RNA–Protein interactions for RNA: ENST00000542436.1

SCNN1A-218, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-218ENST00000542436 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
SCNN1A-218ENST00000542436 TMEM131LA2VDJ0 1609 aa23.68■■□□□ 1.38
SCNN1A-218ENST00000542436 BCANQ96GW7 911 aa23.67■■□□□ 1.38
SCNN1A-218ENST00000542436 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
SCNN1A-218ENST00000542436 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
SCNN1A-218ENST00000542436 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
SCNN1A-218ENST00000542436 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
SCNN1A-218ENST00000542436 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-218ENST00000542436 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-218ENST00000542436 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-218ENST00000542436 RIMS2Q9UQ26 1411 aa23.63■■□□□ 1.37
SCNN1A-218ENST00000542436 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
SCNN1A-218ENST00000542436 FAM135BQ49AJ0 1406 aa23.6■■□□□ 1.37
SCNN1A-218ENST00000542436 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
SCNN1A-218ENST00000542436 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
SCNN1A-218ENST00000542436 ROBO1Q9Y6N7 1651 aa23.58■■□□□ 1.37
SCNN1A-218ENST00000542436 NUP155O75694 1391 aa23.58■■□□□ 1.37
SCNN1A-218ENST00000542436 CHGAP10645 457 aaKnown RBP23.58■■□□□ 1.37
SCNN1A-218ENST00000542436 ITGAEP38570 1179 aa23.58■■□□□ 1.37
SCNN1A-218ENST00000542436 DIP2AQ14689 1571 aa23.57■■□□□ 1.36
SCNN1A-218ENST00000542436 MSH6P52701 1360 aa23.57■■□□□ 1.36
SCNN1A-218ENST00000542436 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
SCNN1A-218ENST00000542436 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
SCNN1A-218ENST00000542436 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
SCNN1A-218ENST00000542436 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
SCNN1A-218ENST00000542436 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
SCNN1A-218ENST00000542436 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
SCNN1A-218ENST00000542436 TRPM2O94759 1503 aa23.49■■□□□ 1.35
SCNN1A-218ENST00000542436 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
SCNN1A-218ENST00000542436 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
SCNN1A-218ENST00000542436 RRBP1Q9P2E9 1410 aaKnown RBP23.45■■□□□ 1.34
SCNN1A-218ENST00000542436 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
SCNN1A-218ENST00000542436 SLAIN2Q9P270 581 aa23.44■■□□□ 1.34
SCNN1A-218ENST00000542436 C14orf37Q86TY3 774 aa23.43■■□□□ 1.34
SCNN1A-218ENST00000542436 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.41■■□□□ 1.34
SCNN1A-218ENST00000542436 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
SCNN1A-218ENST00000542436 NRXN3Q9Y4C0 1643 aa23.38■■□□□ 1.33
SCNN1A-218ENST00000542436 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
SCNN1A-218ENST00000542436 KIF1BO60333 1816 aa23.38■■□□□ 1.33
SCNN1A-218ENST00000542436 NAIPQ13075 1403 aa23.37■■□□□ 1.33
SCNN1A-218ENST00000542436 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
SCNN1A-218ENST00000542436 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
SCNN1A-218ENST00000542436 C19orf44Q9H6X5 657 aa23.36■■□□□ 1.33
SCNN1A-218ENST00000542436 JCADQ9P266 1359 aa23.36■■□□□ 1.33
SCNN1A-218ENST00000542436 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
SCNN1A-218ENST00000542436 COL16A1Q07092 1604 aaPredicted RBP23.35■■□□□ 1.33
SCNN1A-218ENST00000542436 ATF3P18847 181 aa23.35■■□□□ 1.33
SCNN1A-218ENST00000542436 AMOTL2Q9Y2J4 779 aa23.35■■□□□ 1.33
SCNN1A-218ENST00000542436 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
SCNN1A-218ENST00000542436 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
SCNN1A-218ENST00000542436 DCCP43146 1447 aa23.33■■□□□ 1.32
SCNN1A-218ENST00000542436 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
SCNN1A-218ENST00000542436 AHDC1Q5TGY3 1603 aaPredicted RBP23.32■■□□□ 1.32
SCNN1A-218ENST00000542436 HFM1A2PYH4 1435 aa23.3■■□□□ 1.32
SCNN1A-218ENST00000542436 SHPRHQ149N8 1683 aa23.27■■□□□ 1.32
SCNN1A-218ENST00000542436 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
SCNN1A-218ENST00000542436 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
SCNN1A-218ENST00000542436 METP08581 1390 aa23.24■■□□□ 1.31
SCNN1A-218ENST00000542436 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
SCNN1A-218ENST00000542436 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
SCNN1A-218ENST00000542436 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
SCNN1A-218ENST00000542436 NHSL1Q5SYE7 1610 aa23.2■■□□□ 1.3
SCNN1A-218ENST00000542436 ADGRL3Q9HAR2 1447 aa23.2■■□□□ 1.3
SCNN1A-218ENST00000542436 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
SCNN1A-218ENST00000542436 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
SCNN1A-218ENST00000542436 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
SCNN1A-218ENST00000542436 MST1RQ04912 1400 aa23.19■■□□□ 1.3
SCNN1A-218ENST00000542436 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
SCNN1A-218ENST00000542436 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
SCNN1A-218ENST00000542436 LRP6O75581 1613 aa23.18■■□□□ 1.3
SCNN1A-218ENST00000542436 PPLO60437 1756 aa23.17■■□□□ 1.3
SCNN1A-218ENST00000542436 RPGRIP1LQ68CZ1 1315 aa23.17■■□□□ 1.3
SCNN1A-218ENST00000542436 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
SCNN1A-218ENST00000542436 SETD5Q9C0A6 1442 aa23.13■■□□□ 1.29
SCNN1A-218ENST00000542436 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
SCNN1A-218ENST00000542436 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
SCNN1A-218ENST00000542436 LRRC59Q96AG4 307 aaKnown RBP23.09■■□□□ 1.29
SCNN1A-218ENST00000542436 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.29
SCNN1A-218ENST00000542436 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 LAMC1P11047 1609 aa23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
SCNN1A-218ENST00000542436 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
SCNN1A-218ENST00000542436 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
SCNN1A-218ENST00000542436 FOXD1Q16676 465 aa23.02■■□□□ 1.28
SCNN1A-218ENST00000542436 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SCNN1A-218ENST00000542436 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
SCNN1A-218ENST00000542436 CDC42BPGQ6DT37 1551 aa23■■□□□ 1.27
SCNN1A-218ENST00000542436 ANKRD30BQ9BXX2 1392 aa23■■□□□ 1.27
SCNN1A-218ENST00000542436 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
SCNN1A-218ENST00000542436 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
SCNN1A-218ENST00000542436 KNDC1Q76NI1 1749 aa22.97■■□□□ 1.27
SCNN1A-218ENST00000542436 RXRBP28702 533 aa22.97■■□□□ 1.27
SCNN1A-218ENST00000542436 AFF2P51816 1311 aa22.97■■□□□ 1.27
SCNN1A-218ENST00000542436 CDK12Q9NYV4 1490 aaPredicted RBP22.97■■□□□ 1.27
SCNN1A-218ENST00000542436 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
SCNN1A-218ENST00000542436 ADGRF5Q8IZF2 1346 aa22.95■■□□□ 1.26
SCNN1A-218ENST00000542436 TECPR2O15040 1411 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms