RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 CLTCL1P53675 1640 aa8.25□□□□□ -1.09
ATXN2-215ENST00000542287 SLC52A1Q9NWF4 448 aa8.25□□□□□ -1.09
ATXN2-215ENST00000542287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.24□□□□□ -1.093e-7■■□□□ 13.5
ATXN2-215ENST00000542287 STRCQ7RTU9 1775 aa8.24□□□□□ -1.09
ATXN2-215ENST00000542287 MED14O60244 1454 aa8.23□□□□□ -1.09
ATXN2-215ENST00000542287 CEBPAP49715 358 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-215ENST00000542287 IFT172Q9UG01 1749 aa8.22□□□□□ -1.09
ATXN2-215ENST00000542287 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.09
ATXN2-215ENST00000542287 MYO5BQ9ULV0 1848 aa8.21□□□□□ -1.1
ATXN2-215ENST00000542287 ANP32EQ9BTT0 268 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 DIP2AQ14689 1571 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 PPLO60437 1756 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 ANKRD30BQ9BXX2 1392 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 KCNA4P22459 653 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 PKD2Q13563 968 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 SLC4A1APQ9BWU0 796 aaKnown RBP8.2□□□□□ -1.1
ATXN2-215ENST00000542287 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
ATXN2-215ENST00000542287 CFAP65Q6ZU64 1925 aaKnown RBP8.2□□□□□ -1.1
ATXN2-215ENST00000542287 IQGAP1P46940 1657 aa8.19□□□□□ -1.1
ATXN2-215ENST00000542287 THEMISQ8N1K5 641 aaPredicted RBP8.19□□□□□ -1.1
ATXN2-215ENST00000542287 NEXMIFQ5QGS0 1516 aa8.19□□□□□ -1.1
ATXN2-215ENST00000542287 TMEM2Q9UHN6 1383 aa8.18□□□□□ -1.1
ATXN2-215ENST00000542287 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
ATXN2-215ENST00000542287 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
ATXN2-215ENST00000542287 SPATA31E1Q6ZUB1 1445 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 SETBP1Q9Y6X0 1596 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 CCDC144AA2RUR9 1427 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
ATXN2-215ENST00000542287 IDI1Q13907 227 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 NBPF8Q3BBV2 869 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 DMRT2Q9Y5R5 561 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 LAMC1P11047 1609 aa8.17□□□□□ -1.1
ATXN2-215ENST00000542287 MYOM2P54296 1465 aa8.16□□□□□ -1.1
ATXN2-215ENST00000542287 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.16□□□□□ -1.1
ATXN2-215ENST00000542287 RIMS2Q9UQ26 1411 aa8.16□□□□□ -1.1
ATXN2-215ENST00000542287 HDGFP51858 240 aaKnown RBP8.16□□□□□ -1.1
ATXN2-215ENST00000542287 NWD1Q149M9 1564 aa8.15□□□□□ -1.1
ATXN2-215ENST00000542287 PLEKHG1Q9ULL1 1385 aa8.15□□□□□ -1.1
ATXN2-215ENST00000542287 NRXN1Q9ULB1 1477 aa8.15□□□□□ -1.1
ATXN2-215ENST00000542287 NPHP4O75161 1426 aaPredicted RBP8.15□□□□□ -1.1
ATXN2-215ENST00000542287 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
ATXN2-215ENST00000542287 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
ATXN2-215ENST00000542287 SETD1AO15047 1707 aaKnown RBP8.14□□□□□ -1.11
ATXN2-215ENST00000542287 IQSEC2Q5JU85 1478 aa8.14□□□□□ -1.11
ATXN2-215ENST00000542287 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
ATXN2-215ENST00000542287 KIAA1210Q9ULL0 1709 aa8.14□□□□□ -1.11
ATXN2-215ENST00000542287 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
ATXN2-215ENST00000542287 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
ATXN2-215ENST00000542287 PRAG1Q86YV5 1406 aa8.14□□□□□ -1.11
ATXN2-215ENST00000542287 PIK3R4Q99570 1358 aa8.13□□□□□ -1.11
ATXN2-215ENST00000542287 CPS1P31327 1500 aa8.12□□□□□ -1.11
ATXN2-215ENST00000542287 ANP32CO43423 234 aa8.12□□□□□ -1.11
ATXN2-215ENST00000542287 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.113e-9■■■■□ 21.5
ATXN2-215ENST00000542287 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
ATXN2-215ENST00000542287 CHD2O14647 1828 aaKnown RBP8.11□□□□□ -1.11
ATXN2-215ENST00000542287 KNDC1Q76NI1 1749 aa8.11□□□□□ -1.11
ATXN2-215ENST00000542287 LTBP4Q8N2S1 1624 aa8.11□□□□□ -1.11
ATXN2-215ENST00000542287 STAG3Q9UJ98 1225 aa8.1□□□□□ -1.11
ATXN2-215ENST00000542287 XRN1Q8IZH2 1706 aaKnown RBP8.1□□□□□ -1.11
ATXN2-215ENST00000542287 HSPA2P54652 639 aa8.1□□□□□ -1.11
ATXN2-215ENST00000542287 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
ATXN2-215ENST00000542287 NCKAP5LQ9HCH0 1330 aa8.1□□□□□ -1.11
ATXN2-215ENST00000542287 ADAMTS13Q76LX8 1427 aa8.09□□□□□ -1.11
ATXN2-215ENST00000542287 CCER2I3L3R5 266 aa8.09□□□□□ -1.11
ATXN2-215ENST00000542287 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
ATXN2-215ENST00000542287 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.12
ATXN2-215ENST00000542287 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.12
ATXN2-215ENST00000542287 ALKQ9UM73 1620 aa8.08□□□□□ -1.12
ATXN2-215ENST00000542287 VGFO15240 615 aaPredicted RBP8.08□□□□□ -1.12
ATXN2-215ENST00000542287 LTKP29376 864 aa8.08□□□□□ -1.12
ATXN2-215ENST00000542287 STRCP1A6NGW2 1772 aa8.08□□□□□ -1.12
ATXN2-215ENST00000542287 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
ATXN2-215ENST00000542287 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
ATXN2-215ENST00000542287 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
ATXN2-215ENST00000542287 CCDC7Q96M83 1385 aa8.07□□□□□ -1.12
ATXN2-215ENST00000542287 PIAS4Q8N2W9 510 aaPredicted RBP8.07□□□□□ -1.12
ATXN2-215ENST00000542287 CCDC184Q52MB2 194 aa8.06□□□□□ -1.12
ATXN2-215ENST00000542287 DLC1Q96QB1 1528 aa8.06□□□□□ -1.12
ATXN2-215ENST00000542287 KIF7Q2M1P5 1343 aa8.06□□□□□ -1.12
ATXN2-215ENST00000542287 XIRP1Q702N8 1843 aaKnown RBP8.05□□□□□ -1.12
ATXN2-215ENST00000542287 TECPR2O15040 1411 aa8.05□□□□□ -1.12
ATXN2-215ENST00000542287 CHGAP10645 457 aaKnown RBP8.05□□□□□ -1.12
ATXN2-215ENST00000542287 PTCH1Q13635 1447 aa8.05□□□□□ -1.12
ATXN2-215ENST00000542287 TRPM1Q7Z4N2 1603 aa8.05□□□□□ -1.12
ATXN2-215ENST00000542287 ASXL1Q8IXJ9 1541 aa8.05□□□□□ -1.12
ATXN2-215ENST00000542287 ADGRB1O14514 1584 aa8.04□□□□□ -1.12
ATXN2-215ENST00000542287 KDM2AQ9Y2K7 1162 aa8.04□□□□□ -1.12
ATXN2-215ENST00000542287 KCNA6P17658 529 aa8.03□□□□□ -1.12
ATXN2-215ENST00000542287 USP47Q96K76 1375 aa8.03□□□□□ -1.12
ATXN2-215ENST00000542287 SIRT1Q96EB6 747 aa8.03□□□□□ -1.12
ATXN2-215ENST00000542287 LRRC7Q96NW7 1537 aa8.03□□□□□ -1.12
ATXN2-215ENST00000542287 C14orf93Q9H972 538 aaKnown RBP8.02□□□□□ -1.13
ATXN2-215ENST00000542287 LRPPRCP42704 1394 aaKnown RBP8.02□□□□□ -1.13
ATXN2-215ENST00000542287 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
ATXN2-215ENST00000542287 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
ATXN2-215ENST00000542287 PTPRUQ92729 1446 aa8.02□□□□□ -1.13
ATXN2-215ENST00000542287 FAM135BQ49AJ0 1406 aa8.01□□□□□ -1.13
ATXN2-215ENST00000542287 ADGRF5Q8IZF2 1346 aa8.01□□□□□ -1.13
ATXN2-215ENST00000542287 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms