RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
ERBB2-204ENST00000541774 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
ERBB2-204ENST00000541774 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 DYNC1I1O14576 645 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
ERBB2-204ENST00000541774 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.23
ERBB2-204ENST00000541774 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.23
ERBB2-204ENST00000541774 MCTP1Q6DN14 999 aa13.58□□□□□ -0.23
ERBB2-204ENST00000541774 CLUAP1Q96AJ1 413 aa13.58□□□□□ -0.23
ERBB2-204ENST00000541774 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.23
ERBB2-204ENST00000541774 MPNDQ8N594 471 aa13.58□□□□□ -0.24
ERBB2-204ENST00000541774 SPAG9O60271 1321 aaKnown RBP13.58□□□□□ -0.24
ERBB2-204ENST00000541774 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-204ENST00000541774 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.24
ERBB2-204ENST00000541774 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
ERBB2-204ENST00000541774 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
ERBB2-204ENST00000541774 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
ERBB2-204ENST00000541774 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-204ENST00000541774 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-204ENST00000541774 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
ERBB2-204ENST00000541774 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
ERBB2-204ENST00000541774 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
ERBB2-204ENST00000541774 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
ERBB2-204ENST00000541774 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
ERBB2-204ENST00000541774 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
ERBB2-204ENST00000541774 IGSF3O75054 1194 aa13.54□□□□□ -0.24
ERBB2-204ENST00000541774 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
ERBB2-204ENST00000541774 TSPYL1Q9H0U9 437 aa13.53□□□□□ -0.24
ERBB2-204ENST00000541774 CALRP27797 417 aaKnown RBP13.53□□□□□ -0.24
ERBB2-204ENST00000541774 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
ERBB2-204ENST00000541774 CALCOCO1Q9P1Z2 691 aa13.53□□□□□ -0.24
ERBB2-204ENST00000541774 PLB1Q6P1J6 1458 aa13.53□□□□□ -0.24
ERBB2-204ENST00000541774 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
ERBB2-204ENST00000541774 STK26Q9P289 416 aa13.53□□□□□ -0.24
ERBB2-204ENST00000541774 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
ERBB2-204ENST00000541774 KIF20AO95235 890 aa13.52□□□□□ -0.25
ERBB2-204ENST00000541774 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
ERBB2-204ENST00000541774 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
ERBB2-204ENST00000541774 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
ERBB2-204ENST00000541774 CCDC94Q9BW85 323 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-204ENST00000541774 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
ERBB2-204ENST00000541774 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
ERBB2-204ENST00000541774 OFD1O75665 1012 aa13.5□□□□□ -0.25
ERBB2-204ENST00000541774 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-204ENST00000541774 ST18O60284 1047 aa13.5□□□□□ -0.25
ERBB2-204ENST00000541774 NUCB2P80303 420 aa13.5□□□□□ -0.25
ERBB2-204ENST00000541774 MCCP23508 829 aa13.5□□□□□ -0.25
ERBB2-204ENST00000541774 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
ERBB2-204ENST00000541774 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
ERBB2-204ENST00000541774 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
ERBB2-204ENST00000541774 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
ERBB2-204ENST00000541774 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-204ENST00000541774 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
ERBB2-204ENST00000541774 GPATCH11Q8N954 259 aa13.48□□□□□ -0.25
ERBB2-204ENST00000541774 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
ERBB2-204ENST00000541774 NPHP1O15259 732 aa13.48□□□□□ -0.25
ERBB2-204ENST00000541774 GNL2Q13823 731 aaKnown RBP13.48□□□□□ -0.25
ERBB2-204ENST00000541774 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
ERBB2-204ENST00000541774 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
ERBB2-204ENST00000541774 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.25
ERBB2-204ENST00000541774 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
ERBB2-204ENST00000541774 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
ERBB2-204ENST00000541774 CCAR2Q8N163 923 aaKnown RBP13.46□□□□□ -0.25
ERBB2-204ENST00000541774 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.26
ERBB2-204ENST00000541774 GRIN2AQ12879 1464 aa13.46□□□□□ -0.26
ERBB2-204ENST00000541774 TIAM1Q13009 1591 aa13.46□□□□□ -0.26
ERBB2-204ENST00000541774 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
ERBB2-204ENST00000541774 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
ERBB2-204ENST00000541774 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
ERBB2-204ENST00000541774 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
ERBB2-204ENST00000541774 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
ERBB2-204ENST00000541774 APBB1O00213 710 aa13.44□□□□□ -0.26
ERBB2-204ENST00000541774 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
ERBB2-204ENST00000541774 KANK1Q14678 1352 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
ERBB2-204ENST00000541774 RAPGEF3O95398 923 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
ERBB2-204ENST00000541774 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 TRIM34Q9BYJ4 488 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 TPD52L1Q16890 204 aaPredicted RBP13.42□□□□□ -0.26
ERBB2-204ENST00000541774 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
ERBB2-204ENST00000541774 GTF2A1P52655 376 aaPredicted RBP13.41□□□□□ -0.26
ERBB2-204ENST00000541774 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
ERBB2-204ENST00000541774 SOX12O15370 315 aa13.41□□□□□ -0.26
ERBB2-204ENST00000541774 TPM3P06753 285 aa13.4□□□□□ -0.26
ERBB2-204ENST00000541774 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
ERBB2-204ENST00000541774 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
ERBB2-204ENST00000541774 MBD3O95983 291 aa13.4□□□□□ -0.26
ERBB2-204ENST00000541774 TMF1P82094 1093 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms