RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
C2CD3-218ENST00000542484 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
C2CD3-218ENST00000542484 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
C2CD3-218ENST00000542484 FAM117AQ9C073 453 aa9.34□□□□□ -0.91
C2CD3-218ENST00000542484 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
C2CD3-218ENST00000542484 SULF1Q8IWU6 871 aa9.32□□□□□ -0.92
C2CD3-218ENST00000542484 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
C2CD3-218ENST00000542484 SWT1Q5T5J6 900 aaKnown RBP9.31□□□□□ -0.92
C2CD3-218ENST00000542484 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
C2CD3-218ENST00000542484 IL27Q8NEV9 243 aa9.3□□□□□ -0.92
C2CD3-218ENST00000542484 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
C2CD3-218ENST00000542484 CD46P15529 392 aa9.29□□□□□ -0.92
C2CD3-218ENST00000542484 DDX11L8A8MPP1 907 aa9.28□□□□□ -0.92
C2CD3-218ENST00000542484 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
C2CD3-218ENST00000542484 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
C2CD3-218ENST00000542484 BEGAINQ9BUH8 593 aa9.28□□□□□ -0.92
C2CD3-218ENST00000542484 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
C2CD3-218ENST00000542484 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
C2CD3-218ENST00000542484 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
C2CD3-218ENST00000542484 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
C2CD3-218ENST00000542484 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
C2CD3-218ENST00000542484 RDH13Q8NBN7 331 aa9.24□□□□□ -0.93
C2CD3-218ENST00000542484 ANKK1Q8NFD2 765 aa9.24□□□□□ -0.93
C2CD3-218ENST00000542484 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
C2CD3-218ENST00000542484 GOLGA8CPA6NN73 597 aa9.23□□□□□ -0.93
C2CD3-218ENST00000542484 SLC10A3P09131 477 aa9.23□□□□□ -0.93
C2CD3-218ENST00000542484 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
C2CD3-218ENST00000542484 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
C2CD3-218ENST00000542484 SH3D19Q5HYK7 790 aa9.22□□□□□ -0.93
C2CD3-218ENST00000542484 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
C2CD3-218ENST00000542484 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
C2CD3-218ENST00000542484 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
C2CD3-218ENST00000542484 WNT2BQ93097 391 aa9.21□□□□□ -0.94
C2CD3-218ENST00000542484 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.94
C2CD3-218ENST00000542484 GCGRP47871 477 aa9.2□□□□□ -0.94
C2CD3-218ENST00000542484 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
C2CD3-218ENST00000542484 RNF40O75150 1001 aa9.19□□□□□ -0.94
C2CD3-218ENST00000542484 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
C2CD3-218ENST00000542484 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
C2CD3-218ENST00000542484 CFHP08603 1231 aa9.18□□□□□ -0.94
C2CD3-218ENST00000542484 BCAMP50895 628 aa9.18□□□□□ -0.94
C2CD3-218ENST00000542484 USP46P62068 366 aa9.18□□□□□ -0.94
C2CD3-218ENST00000542484 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
C2CD3-218ENST00000542484 KDM4AO75164 1064 aa9.17□□□□□ -0.94
C2CD3-218ENST00000542484 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
C2CD3-218ENST00000542484 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
C2CD3-218ENST00000542484 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
C2CD3-218ENST00000542484 GJA5P36382 358 aa9.15□□□□□ -0.94
C2CD3-218ENST00000542484 KMT5BQ4FZB7 885 aa9.15□□□□□ -0.94
C2CD3-218ENST00000542484 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
C2CD3-218ENST00000542484 PRR14Q9BWN1 585 aa9.15□□□□□ -0.94
C2CD3-218ENST00000542484 HOXA2O43364 376 aa9.14□□□□□ -0.95
C2CD3-218ENST00000542484 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
C2CD3-218ENST00000542484 PPP4CP60510 307 aa9.14□□□□□ -0.95
C2CD3-218ENST00000542484 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
C2CD3-218ENST00000542484 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
C2CD3-218ENST00000542484 SPTLC1O15269 473 aa9.13□□□□□ -0.95
C2CD3-218ENST00000542484 TUSC1Q2TAM9 212 aa9.13□□□□□ -0.95
C2CD3-218ENST00000542484 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
C2CD3-218ENST00000542484 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
C2CD3-218ENST00000542484 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
C2CD3-218ENST00000542484 FUT2Q10981 343 aa9.12□□□□□ -0.95
C2CD3-218ENST00000542484 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
C2CD3-218ENST00000542484 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
C2CD3-218ENST00000542484 POLR3EQ9NVU0 708 aa9.12□□□□□ -0.95
C2CD3-218ENST00000542484 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
C2CD3-218ENST00000542484 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
C2CD3-218ENST00000542484 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
C2CD3-218ENST00000542484 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
C2CD3-218ENST00000542484 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
C2CD3-218ENST00000542484 APLP1P51693 650 aa9.1□□□□□ -0.95
C2CD3-218ENST00000542484 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
C2CD3-218ENST00000542484 NDUFV2P19404 249 aa9.09□□□□□ -0.95
C2CD3-218ENST00000542484 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
C2CD3-218ENST00000542484 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
C2CD3-218ENST00000542484 FDX1P10109 184 aa9.07□□□□□ -0.96
C2CD3-218ENST00000542484 MORN1Q5T089 497 aa9.07□□□□□ -0.96
C2CD3-218ENST00000542484 SPNS2Q8IVW8 549 aa9.07□□□□□ -0.96
C2CD3-218ENST00000542484 HLA-CQ95604 372 aa9.07□□□□□ -0.96
C2CD3-218ENST00000542484 PCDHGC3Q9UN70 934 aa9.06□□□□□ -0.96
C2CD3-218ENST00000542484 GUCA2AQ02747 115 aa9.05□□□□□ -0.96
C2CD3-218ENST00000542484 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
C2CD3-218ENST00000542484 PPP2R2DQ66LE6 453 aa9.05□□□□□ -0.96
C2CD3-218ENST00000542484 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
C2CD3-218ENST00000542484 LILRB3O75022 631 aa9.04□□□□□ -0.96
C2CD3-218ENST00000542484 PUS10Q3MIT2 529 aaKnown RBP9.04□□□□□ -0.96
C2CD3-218ENST00000542484 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
C2CD3-218ENST00000542484 PTPN5P54829 565 aa9.03□□□□□ -0.96
C2CD3-218ENST00000542484 QPCTQ16769 361 aa9.03□□□□□ -0.96
C2CD3-218ENST00000542484 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
C2CD3-218ENST00000542484 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
C2CD3-218ENST00000542484 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
C2CD3-218ENST00000542484 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
C2CD3-218ENST00000542484 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
C2CD3-218ENST00000542484 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
C2CD3-218ENST00000542484 NR1I2O75469 434 aa9.01□□□□□ -0.97
C2CD3-218ENST00000542484 HRCP23327 699 aa9.01□□□□□ -0.97
C2CD3-218ENST00000542484 MTMR2Q13614 643 aa9.01□□□□□ -0.97
C2CD3-218ENST00000542484 Q3C1V9 767 aa9.01□□□□□ -0.97
C2CD3-218ENST00000542484 BLOC1S3Q6QNY0 202 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms