RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 ZFYVE9O95405 1425 aa24.94■■□□□ 1.58
SPPL3-207ENST00000543608 NUP155O75694 1391 aa24.92■■□□□ 1.58
SPPL3-207ENST00000543608 RIMS2Q9UQ26 1411 aa24.9■■□□□ 1.58
SPPL3-207ENST00000543608 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
SPPL3-207ENST00000543608 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
SPPL3-207ENST00000543608 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
SPPL3-207ENST00000543608 BCANQ96GW7 911 aa24.88■■□□□ 1.57
SPPL3-207ENST00000543608 CHGAP10645 457 aaKnown RBP24.87■■□□□ 1.57
SPPL3-207ENST00000543608 TMEM94Q12767 1356 aa24.86■■□□□ 1.57
SPPL3-207ENST00000543608 PLEKHG1Q9ULL1 1385 aa24.85■■□□□ 1.57
SPPL3-207ENST00000543608 PPP1R15AO75807 674 aaPredicted RBP24.85■■□□□ 1.57
SPPL3-207ENST00000543608 KCNA6P17658 529 aa24.85■■□□□ 1.57
SPPL3-207ENST00000543608 RBM33Q96EV2 1170 aaKnown RBP24.85■■□□□ 1.57
SPPL3-207ENST00000543608 SPHKAPQ2M3C7 1700 aa24.84■■□□□ 1.57
SPPL3-207ENST00000543608 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
SPPL3-207ENST00000543608 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
SPPL3-207ENST00000543608 CHD2O14647 1828 aaKnown RBP24.81■■□□□ 1.56
SPPL3-207ENST00000543608 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
SPPL3-207ENST00000543608 NAIPQ13075 1403 aa24.78■■□□□ 1.56
SPPL3-207ENST00000543608 ADAMTS13Q76LX8 1427 aa24.76■■□□□ 1.55
SPPL3-207ENST00000543608 SOCS7O14512 581 aa24.75■■□□□ 1.55
SPPL3-207ENST00000543608 HDGFP51858 240 aaKnown RBP24.75■■□□□ 1.55
SPPL3-207ENST00000543608 ROBO1Q9Y6N7 1651 aa24.75■■□□□ 1.55
SPPL3-207ENST00000543608 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
SPPL3-207ENST00000543608 CLTCL1P53675 1640 aa24.73■■□□□ 1.55
SPPL3-207ENST00000543608 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
SPPL3-207ENST00000543608 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
SPPL3-207ENST00000543608 MSH6P52701 1360 aa24.69■■□□□ 1.54
SPPL3-207ENST00000543608 NRXN3Q9Y4C0 1643 aa24.69■■□□□ 1.54
SPPL3-207ENST00000543608 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
SPPL3-207ENST00000543608 TRPM2O94759 1503 aa24.69■■□□□ 1.54
SPPL3-207ENST00000543608 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
SPPL3-207ENST00000543608 ZNF326Q5BKZ1 582 aaKnown RBP24.64■■□□□ 1.54
SPPL3-207ENST00000543608 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
SPPL3-207ENST00000543608 SETBP1Q9Y6X0 1596 aa24.63■■□□□ 1.53
SPPL3-207ENST00000543608 KIF1BO60333 1816 aa24.63■■□□□ 1.53
SPPL3-207ENST00000543608 PTPRUQ92729 1446 aa24.63■■□□□ 1.53
SPPL3-207ENST00000543608 NEXMIFQ5QGS0 1516 aa24.63■■□□□ 1.53
SPPL3-207ENST00000543608 PIK3R4Q99570 1358 aa24.62■■□□□ 1.53
SPPL3-207ENST00000543608 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
SPPL3-207ENST00000543608 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
SPPL3-207ENST00000543608 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
SPPL3-207ENST00000543608 PHLPP1O60346 1717 aa24.59■■□□□ 1.53
SPPL3-207ENST00000543608 C14orf37Q86TY3 774 aa24.59■■□□□ 1.53
SPPL3-207ENST00000543608 SLAIN2Q9P270 581 aa24.58■■□□□ 1.53
SPPL3-207ENST00000543608 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
SPPL3-207ENST00000543608 NCOA3Q9Y6Q9 1424 aa24.56■■□□□ 1.52
SPPL3-207ENST00000543608 METP08581 1390 aa24.54■■□□□ 1.52
SPPL3-207ENST00000543608 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
SPPL3-207ENST00000543608 COL16A1Q07092 1604 aaPredicted RBP24.52■■□□□ 1.52
SPPL3-207ENST00000543608 FOXD1Q16676 465 aa24.49■■□□□ 1.51
SPPL3-207ENST00000543608 C19orf44Q9H6X5 657 aa24.49■■□□□ 1.51
SPPL3-207ENST00000543608 SETD1AO15047 1707 aaKnown RBP24.49■■□□□ 1.51
SPPL3-207ENST00000543608 RGS17Q9UGC6 210 aaPredicted RBP24.48■■□□□ 1.51
SPPL3-207ENST00000543608 PPLO60437 1756 aa24.47■■□□□ 1.51
SPPL3-207ENST00000543608 ATF3P18847 181 aa24.47■■□□□ 1.51
SPPL3-207ENST00000543608 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
SPPL3-207ENST00000543608 NALCNQ8IZF0 1738 aa24.46■■□□□ 1.51
SPPL3-207ENST00000543608 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
SPPL3-207ENST00000543608 DCCP43146 1447 aa24.44■■□□□ 1.5
SPPL3-207ENST00000543608 JCADQ9P266 1359 aa24.42■■□□□ 1.5
SPPL3-207ENST00000543608 MST1RQ04912 1400 aa24.4■■□□□ 1.5
SPPL3-207ENST00000543608 ADGRL3Q9HAR2 1447 aa24.4■■□□□ 1.5
SPPL3-207ENST00000543608 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
SPPL3-207ENST00000543608 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
SPPL3-207ENST00000543608 LRP6O75581 1613 aa24.37■■□□□ 1.49
SPPL3-207ENST00000543608 VGFO15240 615 aaPredicted RBP24.37■■□□□ 1.49
SPPL3-207ENST00000543608 SHPRHQ149N8 1683 aa24.37■■□□□ 1.49
SPPL3-207ENST00000543608 CCDC144AA2RUR9 1427 aa24.36■■□□□ 1.49
SPPL3-207ENST00000543608 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
SPPL3-207ENST00000543608 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
SPPL3-207ENST00000543608 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
SPPL3-207ENST00000543608 MPHOSPH9Q99550 1183 aa24.35■■□□□ 1.49
SPPL3-207ENST00000543608 IFT172Q9UG01 1749 aa24.35■■□□□ 1.49
SPPL3-207ENST00000543608 ROBO2Q9HCK4 1378 aa24.34■■□□□ 1.49
SPPL3-207ENST00000543608 POTEAQ6S8J7 498 aa24.34■■□□□ 1.49
SPPL3-207ENST00000543608 SPATA31E1Q6ZUB1 1445 aa24.33■■□□□ 1.49
SPPL3-207ENST00000543608 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
SPPL3-207ENST00000543608 PRAG1Q86YV5 1406 aa24.29■■□□□ 1.48
SPPL3-207ENST00000543608 ADGRF5Q8IZF2 1346 aa24.29■■□□□ 1.48
SPPL3-207ENST00000543608 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
SPPL3-207ENST00000543608 DDX17Q92841 729 aaKnown RBP24.28■■□□□ 1.48
SPPL3-207ENST00000543608 SPATA31A6Q5VVP1 1343 aa24.28■■□□□ 1.48
SPPL3-207ENST00000543608 C1orf167Q5SNV9 1468 aa24.26■■□□□ 1.47
SPPL3-207ENST00000543608 MEX3CQ5U5Q3 659 aaKnown RBP24.24■■□□□ 1.47
SPPL3-207ENST00000543608 RAB3GAP2Q9H2M9 1393 aa24.23■■□□□ 1.47
SPPL3-207ENST00000543608 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
SPPL3-207ENST00000543608 NUTM2BA6NNL0 878 aaPredicted RBP24.21■■□□□ 1.47
SPPL3-207ENST00000543608 NUTM2EB1AL46 878 aaPredicted RBP24.21■■□□□ 1.47
SPPL3-207ENST00000543608 NUTM2AQ8IVF1 878 aaPredicted RBP24.21■■□□□ 1.47
SPPL3-207ENST00000543608 PIK3C2GO75747 1445 aa24.2■■□□□ 1.46
SPPL3-207ENST00000543608 KNDC1Q76NI1 1749 aa24.19■■□□□ 1.46
SPPL3-207ENST00000543608 LAMC1P11047 1609 aa24.19■■□□□ 1.46
SPPL3-207ENST00000543608 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
SPPL3-207ENST00000543608 ORAI2Q96SN7 254 aa24.18■■□□□ 1.46
SPPL3-207ENST00000543608 STK26Q9P289 416 aa24.18■■□□□ 1.46
SPPL3-207ENST00000543608 TECPR2O15040 1411 aa24.17■■□□□ 1.46
SPPL3-207ENST00000543608 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
SPPL3-207ENST00000543608 TMEM132EQ6IEE7 984 aa24.16■■□□□ 1.46
SPPL3-207ENST00000543608 LRPPRCP42704 1394 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms