RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZMYM4Q5VZL5 1548 aa23.29■■□□□ 1.32
PTPRO-209ENST00000543886 CFAP65Q6ZU64 1925 aaKnown RBP23.28■■□□□ 1.32
PTPRO-209ENST00000543886 EIF3AQ14152 1382 aaKnown RBP23.28■■□□□ 1.32
PTPRO-209ENST00000543886 TSPOAP1O95153 1857 aa23.27■■□□□ 1.32
PTPRO-209ENST00000543886 RALBP1Q15311 655 aa23.26■■□□□ 1.31
PTPRO-209ENST00000543886 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
PTPRO-209ENST00000543886 NRXN1Q9ULB1 1477 aa23.24■■□□□ 1.31
PTPRO-209ENST00000543886 ADGRF5Q8IZF2 1346 aa23.24■■□□□ 1.31
PTPRO-209ENST00000543886 SIGLEC1Q9BZZ2 1709 aa23.23■■□□□ 1.31
PTPRO-209ENST00000543886 NOS1P29475 1434 aa23.22■■□□□ 1.31
PTPRO-209ENST00000543886 PPLO60437 1756 aa23.22■■□□□ 1.31
PTPRO-209ENST00000543886 NEFLP07196 543 aa23.22■■□□□ 1.31
PTPRO-209ENST00000543886 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
PTPRO-209ENST00000543886 ARHGAP31Q2M1Z3 1444 aa23.21■■□□□ 1.31
PTPRO-209ENST00000543886 CDCA8Q53HL2 280 aa23.2■■□□□ 1.3
PTPRO-209ENST00000543886 CFAP70Q5T0N1 1121 aa23.2■■□□□ 1.3
PTPRO-209ENST00000543886 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
PTPRO-209ENST00000543886 PIK3C2BO00750 1634 aa23.19■■□□□ 1.3
PTPRO-209ENST00000543886 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
PTPRO-209ENST00000543886 SYNMO15061 1565 aa23.18■■□□□ 1.3
PTPRO-209ENST00000543886 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
PTPRO-209ENST00000543886 RPGRIP1LQ68CZ1 1315 aa23.17■■□□□ 1.3
PTPRO-209ENST00000543886 PER1O15534 1290 aaPredicted RBP23.17■■□□□ 1.3
PTPRO-209ENST00000543886 PANK3Q9H999 370 aa23.17■■□□□ 1.3
PTPRO-209ENST00000543886 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
PTPRO-209ENST00000543886 FKBP8Q14318 412 aa23.17■■□□□ 1.3
PTPRO-209ENST00000543886 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
PTPRO-209ENST00000543886 PIK3C2GO75747 1445 aa23.14■■□□□ 1.29
PTPRO-209ENST00000543886 REREQ9P2R6 1566 aa23.13■■□□□ 1.29
PTPRO-209ENST00000543886 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
PTPRO-209ENST00000543886 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
PTPRO-209ENST00000543886 KDM5AP29375 1690 aaKnown RBP23.12■■□□□ 1.29
PTPRO-209ENST00000543886 NLRP13Q86W25 1043 aa23.11■■□□□ 1.29
PTPRO-209ENST00000543886 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
PTPRO-209ENST00000543886 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
PTPRO-209ENST00000543886 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
PTPRO-209ENST00000543886 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
PTPRO-209ENST00000543886 MYOM1P52179 1685 aa23.08■■□□□ 1.28
PTPRO-209ENST00000543886 AGLP35573 1532 aa23.08■■□□□ 1.28
PTPRO-209ENST00000543886 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
PTPRO-209ENST00000543886 SLC52A1Q9NWF4 448 aa23.07■■□□□ 1.28
PTPRO-209ENST00000543886 NEXMIFQ5QGS0 1516 aa23.07■■□□□ 1.28
PTPRO-209ENST00000543886 LRPPRCP42704 1394 aaKnown RBP23.06■■□□□ 1.28
PTPRO-209ENST00000543886 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
PTPRO-209ENST00000543886 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
PTPRO-209ENST00000543886 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
PTPRO-209ENST00000543886 IDI1Q13907 227 aa23.04■■□□□ 1.28
PTPRO-209ENST00000543886 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
PTPRO-209ENST00000543886 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
PTPRO-209ENST00000543886 BCANQ96GW7 911 aa23.03■■□□□ 1.28
PTPRO-209ENST00000543886 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
PTPRO-209ENST00000543886 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
PTPRO-209ENST00000543886 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
PTPRO-209ENST00000543886 QRICH2Q9H0J4 1663 aa23■■□□□ 1.27
PTPRO-209ENST00000543886 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
PTPRO-209ENST00000543886 MYO5BQ9ULV0 1848 aa23■■□□□ 1.27
PTPRO-209ENST00000543886 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
PTPRO-209ENST00000543886 CLTCQ00610 1675 aaKnown RBP22.99■■□□□ 1.27
PTPRO-209ENST00000543886 TRAK1Q9UPV9 953 aa22.99■■□□□ 1.27
PTPRO-209ENST00000543886 NUTM2DQ5VT03 806 aaPredicted RBP22.98■■□□□ 1.27
PTPRO-209ENST00000543886 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
PTPRO-209ENST00000543886 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
PTPRO-209ENST00000543886 SMG6Q86US8 1419 aaKnown RBP22.96■■□□□ 1.27
PTPRO-209ENST00000543886 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
PTPRO-209ENST00000543886 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
PTPRO-209ENST00000543886 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
PTPRO-209ENST00000543886 ARHGEF28Q8N1W1 1705 aaKnown RBP22.92■■□□□ 1.26
PTPRO-209ENST00000543886 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
PTPRO-209ENST00000543886 MLECQ14165 292 aa22.89■■□□□ 1.26
PTPRO-209ENST00000543886 INSRP06213 1382 aa22.89■■□□□ 1.26
PTPRO-209ENST00000543886 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.26
PTPRO-209ENST00000543886 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
PTPRO-209ENST00000543886 PPP2R1AP30153 589 aa22.88■■□□□ 1.25
PTPRO-209ENST00000543886 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
PTPRO-209ENST00000543886 IRX6P78412 446 aaPredicted RBP22.87■■□□□ 1.25
PTPRO-209ENST00000543886 BLMP54132 1417 aaPredicted RBP22.85■■□□□ 1.25
PTPRO-209ENST00000543886 ERICH6BQ5W0A0 696 aa22.85■■□□□ 1.25
PTPRO-209ENST00000543886 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
PTPRO-209ENST00000543886 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
PTPRO-209ENST00000543886 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
PTPRO-209ENST00000543886 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
PTPRO-209ENST00000543886 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
PTPRO-209ENST00000543886 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
PTPRO-209ENST00000543886 PUS7Q96PZ0 661 aaKnown RBP22.8■■□□□ 1.24
PTPRO-209ENST00000543886 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPRO-209ENST00000543886 ALKQ9UM73 1620 aa22.78■■□□□ 1.24
PTPRO-209ENST00000543886 STK26Q9P289 416 aa22.78■■□□□ 1.24
PTPRO-209ENST00000543886 NSD3Q9BZ95 1437 aa22.78■■□□□ 1.24
PTPRO-209ENST00000543886 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
PTPRO-209ENST00000543886 YTHDC2Q9H6S0 1430 aaKnown RBP22.77■■□□□ 1.24
PTPRO-209ENST00000543886 SLC12A5Q9H2X9 1139 aa22.77■■□□□ 1.23
PTPRO-209ENST00000543886 SALL2Q9Y467 1007 aaPredicted RBP22.76■■□□□ 1.23
PTPRO-209ENST00000543886 PTPRMP28827 1452 aa22.76■■□□□ 1.23
PTPRO-209ENST00000543886 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
PTPRO-209ENST00000543886 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
PTPRO-209ENST00000543886 RIMS2Q9UQ26 1411 aa22.75■■□□□ 1.23
PTPRO-209ENST00000543886 SAFB2Q14151 953 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTPRO-209ENST00000543886 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
PTPRO-209ENST00000543886 PPP4R2Q9NY27 417 aa22.72■■□□□ 1.23
PTPRO-209ENST00000543886 POGKQ9P215 609 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms