RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 DPYSL4O14531 572 aa8.08□□□□□ -1.12
DDB1-219ENST00000541513 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
DDB1-219ENST00000541513 DRC1Q96MC2 740 aa8.08□□□□□ -1.12
DDB1-219ENST00000541513 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
DDB1-219ENST00000541513 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
DDB1-219ENST00000541513 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
DDB1-219ENST00000541513 CWC22Q9HCG8 908 aaKnown RBP8.07□□□□□ -1.12
DDB1-219ENST00000541513 SNRKQ9NRH2 765 aa8.07□□□□□ -1.12
DDB1-219ENST00000541513 PCDHB8Q9UN66 801 aa8.07□□□□□ -1.12
DDB1-219ENST00000541513 CCDC88BA6NC98 1476 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 FCHSD2O94868 740 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 PPP1R15BQ5SWA1 713 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 UBE2Q2Q8WVN8 375 aa8.06□□□□□ -1.12
DDB1-219ENST00000541513 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
DDB1-219ENST00000541513 MRRFQ96E11 262 aaKnown RBP8.06□□□□□ -1.12
DDB1-219ENST00000541513 NCLP19338 710 aaKnown RBP8.05□□□□□ -1.12
DDB1-219ENST00000541513 FECHP22830 423 aa8.05□□□□□ -1.12
DDB1-219ENST00000541513 EMILIN3Q9NT22 766 aa8.05□□□□□ -1.12
DDB1-219ENST00000541513 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
DDB1-219ENST00000541513 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
DDB1-219ENST00000541513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.03□□□□□ -1.12
DDB1-219ENST00000541513 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
DDB1-219ENST00000541513 TCF3P15923 654 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 CLCN1P35523 988 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 RFC5P40937 340 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 IRX5P78411 483 aaPredicted RBP8.03□□□□□ -1.12
DDB1-219ENST00000541513 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 CFAP70Q5T0N1 1121 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 ANKRD13AQ8IZ07 590 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
DDB1-219ENST00000541513 CFTRP13569 1480 aa8.02□□□□□ -1.13
DDB1-219ENST00000541513 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
DDB1-219ENST00000541513 MS4A4AQ96JQ5 239 aa8.02□□□□□ -1.13
DDB1-219ENST00000541513 NESP48681 1621 aa8.02□□□□□ -1.13
DDB1-219ENST00000541513 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
DDB1-219ENST00000541513 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
DDB1-219ENST00000541513 DNAJC14Q6Y2X3 702 aaPredicted RBP8.01□□□□□ -1.13
DDB1-219ENST00000541513 MTMR14Q8NCE2 650 aa8.01□□□□□ -1.13
DDB1-219ENST00000541513 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
DDB1-219ENST00000541513 SNPHO15079 494 aa8□□□□□ -1.13
DDB1-219ENST00000541513 PLCG2P16885 1265 aa8□□□□□ -1.13
DDB1-219ENST00000541513 SIRT1Q96EB6 747 aa8□□□□□ -1.13
DDB1-219ENST00000541513 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
DDB1-219ENST00000541513 CABP2Q9NPB3 220 aa8□□□□□ -1.13
DDB1-219ENST00000541513 GPCPD1Q9NPB8 672 aa8□□□□□ -1.13
DDB1-219ENST00000541513 GPHNQ9NQX3 736 aaPredicted RBP8□□□□□ -1.13
DDB1-219ENST00000541513 ZC3H4Q9UPT8 1303 aaKnown RBP8□□□□□ -1.13
DDB1-219ENST00000541513 PPP2R2DQ66LE6 453 aa7.99□□□□□ -1.13
DDB1-219ENST00000541513 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
DDB1-219ENST00000541513 UBXN4Q92575 508 aa7.99□□□□□ -1.13
DDB1-219ENST00000541513 KIF21AQ7Z4S6 1674 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 PDS5BQ9NTI5 1447 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 CARNS1A5YM72 827 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 ZNF16P17020 682 aaPredicted RBP7.98□□□□□ -1.13
DDB1-219ENST00000541513 OSBPP22059 807 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 EMP3P54852 163 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 PRM3Q9NNZ6 103 aa7.98□□□□□ -1.13
DDB1-219ENST00000541513 VAMP1P23763 118 aa7.97□□□□□ -1.13
DDB1-219ENST00000541513 SSTR3P32745 418 aaPredicted RBP7.97□□□□□ -1.13
DDB1-219ENST00000541513 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
DDB1-219ENST00000541513 POLR3EQ9NVU0 708 aa7.97□□□□□ -1.13
DDB1-219ENST00000541513 ATG7O95352 703 aa7.96□□□□□ -1.14
DDB1-219ENST00000541513 CERS3Q8IU89 383 aa7.96□□□□□ -1.14
DDB1-219ENST00000541513 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
DDB1-219ENST00000541513 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
DDB1-219ENST00000541513 ABL2P42684 1182 aa7.95□□□□□ -1.14
DDB1-219ENST00000541513 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
DDB1-219ENST00000541513 PTGDRQ13258 359 aa7.95□□□□□ -1.14
DDB1-219ENST00000541513 ADAMTS19Q8TE59 1207 aa7.95□□□□□ -1.14
DDB1-219ENST00000541513 PPP1R12CQ9BZL4 782 aa7.95□□□□□ -1.14
DDB1-219ENST00000541513 ERCC6Q03468 1493 aa7.94□□□□□ -1.14
DDB1-219ENST00000541513 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
DDB1-219ENST00000541513 GRXCR2A6NFK2 248 aa7.94□□□□□ -1.14
DDB1-219ENST00000541513 RFX1P22670 979 aa7.94□□□□□ -1.14
DDB1-219ENST00000541513 THOC2Q8NI27 1593 aaKnown RBP7.93□□□□□ -1.14
DDB1-219ENST00000541513 SF3A1Q15459 793 aaKnown RBP7.93□□□□□ -1.14
DDB1-219ENST00000541513 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.93□□□□□ -1.14
DDB1-219ENST00000541513 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
DDB1-219ENST00000541513 ARID4BQ4LE39 1312 aaPredicted RBP7.93□□□□□ -1.14
DDB1-219ENST00000541513 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
DDB1-219ENST00000541513 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
DDB1-219ENST00000541513 FBXO31Q5XUX0 539 aaPredicted RBP7.92□□□□□ -1.14
DDB1-219ENST00000541513 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
DDB1-219ENST00000541513 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
DDB1-219ENST00000541513 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
DDB1-219ENST00000541513 PTGER2P43116 358 aa7.91□□□□□ -1.14
DDB1-219ENST00000541513 MDM2Q00987 491 aaPredicted RBP7.91□□□□□ -1.14
DDB1-219ENST00000541513 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
DDB1-219ENST00000541513 OCEL1Q9H607 264 aa7.91□□□□□ -1.14
DDB1-219ENST00000541513 FAM217BQ9NTX9 383 aaPredicted RBP7.91□□□□□ -1.14
DDB1-219ENST00000541513 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.14
DDB1-219ENST00000541513 ANKRD62A6NC57 917 aa7.9□□□□□ -1.14
DDB1-219ENST00000541513 BCL2L13Q9BXK5 485 aa7.9□□□□□ -1.14
DDB1-219ENST00000541513 DIXDC1Q155Q3 683 aa7.89□□□□□ -1.15
DDB1-219ENST00000541513 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
DDB1-219ENST00000541513 NOM1Q5C9Z4 860 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms