RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 EIF3AQ14152 1382 aaKnown RBP24.96■■□□□ 1.59
COPS7A-215ENST00000543155 PPRC1Q5VV67 1664 aaKnown RBP24.96■■□□□ 1.59
COPS7A-215ENST00000543155 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
COPS7A-215ENST00000543155 PDE3BQ13370 1112 aa24.95■■□□□ 1.58
COPS7A-215ENST00000543155 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
COPS7A-215ENST00000543155 MYOM1P52179 1685 aa24.94■■□□□ 1.58
COPS7A-215ENST00000543155 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
COPS7A-215ENST00000543155 FANCIQ9NVI1 1328 aa24.92■■□□□ 1.58
COPS7A-215ENST00000543155 KDM5AP29375 1690 aaKnown RBP24.92■■□□□ 1.58
COPS7A-215ENST00000543155 UGGT1Q9NYU2 1555 aa24.92■■□□□ 1.58
COPS7A-215ENST00000543155 MROH2AA6NES4 1674 aa24.91■■□□□ 1.58
COPS7A-215ENST00000543155 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
COPS7A-215ENST00000543155 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
COPS7A-215ENST00000543155 CCDC136Q96JN2 1154 aa24.86■■□□□ 1.57
COPS7A-215ENST00000543155 NPM1P06748 294 aaKnown RBP eCLIP24.86■■□□□ 1.57
COPS7A-215ENST00000543155 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
COPS7A-215ENST00000543155 RRP1P56182 461 aaKnown RBP24.85■■□□□ 1.57
COPS7A-215ENST00000543155 HECW2Q9P2P5 1572 aa24.84■■□□□ 1.57
COPS7A-215ENST00000543155 NRXN1Q9ULB1 1477 aa24.84■■□□□ 1.57
COPS7A-215ENST00000543155 ADGRB3O60242 1522 aa24.84■■□□□ 1.57
COPS7A-215ENST00000543155 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
COPS7A-215ENST00000543155 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
COPS7A-215ENST00000543155 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.57
COPS7A-215ENST00000543155 FRMPD1Q5SYB0 1578 aa24.82■■□□□ 1.56
COPS7A-215ENST00000543155 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
COPS7A-215ENST00000543155 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
COPS7A-215ENST00000543155 SLC24A1O60721 1099 aa24.82■■□□□ 1.56
COPS7A-215ENST00000543155 AMER1Q5JTC6 1135 aaPredicted RBP24.82■■□□□ 1.56
COPS7A-215ENST00000543155 NPC1L1Q9UHC9 1359 aa24.81■■□□□ 1.56
COPS7A-215ENST00000543155 PPP2R1AP30153 589 aa24.8■■□□□ 1.56
COPS7A-215ENST00000543155 ERVK-7P63135 1459 aa24.79■■□□□ 1.56
COPS7A-215ENST00000543155 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
COPS7A-215ENST00000543155 ADGRF5Q8IZF2 1346 aa24.79■■□□□ 1.56
COPS7A-215ENST00000543155 SETBP1Q9Y6X0 1596 aa24.79■■□□□ 1.56
COPS7A-215ENST00000543155 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
COPS7A-215ENST00000543155 CFAP70Q5T0N1 1121 aa24.78■■□□□ 1.56
COPS7A-215ENST00000543155 PPLO60437 1756 aa24.77■■□□□ 1.56
COPS7A-215ENST00000543155 MSH5O43196 834 aa24.76■■□□□ 1.55
COPS7A-215ENST00000543155 CDCA7LQ96GN5 454 aa24.74■■□□□ 1.55
COPS7A-215ENST00000543155 NPATQ14207 1427 aa24.74■■□□□ 1.55
COPS7A-215ENST00000543155 NOS1P29475 1434 aa24.73■■□□□ 1.55
COPS7A-215ENST00000543155 ADAMTS8Q9UP79 889 aa24.73■■□□□ 1.55
COPS7A-215ENST00000543155 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
COPS7A-215ENST00000543155 WDR43Q15061 677 aaKnown RBP eCLIP24.72■■□□□ 1.55
COPS7A-215ENST00000543155 ABCC3O15438 1527 aa24.72■■□□□ 1.55
COPS7A-215ENST00000543155 ZC3H13Q5T200 1668 aaKnown RBP24.71■■□□□ 1.55
COPS7A-215ENST00000543155 CAMSAP1Q5T5Y3 1602 aa24.71■■□□□ 1.55
COPS7A-215ENST00000543155 NEO1Q92859 1461 aa24.7■■□□□ 1.55
COPS7A-215ENST00000543155 EXOC6Q8TAG9 804 aa24.68■■□□□ 1.54
COPS7A-215ENST00000543155 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
COPS7A-215ENST00000543155 QRICH2Q9H0J4 1663 aa24.66■■□□□ 1.54
COPS7A-215ENST00000543155 GGT6Q6P531 493 aa24.64■■□□□ 1.54
COPS7A-215ENST00000543155 CHGAP10645 457 aaKnown RBP24.64■■□□□ 1.53
COPS7A-215ENST00000543155 ADGRB1O14514 1584 aa24.64■■□□□ 1.53
COPS7A-215ENST00000543155 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.53
COPS7A-215ENST00000543155 SIGLEC1Q9BZZ2 1709 aa24.63■■□□□ 1.53
COPS7A-215ENST00000543155 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
COPS7A-215ENST00000543155 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
COPS7A-215ENST00000543155 CENPJQ9HC77 1338 aaPredicted RBP24.63■■□□□ 1.53
COPS7A-215ENST00000543155 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
COPS7A-215ENST00000543155 C14orf93Q9H972 538 aaKnown RBP24.6■■□□□ 1.53
COPS7A-215ENST00000543155 ZNF521Q96K83 1311 aa24.6■■□□□ 1.53
COPS7A-215ENST00000543155 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
COPS7A-215ENST00000543155 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
COPS7A-215ENST00000543155 CARD14Q9BXL6 1004 aa24.57■■□□□ 1.52
COPS7A-215ENST00000543155 GLI2P10070 1586 aa24.55■■□□□ 1.52
COPS7A-215ENST00000543155 GOLGA2Q08379 1002 aa24.55■■□□□ 1.52
COPS7A-215ENST00000543155 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
COPS7A-215ENST00000543155 NEXMIFQ5QGS0 1516 aa24.54■■□□□ 1.52
COPS7A-215ENST00000543155 DUSP27Q5VZP5 1158 aa24.54■■□□□ 1.52
COPS7A-215ENST00000543155 PLIN1O60240 522 aa24.53■■□□□ 1.52
COPS7A-215ENST00000543155 ARHGAP31Q2M1Z3 1444 aa24.53■■□□□ 1.52
COPS7A-215ENST00000543155 TRAK1Q9UPV9 953 aa24.53■■□□□ 1.52
COPS7A-215ENST00000543155 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
COPS7A-215ENST00000543155 RAPGEF3O95398 923 aa24.52■■□□□ 1.52
COPS7A-215ENST00000543155 TCERG1O14776 1098 aaKnown RBP24.5■■□□□ 1.51
COPS7A-215ENST00000543155 CRBNQ96SW2 442 aa24.5■■□□□ 1.51
COPS7A-215ENST00000543155 NSD3Q9BZ95 1437 aa24.5■■□□□ 1.51
COPS7A-215ENST00000543155 POLR3AO14802 1390 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-215ENST00000543155 SLFN5Q08AF3 891 aa24.48■■□□□ 1.51
COPS7A-215ENST00000543155 CCDC146Q8IYE0 955 aa24.48■■□□□ 1.51
COPS7A-215ENST00000543155 SHPRHQ149N8 1683 aa24.47■■□□□ 1.51
COPS7A-215ENST00000543155 NGEFQ8N5V2 710 aa24.47■■□□□ 1.51
COPS7A-215ENST00000543155 TMEM132EQ6IEE7 984 aa24.46■■□□□ 1.51
COPS7A-215ENST00000543155 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
COPS7A-215ENST00000543155 TRMT2AQ8IZ69 625 aaKnown RBP24.45■■□□□ 1.5
COPS7A-215ENST00000543155 ANP32AP39687 249 aaKnown RBP24.44■■□□□ 1.5
COPS7A-215ENST00000543155 APAF1O14727 1248 aa24.44■■□□□ 1.5
COPS7A-215ENST00000543155 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
COPS7A-215ENST00000543155 PUS7Q96PZ0 661 aaKnown RBP24.43■■□□□ 1.5
COPS7A-215ENST00000543155 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
COPS7A-215ENST00000543155 NKTRP30414 1462 aaKnown RBP24.43■■□□□ 1.5
COPS7A-215ENST00000543155 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
COPS7A-215ENST00000543155 MS4A1P11836 297 aa24.43■■□□□ 1.5
COPS7A-215ENST00000543155 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.43■■□□□ 1.5
COPS7A-215ENST00000543155 YEATS2Q9ULM3 1422 aa24.42■■□□□ 1.5
COPS7A-215ENST00000543155 MORC1Q86VD1 984 aa24.41■■□□□ 1.5
COPS7A-215ENST00000543155 NOP58Q9Y2X3 529 aaKnown RBP24.41■■□□□ 1.5
COPS7A-215ENST00000543155 C20orf194Q5TEA3 1177 aa24.41■■□□□ 1.5
COPS7A-215ENST00000543155 SLC12A5Q9H2X9 1139 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms