RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 NUTM2DQ5VT03 806 aaPredicted RBP27.59■■■□□ 2.01
PTPN6-216ENST00000542277 TBX22Q9Y458 520 aa27.58■■■□□ 2.01
PTPN6-216ENST00000542277 RPRD2Q5VT52 1461 aaKnown RBP27.57■■■□□ 2
PTPN6-216ENST00000542277 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
PTPN6-216ENST00000542277 SLAIN2Q9P270 581 aa27.57■■■□□ 2
PTPN6-216ENST00000542277 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
PTPN6-216ENST00000542277 RIMS2Q9UQ26 1411 aa27.57■■■□□ 2
PTPN6-216ENST00000542277 ADGRB3O60242 1522 aa27.57■■■□□ 2
PTPN6-216ENST00000542277 KDM5AP29375 1690 aaKnown RBP27.56■■■□□ 2
PTPN6-216ENST00000542277 ITGAEP38570 1179 aa27.56■■■□□ 2
PTPN6-216ENST00000542277 ZFYVE9O95405 1425 aa27.56■■■□□ 2
PTPN6-216ENST00000542277 PLEKHG1Q9ULL1 1385 aa27.55■■■□□ 2
PTPN6-216ENST00000542277 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.54■■■□□ 2
PTPN6-216ENST00000542277 MSH6P52701 1360 aa27.5■■□□□ 1.99
PTPN6-216ENST00000542277 ROCK1Q13464 1354 aa27.5■■□□□ 1.99
PTPN6-216ENST00000542277 NUP155O75694 1391 aa27.49■■□□□ 1.99
PTPN6-216ENST00000542277 POTEAQ6S8J7 498 aa27.48■■□□□ 1.99
PTPN6-216ENST00000542277 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
PTPN6-216ENST00000542277 TMEM131LA2VDJ0 1609 aa27.43■■□□□ 1.98
PTPN6-216ENST00000542277 C14orf37Q86TY3 774 aa27.43■■□□□ 1.98
PTPN6-216ENST00000542277 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
PTPN6-216ENST00000542277 NWD1Q149M9 1564 aa27.41■■□□□ 1.98
PTPN6-216ENST00000542277 C19orf44Q9H6X5 657 aa27.4■■□□□ 1.98
PTPN6-216ENST00000542277 AMOTL2Q9Y2J4 779 aa27.4■■□□□ 1.98
PTPN6-216ENST00000542277 ROBO1Q9Y6N7 1651 aa27.38■■□□□ 1.97
PTPN6-216ENST00000542277 UNC13BO14795 1591 aa27.37■■□□□ 1.97
PTPN6-216ENST00000542277 NCOA3Q9Y6Q9 1424 aa27.37■■□□□ 1.97
PTPN6-216ENST00000542277 ATF3P18847 181 aa27.35■■□□□ 1.97
PTPN6-216ENST00000542277 CADPS2Q86UW7 1296 aa27.35■■□□□ 1.97
PTPN6-216ENST00000542277 MYO5BQ9ULV0 1848 aa27.34■■□□□ 1.97
PTPN6-216ENST00000542277 PIK3R4Q99570 1358 aa27.34■■□□□ 1.97
PTPN6-216ENST00000542277 E9PCH4 1651 aa27.33■■□□□ 1.97
PTPN6-216ENST00000542277 JCADQ9P266 1359 aa27.33■■□□□ 1.97
PTPN6-216ENST00000542277 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
PTPN6-216ENST00000542277 GCC2Q8IWJ2 1684 aa27.32■■□□□ 1.96
PTPN6-216ENST00000542277 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
PTPN6-216ENST00000542277 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
PTPN6-216ENST00000542277 IQGAP3Q86VI3 1631 aa27.27■■□□□ 1.96
PTPN6-216ENST00000542277 BRINP3Q76B58 766 aa27.25■■□□□ 1.95
PTPN6-216ENST00000542277 METP08581 1390 aa27.22■■□□□ 1.95
PTPN6-216ENST00000542277 SPATA31A6Q5VVP1 1343 aa27.2■■□□□ 1.95
PTPN6-216ENST00000542277 PHLPP1O60346 1717 aa27.19■■□□□ 1.94
PTPN6-216ENST00000542277 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
PTPN6-216ENST00000542277 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
PTPN6-216ENST00000542277 TRPM2O94759 1503 aa27.16■■□□□ 1.94
PTPN6-216ENST00000542277 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.15■■□□□ 1.94
PTPN6-216ENST00000542277 NUTM2BA6NNL0 878 aaPredicted RBP27.14■■□□□ 1.94
PTPN6-216ENST00000542277 NUTM2EB1AL46 878 aaPredicted RBP27.14■■□□□ 1.94
PTPN6-216ENST00000542277 NUTM2AQ8IVF1 878 aaPredicted RBP27.14■■□□□ 1.94
PTPN6-216ENST00000542277 TRIM52Q96A61 297 aa27.14■■□□□ 1.94
PTPN6-216ENST00000542277 COL16A1Q07092 1604 aaPredicted RBP27.14■■□□□ 1.94
PTPN6-216ENST00000542277 LRP6O75581 1613 aa27.12■■□□□ 1.93
PTPN6-216ENST00000542277 ZNF772Q68DY9 489 aaPredicted RBP27.12■■□□□ 1.93
PTPN6-216ENST00000542277 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
PTPN6-216ENST00000542277 NAIPQ13075 1403 aa27.12■■□□□ 1.93
PTPN6-216ENST00000542277 RRBP1Q9P2E9 1410 aaKnown RBP27.09■■□□□ 1.93
PTPN6-216ENST00000542277 SETBP1Q9Y6X0 1596 aa27.08■■□□□ 1.93
PTPN6-216ENST00000542277 VGFO15240 615 aaPredicted RBP27.07■■□□□ 1.92
PTPN6-216ENST00000542277 LRRC59Q96AG4 307 aaKnown RBP27.07■■□□□ 1.92
PTPN6-216ENST00000542277 AHDC1Q5TGY3 1603 aaPredicted RBP27.07■■□□□ 1.92
PTPN6-216ENST00000542277 NRXN3Q9Y4C0 1643 aa27.07■■□□□ 1.92
PTPN6-216ENST00000542277 DCCP43146 1447 aa27.07■■□□□ 1.92
PTPN6-216ENST00000542277 MST1RQ04912 1400 aa27.07■■□□□ 1.92
PTPN6-216ENST00000542277 SLC4A1APQ9BWU0 796 aaKnown RBP27.05■■□□□ 1.92
PTPN6-216ENST00000542277 RXRBP28702 533 aa27.03■■□□□ 1.92
PTPN6-216ENST00000542277 SPHKAPQ2M3C7 1700 aa27.02■■□□□ 1.92
PTPN6-216ENST00000542277 SETD5Q9C0A6 1442 aa27.01■■□□□ 1.91
PTPN6-216ENST00000542277 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
PTPN6-216ENST00000542277 CLTCL1P53675 1640 aa27■■□□□ 1.91
PTPN6-216ENST00000542277 XRN1Q8IZH2 1706 aaKnown RBP26.99■■□□□ 1.91
PTPN6-216ENST00000542277 RPGRIP1LQ68CZ1 1315 aa26.99■■□□□ 1.91
PTPN6-216ENST00000542277 FOXD1Q16676 465 aa26.99■■□□□ 1.91
PTPN6-216ENST00000542277 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
PTPN6-216ENST00000542277 ORAI2Q96SN7 254 aa26.99■■□□□ 1.91
PTPN6-216ENST00000542277 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
PTPN6-216ENST00000542277 ADGRL3Q9HAR2 1447 aa26.99■■□□□ 1.91
PTPN6-216ENST00000542277 AFF2P51816 1311 aa26.98■■□□□ 1.91
PTPN6-216ENST00000542277 ROBO2Q9HCK4 1378 aa26.97■■□□□ 1.91
PTPN6-216ENST00000542277 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
PTPN6-216ENST00000542277 C8orf37Q96NL8 207 aa26.94■■□□□ 1.9
PTPN6-216ENST00000542277 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
PTPN6-216ENST00000542277 QTRT2Q9H974 415 aaKnown RBP26.93■■□□□ 1.9
PTPN6-216ENST00000542277 PNPLA6Q8IY17 1366 aa26.92■■□□□ 1.9
PTPN6-216ENST00000542277 SHPRHQ149N8 1683 aa26.92■■□□□ 1.9
PTPN6-216ENST00000542277 ADAMTS2O95450 1211 aa26.9■■□□□ 1.9
PTPN6-216ENST00000542277 RGL3Q3MIN7 710 aa26.89■■□□□ 1.9
PTPN6-216ENST00000542277 ADGRF5Q8IZF2 1346 aa26.89■■□□□ 1.89
PTPN6-216ENST00000542277 SETD1AO15047 1707 aaKnown RBP26.88■■□□□ 1.89
PTPN6-216ENST00000542277 NGLY1Q96IV0 654 aa26.88■■□□□ 1.89
PTPN6-216ENST00000542277 SOS2Q07890 1332 aaPredicted RBP26.88■■□□□ 1.89
PTPN6-216ENST00000542277 PTCH1Q13635 1447 aa26.86■■□□□ 1.89
PTPN6-216ENST00000542277 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
PTPN6-216ENST00000542277 MPHOSPH9Q99550 1183 aa26.85■■□□□ 1.89
PTPN6-216ENST00000542277 STK26Q9P289 416 aa26.85■■□□□ 1.89
PTPN6-216ENST00000542277 ESCO1Q5FWF5 840 aa26.83■■□□□ 1.89
PTPN6-216ENST00000542277 WAPLQ7Z5K2 1190 aa26.83■■□□□ 1.89
PTPN6-216ENST00000542277 KIF1BO60333 1816 aa26.82■■□□□ 1.88
PTPN6-216ENST00000542277 NHSL1Q5SYE7 1610 aa26.81■■□□□ 1.88
PTPN6-216ENST00000542277 TMEM132EQ6IEE7 984 aa26.81■■□□□ 1.88
PTPN6-216ENST00000542277 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms