00000544539 ADGRL3Q9HAR2 1447 aa20.97■□□□□ 0.95
PHC1-213ENST00000544539 ASXL1Q8IXJ9 1541 aa20.97■□□□□ 0.95
PHC1-213ENST00000544539 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
PHC1-213ENST00000544539 MST1RQ04912 1400 aa20.96■□□□□ 0.95
PHC1-213ENST00000544539 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
PHC1-213ENST00000544539 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
PHC1-213ENST00000544539 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
PHC1-213ENST00000544539 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.95
PHC1-213ENST00000544539 LRP6O75581 1613 aa20.94■□□□□ 0.94
PHC1-213ENST00000544539 RXRBP28702 533 aa20.94■□□□□ 0.94
PHC1-213ENST00000544539 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
PHC1-213ENST00000544539 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
PHC1-213ENST00000544539 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.93
PHC1-213ENST00000544539 AFF2P51816 1311 aa20.87■□□□□ 0.93
PHC1-213ENST00000544539 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
PHC1-213ENST00000544539 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
PHC1-213ENST00000544539 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
PHC1-213ENST00000544539 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
PHC1-213ENST00000544539 PRAG1Q86YV5 1406 aa20.85■□□□□ 0.93
PHC1-213ENST00000544539 C8orf37Q96NL8 207 aa20.84■□□□□ 0.93
PHC1-213ENST00000544539 SETD1AO15047 1707 aaKnown RBP20.84■□□□□ 0.93
PHC1-213ENST00000544539 PNPLA6Q8IY17 1366 aa20.84■□□□□ 0.93
PHC1-213ENST00000544539 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
PHC1-213ENST00000544539 RBM6P78332 1123 aaKnown RBP20.81■□□□□ 0.92
PHC1-213ENST00000544539 NGLY1Q96IV0 654 aa20.81■□□□□ 0.92
PHC1-213ENST00000544539 ANKRD30BQ9BXX2 1392 aa20.81■□□□□ 0.92
PHC1-213ENST00000544539 UPF1Q92900 1129 aaKnown RBP eCLIP20.8■□□□□ 0.92
PHC1-213ENST00000544539 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
PHC1-213ENST00000544539 PPLO60437 1756 aa20.8■□□□□ 0.92
PHC1-213ENST00000544539 DDX17Q92841 729 aaKnown RBP20.79■□□□□ 0.92
PHC1-213ENST00000544539 LRPPRCP42704 1394 aaKnown RBP20.79■□□□□ 0.92
PHC1-213ENST00000544539 SOS2Q07890 1332 aaPredicted RBP20.78■□□□□ 0.92
PHC1-213ENST00000544539 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
PHC1-213ENST00000544539 ADAMTS2O95450 1211 aa20.77■□□□□ 0.92
PHC1-213ENST00000544539 RGL3Q3MIN7 710 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms