RNA–Protein interactions for RNA: ENST00000543128.5

CCDC189-205, Transcript of coiled-coil domain containing 189, humanhuman

TSL 1 (best)

Gene CCDC189, Length 1,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-205ENST00000543128 ABCC3O15438 1527 aa29.62■■■□□ 2.33
CCDC189-205ENST00000543128 REREQ9P2R6 1566 aa29.61■■■□□ 2.33
CCDC189-205ENST00000543128 NEFLP07196 543 aa29.61■■■□□ 2.33
CCDC189-205ENST00000543128 ARHGEF40Q8TER5 1519 aa29.6■■■□□ 2.33
CCDC189-205ENST00000543128 GGT6Q6P531 493 aa29.6■■■□□ 2.33
CCDC189-205ENST00000543128 ADGRB3O60242 1522 aa29.6■■■□□ 2.33
CCDC189-205ENST00000543128 PER1O15534 1290 aaPredicted RBP29.59■■■□□ 2.33
CCDC189-205ENST00000543128 CNGB1Q14028 1251 aaPredicted RBP29.59■■■□□ 2.33
CCDC189-205ENST00000543128 MYBBP1AQ9BQG0 1328 aaKnown RBP29.59■■■□□ 2.33
CCDC189-205ENST00000543128 BRD4O60885 1362 aaPredicted RBP29.57■■■□□ 2.32
CCDC189-205ENST00000543128 WASHC2CQ9Y4E1 1318 aa29.57■■■□□ 2.32
CCDC189-205ENST00000543128 CAMSAP1Q5T5Y3 1602 aa29.57■■■□□ 2.32
CCDC189-205ENST00000543128 NRXN1Q9ULB1 1477 aa29.57■■■□□ 2.32
CCDC189-205ENST00000543128 PARD3Q8TEW0 1356 aa29.55■■■□□ 2.32
CCDC189-205ENST00000543128 PNISRQ8TF01 805 aaKnown RBP29.55■■■□□ 2.32
CCDC189-205ENST00000543128 TMC1Q8TDI8 760 aa29.54■■■□□ 2.32
CCDC189-205ENST00000543128 AGLP35573 1532 aa29.53■■■□□ 2.32
CCDC189-205ENST00000543128 EIF3AQ14152 1382 aaKnown RBP29.53■■■□□ 2.32
CCDC189-205ENST00000543128 CFAP65Q6ZU64 1925 aaKnown RBP29.53■■■□□ 2.32
CCDC189-205ENST00000543128 ADGRF5Q8IZF2 1346 aa29.52■■■□□ 2.32
CCDC189-205ENST00000543128 ZC3H13Q5T200 1668 aaKnown RBP29.5■■■□□ 2.31
CCDC189-205ENST00000543128 PANK3Q9H999 370 aa29.5■■■□□ 2.31
CCDC189-205ENST00000543128 NOS1P29475 1434 aa29.49■■■□□ 2.31
CCDC189-205ENST00000543128 PPLO60437 1756 aa29.49■■■□□ 2.31
CCDC189-205ENST00000543128 CDCA8Q53HL2 280 aa29.48■■■□□ 2.31
CCDC189-205ENST00000543128 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
CCDC189-205ENST00000543128 CFAP70Q5T0N1 1121 aa29.48■■■□□ 2.31
CCDC189-205ENST00000543128 LRPPRCP42704 1394 aaKnown RBP29.47■■■□□ 2.31
CCDC189-205ENST00000543128 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
CCDC189-205ENST00000543128 PIK3C2BO00750 1634 aa29.45■■■□□ 2.31
CCDC189-205ENST00000543128 NLRP13Q86W25 1043 aa29.45■■■□□ 2.3
CCDC189-205ENST00000543128 SYNMO15061 1565 aa29.44■■■□□ 2.3
CCDC189-205ENST00000543128 SETBP1Q9Y6X0 1596 aa29.44■■■□□ 2.3
CCDC189-205ENST00000543128 RPGRIP1LQ68CZ1 1315 aa29.43■■■□□ 2.3
CCDC189-205ENST00000543128 SLC24A1O60721 1099 aa29.43■■■□□ 2.3
CCDC189-205ENST00000543128 BCANQ96GW7 911 aa29.41■■■□□ 2.3
CCDC189-205ENST00000543128 CHGAP10645 457 aaKnown RBP29.41■■■□□ 2.3
CCDC189-205ENST00000543128 MYO3AQ8NEV4 1616 aa29.4■■■□□ 2.3
CCDC189-205ENST00000543128 PIK3C2GO75747 1445 aa29.39■■■□□ 2.29
CCDC189-205ENST00000543128 PPP6R1Q9UPN7 881 aa29.38■■■□□ 2.29
CCDC189-205ENST00000543128 KDM5AP29375 1690 aaKnown RBP29.38■■■□□ 2.29
CCDC189-205ENST00000543128 MYOM1P52179 1685 aa29.38■■■□□ 2.29
CCDC189-205ENST00000543128 CC2D1BQ5T0F9 858 aaKnown RBP29.34■■■□□ 2.29
CCDC189-205ENST00000543128 SMG6Q86US8 1419 aaKnown RBP29.34■■■□□ 2.29
CCDC189-205ENST00000543128 C14orf93Q9H972 538 aaKnown RBP29.34■■■□□ 2.29
CCDC189-205ENST00000543128 SBNO2Q9Y2G9 1366 aa29.33■■■□□ 2.29
CCDC189-205ENST00000543128 ERVK-7P63135 1459 aa29.32■■■□□ 2.28
CCDC189-205ENST00000543128 ADGRB1O14514 1584 aa29.3■■■□□ 2.28
CCDC189-205ENST00000543128 MLECQ14165 292 aa29.29■■■□□ 2.28
CCDC189-205ENST00000543128 KNSTRNQ9Y448 316 aa29.29■■■□□ 2.28
CCDC189-205ENST00000543128 NEXMIFQ5QGS0 1516 aa29.29■■■□□ 2.28
CCDC189-205ENST00000543128 ERICH6BQ5W0A0 696 aa29.29■■■□□ 2.28
CCDC189-205ENST00000543128 PREX1Q8TCU6 1659 aa29.29■■■□□ 2.28
CCDC189-205ENST00000543128 INSRP06213 1382 aa29.28■■■□□ 2.28
CCDC189-205ENST00000543128 SLC52A1Q9NWF4 448 aa29.27■■■□□ 2.28
CCDC189-205ENST00000543128 ASXL1Q8IXJ9 1541 aa29.26■■■□□ 2.27
CCDC189-205ENST00000543128 NPC1L1Q9UHC9 1359 aa29.26■■■□□ 2.27
CCDC189-205ENST00000543128 AMER1Q5JTC6 1135 aaPredicted RBP29.25■■■□□ 2.27
CCDC189-205ENST00000543128 NUDCQ9Y266 331 aa29.25■■■□□ 2.27
CCDC189-205ENST00000543128 IDI1Q13907 227 aa29.24■■■□□ 2.27
CCDC189-205ENST00000543128 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
CCDC189-205ENST00000543128 CENPJQ9HC77 1338 aaPredicted RBP29.23■■■□□ 2.27
CCDC189-205ENST00000543128 ZFYVE9O95405 1425 aa29.22■■■□□ 2.27
CCDC189-205ENST00000543128 CLTCQ00610 1675 aaKnown RBP29.2■■■□□ 2.27
CCDC189-205ENST00000543128 QRICH2Q9H0J4 1663 aa29.2■■■□□ 2.27
CCDC189-205ENST00000543128 TMEM131LA2VDJ0 1609 aa29.19■■■□□ 2.26
CCDC189-205ENST00000543128 IRX6P78412 446 aaPredicted RBP29.18■■■□□ 2.26
CCDC189-205ENST00000543128 ESF1Q9H501 851 aaKnown RBP29.17■■■□□ 2.26
CCDC189-205ENST00000543128 MYO5BQ9ULV0 1848 aa29.17■■■□□ 2.26
CCDC189-205ENST00000543128 TRAK1Q9UPV9 953 aa29.17■■■□□ 2.26
CCDC189-205ENST00000543128 BLMP54132 1417 aaPredicted RBP29.15■■■□□ 2.26
CCDC189-205ENST00000543128 PPP2R1AP30153 589 aa29.15■■■□□ 2.26
CCDC189-205ENST00000543128 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
CCDC189-205ENST00000543128 ARHGEF28Q8N1W1 1705 aaKnown RBP29.11■■■□□ 2.25
CCDC189-205ENST00000543128 RNF123Q5XPI4 1314 aa29.11■■■□□ 2.25
CCDC189-205ENST00000543128 ZMYM3Q14202 1370 aa29.11■■■□□ 2.25
CCDC189-205ENST00000543128 FBXO31Q5XUX0 539 aaPredicted RBP29.1■■■□□ 2.25
CCDC189-205ENST00000543128 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
CCDC189-205ENST00000543128 TSHZ2Q9NRE2 1034 aa29.09■■■□□ 2.25
CCDC189-205ENST00000543128 SENP3-EIF4A1A0A087X0R7 540 aa29.08■■■□□ 2.25
CCDC189-205ENST00000543128 PPP4R2Q9NY27 417 aa29.08■■■□□ 2.25
CCDC189-205ENST00000543128 PDE3BQ13370 1112 aa29.08■■■□□ 2.25
CCDC189-205ENST00000543128 CARD14Q9BXL6 1004 aa29.06■■■□□ 2.24
CCDC189-205ENST00000543128 PUS7Q96PZ0 661 aaKnown RBP29.05■■■□□ 2.24
CCDC189-205ENST00000543128 SPATA31D1Q6ZQQ2 1576 aa29.04■■■□□ 2.24
CCDC189-205ENST00000543128 ADAMTS8Q9UP79 889 aa28.99■■■□□ 2.23
CCDC189-205ENST00000543128 TULP4Q9NRJ4 1543 aa28.98■■■□□ 2.23
CCDC189-205ENST00000543128 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
CCDC189-205ENST00000543128 EVC2Q86UK5 1308 aa28.97■■■□□ 2.23
CCDC189-205ENST00000543128 USP32Q8NFA0 1604 aa28.96■■■□□ 2.23
CCDC189-205ENST00000543128 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
CCDC189-205ENST00000543128 SALL2Q9Y467 1007 aaPredicted RBP28.95■■■□□ 2.23
CCDC189-205ENST00000543128 SLC12A5Q9H2X9 1139 aa28.94■■■□□ 2.22
CCDC189-205ENST00000543128 NSD3Q9BZ95 1437 aa28.93■■■□□ 2.22
CCDC189-205ENST00000543128 ALKQ9UM73 1620 aa28.92■■■□□ 2.22
CCDC189-205ENST00000543128 STAG3Q9UJ98 1225 aa28.91■■■□□ 2.22
CCDC189-205ENST00000543128 A2ML1A8K2U0 1454 aa28.91■■■□□ 2.22
CCDC189-205ENST00000543128 PTPRMP28827 1452 aa28.91■■■□□ 2.22
CCDC189-205ENST00000543128 TNRQ92752 1358 aa28.9■■■□□ 2.22
CCDC189-205ENST00000543128 YTHDC2Q9H6S0 1430 aaKnown RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms