RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 LTKP29376 864 aa19.86■□□□□ 0.77
SP140-213ENST00000543928 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
SP140-213ENST00000543928 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
SP140-213ENST00000543928 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
SP140-213ENST00000543928 NEURL4Q96JN8 1562 aa19.84■□□□□ 0.77
SP140-213ENST00000543928 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
SP140-213ENST00000543928 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
SP140-213ENST00000543928 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
SP140-213ENST00000543928 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.83■□□□□ 0.77
SP140-213ENST00000543928 NEXMIFQ5QGS0 1516 aa19.82■□□□□ 0.76
SP140-213ENST00000543928 RPGRIP1LQ68CZ1 1315 aa19.82■□□□□ 0.76
SP140-213ENST00000543928 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
SP140-213ENST00000543928 MED14O60244 1454 aa19.8■□□□□ 0.76
SP140-213ENST00000543928 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
SP140-213ENST00000543928 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
SP140-213ENST00000543928 CCER1Q8TC90 406 aaPredicted RBP19.79■□□□□ 0.76
SP140-213ENST00000543928 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
SP140-213ENST00000543928 PPLO60437 1756 aa19.78■□□□□ 0.76
SP140-213ENST00000543928 PLEKHG1Q9ULL1 1385 aa19.77■□□□□ 0.76
SP140-213ENST00000543928 IQGAP1P46940 1657 aa19.77■□□□□ 0.76
SP140-213ENST00000543928 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
SP140-213ENST00000543928 BCANQ96GW7 911 aa19.76■□□□□ 0.75
SP140-213ENST00000543928 IFT172Q9UG01 1749 aa19.75■□□□□ 0.75
SP140-213ENST00000543928 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
SP140-213ENST00000543928 DCAF11Q8TEB1 546 aa19.72■□□□□ 0.75
SP140-213ENST00000543928 ADGRF5Q8IZF2 1346 aa19.72■□□□□ 0.75
SP140-213ENST00000543928 SLC26A8Q96RN1 970 aa19.71■□□□□ 0.75
SP140-213ENST00000543928 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
SP140-213ENST00000543928 MYOM2P54296 1465 aa19.7■□□□□ 0.74
SP140-213ENST00000543928 ADAMTS13Q76LX8 1427 aa19.69■□□□□ 0.74
SP140-213ENST00000543928 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
SP140-213ENST00000543928 SETBP1Q9Y6X0 1596 aa19.69■□□□□ 0.74
SP140-213ENST00000543928 NRXN3Q9Y4C0 1643 aa19.69■□□□□ 0.74
SP140-213ENST00000543928 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
SP140-213ENST00000543928 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
SP140-213ENST00000543928 NRXN1Q9ULB1 1477 aa19.67■□□□□ 0.74
SP140-213ENST00000543928 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
SP140-213ENST00000543928 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
SP140-213ENST00000543928 DIP2AQ14689 1571 aa19.65■□□□□ 0.74
SP140-213ENST00000543928 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
SP140-213ENST00000543928 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
SP140-213ENST00000543928 METP08581 1390 aa19.6■□□□□ 0.73
SP140-213ENST00000543928 C14orf93Q9H972 538 aaKnown RBP19.6■□□□□ 0.73
SP140-213ENST00000543928 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
SP140-213ENST00000543928 SETD1AO15047 1707 aaKnown RBP19.59■□□□□ 0.73
SP140-213ENST00000543928 CFAP70Q5T0N1 1121 aa19.59■□□□□ 0.73
SP140-213ENST00000543928 PIK3R4Q99570 1358 aa19.58■□□□□ 0.73
SP140-213ENST00000543928 KCNA6P17658 529 aa19.57■□□□□ 0.72
SP140-213ENST00000543928 LAMC1P11047 1609 aa19.57■□□□□ 0.72
SP140-213ENST00000543928 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
SP140-213ENST00000543928 LTBP4Q8N2S1 1624 aa19.56■□□□□ 0.72
SP140-213ENST00000543928 TIMELESSQ9UNS1 1208 aa19.56■□□□□ 0.72
SP140-213ENST00000543928 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
SP140-213ENST00000543928 PTPRUQ92729 1446 aa19.56■□□□□ 0.72
SP140-213ENST00000543928 NWD1Q149M9 1564 aa19.55■□□□□ 0.72
SP140-213ENST00000543928 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
SP140-213ENST00000543928 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
SP140-213ENST00000543928 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
SP140-213ENST00000543928 CPS1P31327 1500 aa19.52■□□□□ 0.72
SP140-213ENST00000543928 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
SP140-213ENST00000543928 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
SP140-213ENST00000543928 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
SP140-213ENST00000543928 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
SP140-213ENST00000543928 ADGRB1O14514 1584 aa19.5■□□□□ 0.71
SP140-213ENST00000543928 LRPPRCP42704 1394 aaKnown RBP19.49■□□□□ 0.71
SP140-213ENST00000543928 ADRA2BP18089 450 aa19.49■□□□□ 0.71
SP140-213ENST00000543928 NBPF1Q3BBV0 1214 aa19.49■□□□□ 0.71
SP140-213ENST00000543928 STK26Q9P289 416 aa19.49■□□□□ 0.71
SP140-213ENST00000543928 YTHDC2Q9H6S0 1430 aaKnown RBP19.49■□□□□ 0.71
SP140-213ENST00000543928 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
SP140-213ENST00000543928 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
SP140-213ENST00000543928 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
SP140-213ENST00000543928 LRRC7Q96NW7 1537 aa19.47■□□□□ 0.71
SP140-213ENST00000543928 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
SP140-213ENST00000543928 TMEM94Q12767 1356 aa19.45■□□□□ 0.7
SP140-213ENST00000543928 TECPR2O15040 1411 aa19.45■□□□□ 0.7
SP140-213ENST00000543928 RBM33Q96EV2 1170 aaKnown RBP19.45■□□□□ 0.7
SP140-213ENST00000543928 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
SP140-213ENST00000543928 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
SP140-213ENST00000543928 PTCH1Q13635 1447 aa19.44■□□□□ 0.7
SP140-213ENST00000543928 CERKQ8TCT0 537 aa19.44■□□□□ 0.7
SP140-213ENST00000543928 KNDC1Q76NI1 1749 aa19.44■□□□□ 0.7
SP140-213ENST00000543928 RALGAPBQ86X10 1494 aa19.43■□□□□ 0.7
SP140-213ENST00000543928 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
SP140-213ENST00000543928 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
SP140-213ENST00000543928 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
SP140-213ENST00000543928 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
SP140-213ENST00000543928 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
SP140-213ENST00000543928 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
SP140-213ENST00000543928 SIRT1Q96EB6 747 aa19.39■□□□□ 0.69
SP140-213ENST00000543928 FAM135BQ49AJ0 1406 aa19.39■□□□□ 0.69
SP140-213ENST00000543928 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
SP140-213ENST00000543928 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
SP140-213ENST00000543928 PLEKHH1Q9ULM0 1364 aa19.38■□□□□ 0.69
SP140-213ENST00000543928 NCOA3Q9Y6Q9 1424 aa19.38■□□□□ 0.69
SP140-213ENST00000543928 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
SP140-213ENST00000543928 POGKQ9P215 609 aa19.36■□□□□ 0.69
SP140-213ENST00000543928 ARHGEF28Q8N1W1 1705 aaKnown RBP19.36■□□□□ 0.69
SP140-213ENST00000543928 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
SP140-213ENST00000543928 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms