RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MYO5BQ9ULV0 1848 aa16.33■□□□□ 0.2
DDB1-222ENST00000543627 MED14O60244 1454 aa16.32■□□□□ 0.2
DDB1-222ENST00000543627 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
DDB1-222ENST00000543627 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
DDB1-222ENST00000543627 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
DDB1-222ENST00000543627 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
DDB1-222ENST00000543627 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
DDB1-222ENST00000543627 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
DDB1-222ENST00000543627 UBAP1LF5GYI3 381 aa16.29■□□□□ 0.2
DDB1-222ENST00000543627 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.2
DDB1-222ENST00000543627 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
DDB1-222ENST00000543627 CLTCL1P53675 1640 aa16.27■□□□□ 0.19
DDB1-222ENST00000543627 TRPM2O94759 1503 aa16.25■□□□□ 0.19
DDB1-222ENST00000543627 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
DDB1-222ENST00000543627 CCDC144AA2RUR9 1427 aa16.25■□□□□ 0.19
DDB1-222ENST00000543627 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
DDB1-222ENST00000543627 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
DDB1-222ENST00000543627 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
DDB1-222ENST00000543627 KCNA6P17658 529 aa16.23■□□□□ 0.19
DDB1-222ENST00000543627 KIF1BO60333 1816 aa16.23■□□□□ 0.19
DDB1-222ENST00000543627 CPS1P31327 1500 aa16.22■□□□□ 0.19
DDB1-222ENST00000543627 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
DDB1-222ENST00000543627 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
DDB1-222ENST00000543627 TOM1O60784 492 aa16.2■□□□□ 0.18
DDB1-222ENST00000543627 HRCP23327 699 aa16.2■□□□□ 0.18
DDB1-222ENST00000543627 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
DDB1-222ENST00000543627 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
DDB1-222ENST00000543627 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
DDB1-222ENST00000543627 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
DDB1-222ENST00000543627 LRRC7Q96NW7 1537 aa16.17■□□□□ 0.18
DDB1-222ENST00000543627 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
DDB1-222ENST00000543627 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
DDB1-222ENST00000543627 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
DDB1-222ENST00000543627 IQSEC2Q5JU85 1478 aa16.15■□□□□ 0.18
DDB1-222ENST00000543627 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
DDB1-222ENST00000543627 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
DDB1-222ENST00000543627 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
DDB1-222ENST00000543627 STK26Q9P289 416 aa16.11■□□□□ 0.17
DDB1-222ENST00000543627 METP08581 1390 aa16.11■□□□□ 0.17
DDB1-222ENST00000543627 ANKRD30BQ9BXX2 1392 aa16.11■□□□□ 0.17
DDB1-222ENST00000543627 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
DDB1-222ENST00000543627 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
DDB1-222ENST00000543627 SPATA31E1Q6ZUB1 1445 aa16.09■□□□□ 0.17
DDB1-222ENST00000543627 SOCS7O14512 581 aa16.08■□□□□ 0.16
DDB1-222ENST00000543627 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
DDB1-222ENST00000543627 MSH6P52701 1360 aa16.08■□□□□ 0.16
DDB1-222ENST00000543627 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
DDB1-222ENST00000543627 CHD2O14647 1828 aaKnown RBP16.08■□□□□ 0.16
DDB1-222ENST00000543627 TMEM132EQ6IEE7 984 aa16.07■□□□□ 0.16
DDB1-222ENST00000543627 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
DDB1-222ENST00000543627 DIP2AQ14689 1571 aa16.07■□□□□ 0.16
DDB1-222ENST00000543627 SETBP1Q9Y6X0 1596 aa16.06■□□□□ 0.16
DDB1-222ENST00000543627 ATF3P18847 181 aa16.06■□□□□ 0.16
DDB1-222ENST00000543627 PPLO60437 1756 aa16.05■□□□□ 0.16
DDB1-222ENST00000543627 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
DDB1-222ENST00000543627 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
DDB1-222ENST00000543627 HSPA1LP34931 641 aa16.05■□□□□ 0.16
DDB1-222ENST00000543627 CFAP70Q5T0N1 1121 aa16.04■□□□□ 0.16
DDB1-222ENST00000543627 SIN3AQ96ST3 1273 aa16.04■□□□□ 0.16
DDB1-222ENST00000543627 ALKQ9UM73 1620 aa16.04■□□□□ 0.16
DDB1-222ENST00000543627 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
DDB1-222ENST00000543627 XIRP1Q702N8 1843 aaKnown RBP16.03■□□□□ 0.16
DDB1-222ENST00000543627 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
DDB1-222ENST00000543627 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
DDB1-222ENST00000543627 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
DDB1-222ENST00000543627 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
DDB1-222ENST00000543627 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
DDB1-222ENST00000543627 WAPLQ7Z5K2 1190 aa15.99■□□□□ 0.15
DDB1-222ENST00000543627 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
DDB1-222ENST00000543627 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
DDB1-222ENST00000543627 ROBO2Q9HCK4 1378 aa15.97■□□□□ 0.15
DDB1-222ENST00000543627 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
DDB1-222ENST00000543627 PIK3C2GO75747 1445 aa15.96■□□□□ 0.15
DDB1-222ENST00000543627 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
DDB1-222ENST00000543627 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
DDB1-222ENST00000543627 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
DDB1-222ENST00000543627 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
DDB1-222ENST00000543627 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
DDB1-222ENST00000543627 POGKQ9P215 609 aa15.94■□□□□ 0.14
DDB1-222ENST00000543627 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
DDB1-222ENST00000543627 MYOM2P54296 1465 aa15.93■□□□□ 0.14
DDB1-222ENST00000543627 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
DDB1-222ENST00000543627 SETD1AO15047 1707 aaKnown RBP15.93■□□□□ 0.14
DDB1-222ENST00000543627 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
DDB1-222ENST00000543627 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
DDB1-222ENST00000543627 YTHDC2Q9H6S0 1430 aaKnown RBP15.92■□□□□ 0.14
DDB1-222ENST00000543627 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
DDB1-222ENST00000543627 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
DDB1-222ENST00000543627 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
DDB1-222ENST00000543627 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
DDB1-222ENST00000543627 ABCC11Q96J66 1382 aa15.89■□□□□ 0.13
DDB1-222ENST00000543627 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
DDB1-222ENST00000543627 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
DDB1-222ENST00000543627 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
DDB1-222ENST00000543627 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
DDB1-222ENST00000543627 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
DDB1-222ENST00000543627 ASXL1Q8IXJ9 1541 aa15.88■□□□□ 0.13
DDB1-222ENST00000543627 ESCO1Q5FWF5 840 aa15.87■□□□□ 0.13
DDB1-222ENST00000543627 ORAI2Q96SN7 254 aa15.87■□□□□ 0.13
DDB1-222ENST00000543627 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms