RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 ADGRF5Q8IZF2 1346 aa27.97■■■□□ 2.07
ME3-212ENST00000543262 TMC1Q8TDI8 760 aa27.97■■■□□ 2.07
ME3-212ENST00000543262 MYBBP1AQ9BQG0 1328 aaKnown RBP27.96■■■□□ 2.07
ME3-212ENST00000543262 CAMSAP1Q5T5Y3 1602 aa27.95■■■□□ 2.06
ME3-212ENST00000543262 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
ME3-212ENST00000543262 PNISRQ8TF01 805 aaKnown RBP27.95■■■□□ 2.06
ME3-212ENST00000543262 ADGRB3O60242 1522 aa27.94■■■□□ 2.06
ME3-212ENST00000543262 CFAP70Q5T0N1 1121 aa27.94■■■□□ 2.06
ME3-212ENST00000543262 PANK3Q9H999 370 aa27.93■■■□□ 2.06
ME3-212ENST00000543262 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
ME3-212ENST00000543262 CHGAP10645 457 aaKnown RBP27.92■■■□□ 2.06
ME3-212ENST00000543262 BCANQ96GW7 911 aa27.92■■■□□ 2.06
ME3-212ENST00000543262 BRD4O60885 1362 aaPredicted RBP27.92■■■□□ 2.06
ME3-212ENST00000543262 DIP2BQ9P265 1576 aa27.91■■■□□ 2.06
ME3-212ENST00000543262 PARD3Q8TEW0 1356 aa27.91■■■□□ 2.06
ME3-212ENST00000543262 NRXN1Q9ULB1 1477 aa27.9■■■□□ 2.06
ME3-212ENST00000543262 SIGLEC1Q9BZZ2 1709 aa27.89■■■□□ 2.05
ME3-212ENST00000543262 EIF3AQ14152 1382 aaKnown RBP27.89■■■□□ 2.05
ME3-212ENST00000543262 NOS1P29475 1434 aa27.88■■■□□ 2.05
ME3-212ENST00000543262 TSPOAP1O95153 1857 aa27.86■■■□□ 2.05
ME3-212ENST00000543262 PPLO60437 1756 aa27.86■■■□□ 2.05
ME3-212ENST00000543262 CDCA8Q53HL2 280 aa27.85■■■□□ 2.05
ME3-212ENST00000543262 CC2D1BQ5T0F9 858 aaKnown RBP27.84■■■□□ 2.05
ME3-212ENST00000543262 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
ME3-212ENST00000543262 ZC3H13Q5T200 1668 aaKnown RBP27.83■■■□□ 2.05
ME3-212ENST00000543262 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
ME3-212ENST00000543262 ZMYM4Q5VZL5 1548 aa27.82■■■□□ 2.04
ME3-212ENST00000543262 SYNMO15061 1565 aa27.81■■■□□ 2.04
ME3-212ENST00000543262 ARHGAP31Q2M1Z3 1444 aa27.81■■■□□ 2.04
ME3-212ENST00000543262 PIK3C2BO00750 1634 aa27.8■■■□□ 2.04
ME3-212ENST00000543262 RPGRIP1LQ68CZ1 1315 aa27.79■■■□□ 2.04
ME3-212ENST00000543262 PIK3C2GO75747 1445 aa27.77■■■□□ 2.04
ME3-212ENST00000543262 SETBP1Q9Y6X0 1596 aa27.77■■■□□ 2.04
ME3-212ENST00000543262 KDM5AP29375 1690 aaKnown RBP27.75■■■□□ 2.03
ME3-212ENST00000543262 MYOM1P52179 1685 aa27.75■■■□□ 2.03
ME3-212ENST00000543262 C14orf93Q9H972 538 aaKnown RBP27.74■■■□□ 2.03
ME3-212ENST00000543262 SLC24A1O60721 1099 aa27.74■■■□□ 2.03
ME3-212ENST00000543262 KNSTRNQ9Y448 316 aa27.73■■■□□ 2.03
ME3-212ENST00000543262 MYO3AQ8NEV4 1616 aa27.72■■■□□ 2.03
ME3-212ENST00000543262 ERVK-7P63135 1459 aa27.72■■■□□ 2.03
ME3-212ENST00000543262 SENP3-EIF4A1A0A087X0R7 540 aa27.72■■■□□ 2.03
ME3-212ENST00000543262 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
ME3-212ENST00000543262 IDI1Q13907 227 aa27.7■■■□□ 2.03
ME3-212ENST00000543262 SMG6Q86US8 1419 aaKnown RBP27.7■■■□□ 2.02
ME3-212ENST00000543262 PREX1Q8TCU6 1659 aa27.68■■■□□ 2.02
ME3-212ENST00000543262 ADGRB1O14514 1584 aa27.68■■■□□ 2.02
ME3-212ENST00000543262 NEXMIFQ5QGS0 1516 aa27.68■■■□□ 2.02
ME3-212ENST00000543262 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
ME3-212ENST00000543262 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
ME3-212ENST00000543262 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
ME3-212ENST00000543262 TRAK1Q9UPV9 953 aa27.67■■■□□ 2.02
ME3-212ENST00000543262 VGFO15240 615 aaPredicted RBP27.66■■■□□ 2.02
ME3-212ENST00000543262 TMEM132EQ6IEE7 984 aa27.66■■■□□ 2.02
ME3-212ENST00000543262 SBNO2Q9Y2G9 1366 aa27.66■■■□□ 2.02
ME3-212ENST00000543262 CENPJQ9HC77 1338 aaPredicted RBP27.66■■■□□ 2.02
ME3-212ENST00000543262 NUDCQ9Y266 331 aa27.64■■■□□ 2.02
ME3-212ENST00000543262 ASXL1Q8IXJ9 1541 aa27.64■■■□□ 2.01
ME3-212ENST00000543262 REREQ9P2R6 1566 aa27.63■■■□□ 2.01
ME3-212ENST00000543262 MYO5BQ9ULV0 1848 aa27.63■■■□□ 2.01
ME3-212ENST00000543262 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
ME3-212ENST00000543262 QRICH2Q9H0J4 1663 aa27.6■■■□□ 2.01
ME3-212ENST00000543262 AGLP35573 1532 aa27.6■■■□□ 2.01
ME3-212ENST00000543262 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
ME3-212ENST00000543262 TMEM131LA2VDJ0 1609 aa27.59■■■□□ 2.01
ME3-212ENST00000543262 PPP2R1AP30153 589 aa27.58■■■□□ 2.01
ME3-212ENST00000543262 ERICH6BQ5W0A0 696 aa27.58■■■□□ 2.01
ME3-212ENST00000543262 NPC1L1Q9UHC9 1359 aa27.58■■■□□ 2.01
ME3-212ENST00000543262 ZFYVE9O95405 1425 aa27.56■■■□□ 2
ME3-212ENST00000543262 INSRP06213 1382 aa27.54■■■□□ 2
ME3-212ENST00000543262 PPP6R1Q9UPN7 881 aa27.54■■■□□ 2
ME3-212ENST00000543262 CARD14Q9BXL6 1004 aa27.53■■■□□ 2
ME3-212ENST00000543262 CLTCQ00610 1675 aaKnown RBP27.53■■■□□ 2
ME3-212ENST00000543262 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
ME3-212ENST00000543262 SALL2Q9Y467 1007 aaPredicted RBP27.51■■□□□ 1.99
ME3-212ENST00000543262 ARHGEF28Q8N1W1 1705 aaKnown RBP27.51■■□□□ 1.99
ME3-212ENST00000543262 TSHZ2Q9NRE2 1034 aa27.5■■□□□ 1.99
ME3-212ENST00000543262 SENP3Q9H4L4 574 aaPredicted RBP27.47■■□□□ 1.99
ME3-212ENST00000543262 MLECQ14165 292 aa27.47■■□□□ 1.99
ME3-212ENST00000543262 PPP4R2Q9NY27 417 aa27.47■■□□□ 1.99
ME3-212ENST00000543262 ADAMTS8Q9UP79 889 aa27.47■■□□□ 1.99
ME3-212ENST00000543262 RNF123Q5XPI4 1314 aa27.46■■□□□ 1.99
ME3-212ENST00000543262 ARHGEF40Q8TER5 1519 aa27.46■■□□□ 1.99
ME3-212ENST00000543262 PDE3BQ13370 1112 aa27.44■■□□□ 1.98
ME3-212ENST00000543262 SLC12A5Q9H2X9 1139 aa27.44■■□□□ 1.98
ME3-212ENST00000543262 STAG3Q9UJ98 1225 aa27.42■■□□□ 1.98
ME3-212ENST00000543262 WDR43Q15061 677 aaKnown RBP eCLIP27.41■■□□□ 1.98
ME3-212ENST00000543262 EVC2Q86UK5 1308 aa27.41■■□□□ 1.98
ME3-212ENST00000543262 STK26Q9P289 416 aa27.41■■□□□ 1.98
ME3-212ENST00000543262 SPATA31D1Q6ZQQ2 1576 aa27.4■■□□□ 1.98
ME3-212ENST00000543262 TULP4Q9NRJ4 1543 aa27.4■■□□□ 1.98
ME3-212ENST00000543262 PUS7Q96PZ0 661 aaKnown RBP27.38■■□□□ 1.97
ME3-212ENST00000543262 NSD3Q9BZ95 1437 aa27.38■■□□□ 1.97
ME3-212ENST00000543262 SAFB2Q14151 953 aaKnown RBP eCLIP27.37■■□□□ 1.97
ME3-212ENST00000543262 CDCA7LQ96GN5 454 aa27.36■■□□□ 1.97
ME3-212ENST00000543262 ALKQ9UM73 1620 aa27.34■■□□□ 1.97
ME3-212ENST00000543262 A2ML1A8K2U0 1454 aa27.34■■□□□ 1.97
ME3-212ENST00000543262 YTHDC2Q9H6S0 1430 aaKnown RBP27.33■■□□□ 1.97
ME3-212ENST00000543262 PTPRMP28827 1452 aa27.33■■□□□ 1.97
ME3-212ENST00000543262 CABP2Q9NPB3 220 aa27.33■■□□□ 1.97
ME3-212ENST00000543262 B4GALNT3Q6L9W6 998 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms