RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 SETD5Q9C0A6 1442 aa23.6■■□□□ 1.37
TRIM46-209ENST00000543729 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
TRIM46-209ENST00000543729 UNC13BO14795 1591 aa23.58■■□□□ 1.37
TRIM46-209ENST00000543729 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
TRIM46-209ENST00000543729 XIRP1Q702N8 1843 aaKnown RBP23.54■■□□□ 1.36
TRIM46-209ENST00000543729 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
TRIM46-209ENST00000543729 KCNA6P17658 529 aa23.52■■□□□ 1.36
TRIM46-209ENST00000543729 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.35
TRIM46-209ENST00000543729 SLC26A8Q96RN1 970 aa23.51■■□□□ 1.35
TRIM46-209ENST00000543729 HDGFP51858 240 aaKnown RBP23.5■■□□□ 1.35
TRIM46-209ENST00000543729 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
TRIM46-209ENST00000543729 IQGAP3Q86VI3 1631 aa23.49■■□□□ 1.35
TRIM46-209ENST00000543729 MYO5BQ9ULV0 1848 aa23.48■■□□□ 1.35
TRIM46-209ENST00000543729 ZFYVE9O95405 1425 aa23.48■■□□□ 1.35
TRIM46-209ENST00000543729 BCANQ96GW7 911 aa23.48■■□□□ 1.35
TRIM46-209ENST00000543729 TMEM131LA2VDJ0 1609 aa23.48■■□□□ 1.35
TRIM46-209ENST00000543729 E9PCH4 1651 aa23.48■■□□□ 1.35
TRIM46-209ENST00000543729 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
TRIM46-209ENST00000543729 RIMS2Q9UQ26 1411 aa23.46■■□□□ 1.35
TRIM46-209ENST00000543729 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
TRIM46-209ENST00000543729 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
TRIM46-209ENST00000543729 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.35
TRIM46-209ENST00000543729 NUP155O75694 1391 aa23.45■■□□□ 1.35
TRIM46-209ENST00000543729 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
TRIM46-209ENST00000543729 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
TRIM46-209ENST00000543729 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
TRIM46-209ENST00000543729 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
TRIM46-209ENST00000543729 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
TRIM46-209ENST00000543729 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
TRIM46-209ENST00000543729 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.34
TRIM46-209ENST00000543729 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
TRIM46-209ENST00000543729 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
TRIM46-209ENST00000543729 MSH6P52701 1360 aa23.36■■□□□ 1.33
TRIM46-209ENST00000543729 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
TRIM46-209ENST00000543729 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
TRIM46-209ENST00000543729 DIP2AQ14689 1571 aa23.34■■□□□ 1.33
TRIM46-209ENST00000543729 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.32
TRIM46-209ENST00000543729 ADAMTS13Q76LX8 1427 aa23.31■■□□□ 1.32
TRIM46-209ENST00000543729 PIK3R4Q99570 1358 aa23.31■■□□□ 1.32
TRIM46-209ENST00000543729 SPHKAPQ2M3C7 1700 aa23.31■■□□□ 1.32
TRIM46-209ENST00000543729 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
TRIM46-209ENST00000543729 NCOA3Q9Y6Q9 1424 aa23.3■■□□□ 1.32
TRIM46-209ENST00000543729 MPHOSPH9Q99550 1183 aa23.3■■□□□ 1.32
TRIM46-209ENST00000543729 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
TRIM46-209ENST00000543729 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
TRIM46-209ENST00000543729 TRPM2O94759 1503 aa23.26■■□□□ 1.31
TRIM46-209ENST00000543729 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
TRIM46-209ENST00000543729 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
TRIM46-209ENST00000543729 SETBP1Q9Y6X0 1596 aa23.2■■□□□ 1.3
TRIM46-209ENST00000543729 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
TRIM46-209ENST00000543729 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
TRIM46-209ENST00000543729 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
TRIM46-209ENST00000543729 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
TRIM46-209ENST00000543729 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.17■■□□□ 1.3
TRIM46-209ENST00000543729 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
TRIM46-209ENST00000543729 NRXN3Q9Y4C0 1643 aa23.17■■□□□ 1.3
TRIM46-209ENST00000543729 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
TRIM46-209ENST00000543729 ATF3P18847 181 aa23.17■■□□□ 1.3
TRIM46-209ENST00000543729 FOXD1Q16676 465 aa23.16■■□□□ 1.3
TRIM46-209ENST00000543729 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
TRIM46-209ENST00000543729 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
TRIM46-209ENST00000543729 KIF1BO60333 1816 aa23.15■■□□□ 1.3
TRIM46-209ENST00000543729 JCADQ9P266 1359 aa23.15■■□□□ 1.3
TRIM46-209ENST00000543729 XRN1Q8IZH2 1706 aaKnown RBP23.14■■□□□ 1.3
TRIM46-209ENST00000543729 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
TRIM46-209ENST00000543729 COL16A1Q07092 1604 aaPredicted RBP23.12■■□□□ 1.29
TRIM46-209ENST00000543729 DCCP43146 1447 aa23.11■■□□□ 1.29
TRIM46-209ENST00000543729 METP08581 1390 aa23.09■■□□□ 1.29
TRIM46-209ENST00000543729 AHDC1Q5TGY3 1603 aaPredicted RBP23.09■■□□□ 1.29
TRIM46-209ENST00000543729 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
TRIM46-209ENST00000543729 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
TRIM46-209ENST00000543729 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
TRIM46-209ENST00000543729 POTEAQ6S8J7 498 aa23.04■■□□□ 1.28
TRIM46-209ENST00000543729 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
TRIM46-209ENST00000543729 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
TRIM46-209ENST00000543729 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
TRIM46-209ENST00000543729 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
TRIM46-209ENST00000543729 MST1RQ04912 1400 aa23.01■■□□□ 1.27
TRIM46-209ENST00000543729 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
TRIM46-209ENST00000543729 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
TRIM46-209ENST00000543729 SETD1AO15047 1707 aaKnown RBP22.97■■□□□ 1.27
TRIM46-209ENST00000543729 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
TRIM46-209ENST00000543729 PTCH1Q13635 1447 aa22.97■■□□□ 1.27
TRIM46-209ENST00000543729 NALCNQ8IZF0 1738 aa22.97■■□□□ 1.27
TRIM46-209ENST00000543729 LRP6O75581 1613 aa22.97■■□□□ 1.27
TRIM46-209ENST00000543729 PPLO60437 1756 aa22.96■■□□□ 1.27
TRIM46-209ENST00000543729 MEX3CQ5U5Q3 659 aaKnown RBP22.96■■□□□ 1.27
TRIM46-209ENST00000543729 NHSL1Q5SYE7 1610 aa22.95■■□□□ 1.26
TRIM46-209ENST00000543729 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
TRIM46-209ENST00000543729 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
TRIM46-209ENST00000543729 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
TRIM46-209ENST00000543729 ZNF772Q68DY9 489 aaPredicted RBP22.91■■□□□ 1.26
TRIM46-209ENST00000543729 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
TRIM46-209ENST00000543729 ROBO2Q9HCK4 1378 aa22.91■■□□□ 1.26
TRIM46-209ENST00000543729 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
TRIM46-209ENST00000543729 C1orf167Q5SNV9 1468 aa22.88■■□□□ 1.25
TRIM46-209ENST00000543729 RGL3Q3MIN7 710 aa22.88■■□□□ 1.25
TRIM46-209ENST00000543729 NUTM2BA6NNL0 878 aaPredicted RBP22.86■■□□□ 1.25
TRIM46-209ENST00000543729 NUTM2EB1AL46 878 aaPredicted RBP22.86■■□□□ 1.25
TRIM46-209ENST00000543729 NUTM2AQ8IVF1 878 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms