RNA–Protein interactions for RNA: ENST00000541537.5

DDX47-206, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 1,517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-206ENST00000541537 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
DDX47-206ENST00000541537 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
DDX47-206ENST00000541537 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
DDX47-206ENST00000541537 CHGAP10645 457 aaKnown RBP15.08■□□□□ 0.01
DDX47-206ENST00000541537 NEUROD1Q13562 356 aa15.07■□□□□ 0
DDX47-206ENST00000541537 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
DDX47-206ENST00000541537 IFT172Q9UG01 1749 aa15.05■□□□□ -0
DDX47-206ENST00000541537 SLIT1O75093 1534 aa15.04■□□□□ -0
DDX47-206ENST00000541537 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
DDX47-206ENST00000541537 RGL3Q3MIN7 710 aa15.04■□□□□ -0
DDX47-206ENST00000541537 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
DDX47-206ENST00000541537 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
DDX47-206ENST00000541537 ARHGAP23Q9P227 1491 aa15.04■□□□□ -0
DDX47-206ENST00000541537 PPLO60437 1756 aa15.04■□□□□ -0
DDX47-206ENST00000541537 ZNF326Q5BKZ1 582 aaKnown RBP15.03■□□□□ -0
DDX47-206ENST00000541537 ZFYVE9O95405 1425 aa15.03■□□□□ -0
DDX47-206ENST00000541537 TONSLQ96HA7 1378 aa15.02□□□□□ -0.01
DDX47-206ENST00000541537 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
DDX47-206ENST00000541537 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
DDX47-206ENST00000541537 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
DDX47-206ENST00000541537 HSPA2P54652 639 aa14.99□□□□□ -0.01
DDX47-206ENST00000541537 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
DDX47-206ENST00000541537 MYOM2P54296 1465 aa14.99□□□□□ -0.01
DDX47-206ENST00000541537 SCAF11Q99590 1463 aaKnown RBP14.98□□□□□ -0.01
DDX47-206ENST00000541537 LTKP29376 864 aa14.97□□□□□ -0.01
DDX47-206ENST00000541537 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
DDX47-206ENST00000541537 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
DDX47-206ENST00000541537 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.02
DDX47-206ENST00000541537 TXNDC2Q86VQ3 553 aa14.96□□□□□ -0.02
DDX47-206ENST00000541537 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.02
DDX47-206ENST00000541537 EID1Q9Y6B2 187 aa14.96□□□□□ -0.02
DDX47-206ENST00000541537 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
DDX47-206ENST00000541537 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
DDX47-206ENST00000541537 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
DDX47-206ENST00000541537 ANKLE2Q86XL3 938 aa14.95□□□□□ -0.02
DDX47-206ENST00000541537 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
DDX47-206ENST00000541537 PPP1R15AO75807 674 aaPredicted RBP14.94□□□□□ -0.02
DDX47-206ENST00000541537 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
DDX47-206ENST00000541537 KDM2AQ9Y2K7 1162 aa14.94□□□□□ -0.02
DDX47-206ENST00000541537 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
DDX47-206ENST00000541537 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
DDX47-206ENST00000541537 PIK3C2GO75747 1445 aa14.93□□□□□ -0.02
DDX47-206ENST00000541537 MED14O60244 1454 aa14.93□□□□□ -0.02
DDX47-206ENST00000541537 NRXN3Q9Y4C0 1643 aa14.93□□□□□ -0.02
DDX47-206ENST00000541537 IQGAP1P46940 1657 aa14.92□□□□□ -0.02
DDX47-206ENST00000541537 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
DDX47-206ENST00000541537 SETBP1Q9Y6X0 1596 aa14.92□□□□□ -0.02
DDX47-206ENST00000541537 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
DDX47-206ENST00000541537 NPHP4O75161 1426 aaPredicted RBP14.9□□□□□ -0.02
DDX47-206ENST00000541537 LAMC1P11047 1609 aa14.89□□□□□ -0.03
DDX47-206ENST00000541537 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
DDX47-206ENST00000541537 ADAMTS13Q76LX8 1427 aa14.89□□□□□ -0.03
DDX47-206ENST00000541537 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
DDX47-206ENST00000541537 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
DDX47-206ENST00000541537 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
DDX47-206ENST00000541537 KIAA1210Q9ULL0 1709 aa14.87□□□□□ -0.03
DDX47-206ENST00000541537 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
DDX47-206ENST00000541537 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
DDX47-206ENST00000541537 BCANQ96GW7 911 aa14.86□□□□□ -0.03
DDX47-206ENST00000541537 CFAP70Q5T0N1 1121 aa14.84□□□□□ -0.03
DDX47-206ENST00000541537 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
DDX47-206ENST00000541537 C14orf93Q9H972 538 aaKnown RBP14.84□□□□□ -0.03
DDX47-206ENST00000541537 ASXL1Q8IXJ9 1541 aa14.84□□□□□ -0.03
DDX47-206ENST00000541537 RALGAPBQ86X10 1494 aa14.84□□□□□ -0.03
DDX47-206ENST00000541537 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
DDX47-206ENST00000541537 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
DDX47-206ENST00000541537 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
DDX47-206ENST00000541537 METP08581 1390 aa14.82□□□□□ -0.04
DDX47-206ENST00000541537 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
DDX47-206ENST00000541537 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
DDX47-206ENST00000541537 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
DDX47-206ENST00000541537 PIK3R4Q99570 1358 aa14.79□□□□□ -0.04
DDX47-206ENST00000541537 CHD2O14647 1828 aaKnown RBP14.79□□□□□ -0.04
DDX47-206ENST00000541537 TMEM132EQ6IEE7 984 aa14.78□□□□□ -0.04
DDX47-206ENST00000541537 XRN1Q8IZH2 1706 aaKnown RBP14.78□□□□□ -0.04
DDX47-206ENST00000541537 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
DDX47-206ENST00000541537 PTPRUQ92729 1446 aa14.77□□□□□ -0.04
DDX47-206ENST00000541537 YTHDC2Q9H6S0 1430 aaKnown RBP14.77□□□□□ -0.05
DDX47-206ENST00000541537 KNDC1Q76NI1 1749 aa14.76□□□□□ -0.05
DDX47-206ENST00000541537 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
DDX47-206ENST00000541537 TECPR2O15040 1411 aa14.75□□□□□ -0.05
DDX47-206ENST00000541537 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
DDX47-206ENST00000541537 CPS1P31327 1500 aa14.74□□□□□ -0.05
DDX47-206ENST00000541537 ARHGEF28Q8N1W1 1705 aaKnown RBP14.74□□□□□ -0.05
DDX47-206ENST00000541537 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
DDX47-206ENST00000541537 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
DDX47-206ENST00000541537 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
DDX47-206ENST00000541537 NKTRP30414 1462 aaKnown RBP14.73□□□□□ -0.05
DDX47-206ENST00000541537 DLC1Q96QB1 1528 aa14.73□□□□□ -0.05
DDX47-206ENST00000541537 KCNA6P17658 529 aa14.72□□□□□ -0.05
DDX47-206ENST00000541537 STK26Q9P289 416 aa14.72□□□□□ -0.05
DDX47-206ENST00000541537 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
DDX47-206ENST00000541537 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
DDX47-206ENST00000541537 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.06
DDX47-206ENST00000541537 ROBO2Q9HCK4 1378 aa14.7□□□□□ -0.06
DDX47-206ENST00000541537 FAM135BQ49AJ0 1406 aa14.69□□□□□ -0.06
DDX47-206ENST00000541537 USP47Q96K76 1375 aa14.69□□□□□ -0.06
DDX47-206ENST00000541537 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
DDX47-206ENST00000541537 LTBP4Q8N2S1 1624 aa14.67□□□□□ -0.06
DDX47-206ENST00000541537 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms