RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
MSH2-206ENST00000543555 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
MSH2-206ENST00000543555 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
MSH2-206ENST00000543555 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.6
MSH2-206ENST00000543555 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
MSH2-206ENST00000543555 FRMPD1Q5SYB0 1578 aa18.82■□□□□ 0.6
MSH2-206ENST00000543555 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
MSH2-206ENST00000543555 RICTORQ6R327 1708 aa18.81■□□□□ 0.6
MSH2-206ENST00000543555 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
MSH2-206ENST00000543555 PANK3Q9H999 370 aa18.8■□□□□ 0.6
MSH2-206ENST00000543555 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
MSH2-206ENST00000543555 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
MSH2-206ENST00000543555 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
MSH2-206ENST00000543555 MYOM2P54296 1465 aa18.79■□□□□ 0.6
MSH2-206ENST00000543555 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
MSH2-206ENST00000543555 KIF1BO60333 1816 aa18.77■□□□□ 0.6
MSH2-206ENST00000543555 EIF3AQ14152 1382 aaKnown RBP18.75■□□□□ 0.59
MSH2-206ENST00000543555 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
MSH2-206ENST00000543555 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
MSH2-206ENST00000543555 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
MSH2-206ENST00000543555 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
MSH2-206ENST00000543555 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
MSH2-206ENST00000543555 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
MSH2-206ENST00000543555 PPP4R2Q9NY27 417 aa18.74■□□□□ 0.59
MSH2-206ENST00000543555 NPATQ14207 1427 aa18.72■□□□□ 0.59
MSH2-206ENST00000543555 ADGRB3O60242 1522 aa18.72■□□□□ 0.59
MSH2-206ENST00000543555 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
MSH2-206ENST00000543555 SYNMO15061 1565 aa18.72■□□□□ 0.59
MSH2-206ENST00000543555 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
MSH2-206ENST00000543555 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
MSH2-206ENST00000543555 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
MSH2-206ENST00000543555 SENP3-EIF4A1A0A087X0R7 540 aa18.71■□□□□ 0.59
MSH2-206ENST00000543555 ABCC3O15438 1527 aa18.69■□□□□ 0.58
MSH2-206ENST00000543555 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
MSH2-206ENST00000543555 INSRP06213 1382 aa18.67■□□□□ 0.58
MSH2-206ENST00000543555 ZMYM4Q5VZL5 1548 aa18.67■□□□□ 0.58
MSH2-206ENST00000543555 FBXO31Q5XUX0 539 aaPredicted RBP18.67■□□□□ 0.58
MSH2-206ENST00000543555 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
MSH2-206ENST00000543555 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
MSH2-206ENST00000543555 MYOM1P52179 1685 aa18.67■□□□□ 0.58
MSH2-206ENST00000543555 NOS1P29475 1434 aa18.66■□□□□ 0.58
MSH2-206ENST00000543555 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
MSH2-206ENST00000543555 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
MSH2-206ENST00000543555 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
MSH2-206ENST00000543555 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
MSH2-206ENST00000543555 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
MSH2-206ENST00000543555 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
MSH2-206ENST00000543555 CEBPAP49715 358 aaPredicted RBP18.63■□□□□ 0.57
MSH2-206ENST00000543555 SETBP1Q9Y6X0 1596 aa18.63■□□□□ 0.57
MSH2-206ENST00000543555 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
MSH2-206ENST00000543555 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
MSH2-206ENST00000543555 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
MSH2-206ENST00000543555 PPLO60437 1756 aa18.62■□□□□ 0.57
MSH2-206ENST00000543555 PIK3C2GO75747 1445 aa18.61■□□□□ 0.57
MSH2-206ENST00000543555 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
MSH2-206ENST00000543555 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
MSH2-206ENST00000543555 B4GALNT3Q6L9W6 998 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 RBM19Q9Y4C8 960 aaKnown RBP18.6■□□□□ 0.57
MSH2-206ENST00000543555 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
MSH2-206ENST00000543555 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
MSH2-206ENST00000543555 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
MSH2-206ENST00000543555 C14orf93Q9H972 538 aaKnown RBP18.58■□□□□ 0.56
MSH2-206ENST00000543555 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
MSH2-206ENST00000543555 ZC3H13Q5T200 1668 aaKnown RBP18.56■□□□□ 0.56
MSH2-206ENST00000543555 ADGRB1O14514 1584 aa18.56■□□□□ 0.56
MSH2-206ENST00000543555 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
MSH2-206ENST00000543555 ARHGEF40Q8TER5 1519 aa18.55■□□□□ 0.56
MSH2-206ENST00000543555 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
MSH2-206ENST00000543555 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
MSH2-206ENST00000543555 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
MSH2-206ENST00000543555 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
MSH2-206ENST00000543555 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
MSH2-206ENST00000543555 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
MSH2-206ENST00000543555 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
MSH2-206ENST00000543555 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
MSH2-206ENST00000543555 IDI1Q13907 227 aa18.5■□□□□ 0.55
MSH2-206ENST00000543555 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
MSH2-206ENST00000543555 TMEM132EQ6IEE7 984 aa18.49■□□□□ 0.55
MSH2-206ENST00000543555 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
MSH2-206ENST00000543555 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
MSH2-206ENST00000543555 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
MSH2-206ENST00000543555 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
MSH2-206ENST00000543555 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
MSH2-206ENST00000543555 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
MSH2-206ENST00000543555 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
MSH2-206ENST00000543555 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
MSH2-206ENST00000543555 ARHGEF28Q8N1W1 1705 aaKnown RBP18.42■□□□□ 0.54
MSH2-206ENST00000543555 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
MSH2-206ENST00000543555 AGLP35573 1532 aa18.42■□□□□ 0.54
MSH2-206ENST00000543555 NSD3Q9BZ95 1437 aa18.41■□□□□ 0.54
MSH2-206ENST00000543555 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
MSH2-206ENST00000543555 SLC12A5Q9H2X9 1139 aa18.4■□□□□ 0.54
MSH2-206ENST00000543555 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
MSH2-206ENST00000543555 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.54
MSH2-206ENST00000543555 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
MSH2-206ENST00000543555 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms