RNA–Protein interactions for RNA: ENST00000541455.1

COA4-204, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

TSL 5 BASIC

Gene COA4, Length 1,038 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-204ENST00000541455 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
COA4-204ENST00000541455 BARGINQ6ZT62 677 aa16.64■□□□□ 0.25
COA4-204ENST00000541455 CDAN1Q8IWY9 1227 aa16.64■□□□□ 0.25
COA4-204ENST00000541455 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
COA4-204ENST00000541455 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
COA4-204ENST00000541455 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■□□□ 14.5
COA4-204ENST00000541455 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
COA4-204ENST00000541455 KRTAP3-3Q9BYR6 98 aa16.62■□□□□ 0.25
COA4-204ENST00000541455 KRTAP3-2Q9BYR7 98 aa16.62■□□□□ 0.25
COA4-204ENST00000541455 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
COA4-204ENST00000541455 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
COA4-204ENST00000541455 LSM11P83369 360 aaKnown RBP eCLIP16.6■□□□□ 0.25
COA4-204ENST00000541455 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
COA4-204ENST00000541455 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
COA4-204ENST00000541455 C3orf80F5H4A9 247 aa16.59■□□□□ 0.25
COA4-204ENST00000541455 VPS9D1Q9Y2B5 631 aa16.57■□□□□ 0.24
COA4-204ENST00000541455 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
COA4-204ENST00000541455 SMAPO00193 183 aa16.55■□□□□ 0.24
COA4-204ENST00000541455 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
COA4-204ENST00000541455 TTC13Q8NBP0 860 aa16.55■□□□□ 0.24
COA4-204ENST00000541455 ADGRD1Q6QNK2 874 aa16.53■□□□□ 0.24
COA4-204ENST00000541455 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
COA4-204ENST00000541455 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
COA4-204ENST00000541455 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
COA4-204ENST00000541455 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
COA4-204ENST00000541455 CHD1O14646 1710 aa16.53■□□□□ 0.24
COA4-204ENST00000541455 IRF6O14896 467 aa16.52■□□□□ 0.24
COA4-204ENST00000541455 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
COA4-204ENST00000541455 CUL7Q14999 1698 aa16.52■□□□□ 0.23
COA4-204ENST00000541455 NUDT18Q6ZVK8 323 aa16.51■□□□□ 0.23
COA4-204ENST00000541455 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
COA4-204ENST00000541455 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
COA4-204ENST00000541455 PACS2Q86VP3 889 aa16.5■□□□□ 0.23
COA4-204ENST00000541455 SLC4A5Q9BY07 1137 aa16.5■□□□□ 0.23
COA4-204ENST00000541455 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
COA4-204ENST00000541455 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
COA4-204ENST00000541455 ADAMTS12P58397 1594 aa16.5■□□□□ 0.23
COA4-204ENST00000541455 EEA1Q15075 1411 aa16.48■□□□□ 0.23
COA4-204ENST00000541455 TATDN2Q93075 761 aa16.48■□□□□ 0.23
COA4-204ENST00000541455 NLRP7Q8WX94 980 aa16.47■□□□□ 0.23
COA4-204ENST00000541455 RABGEF1Q9UJ41 708 aa16.47■□□□□ 0.23
COA4-204ENST00000541455 TK2O00142 265 aa16.46■□□□□ 0.23
COA4-204ENST00000541455 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
COA4-204ENST00000541455 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
COA4-204ENST00000541455 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
COA4-204ENST00000541455 AK7Q96M32 723 aa16.44■□□□□ 0.22
COA4-204ENST00000541455 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
COA4-204ENST00000541455 IGF1RP08069 1367 aa16.42■□□□□ 0.22
COA4-204ENST00000541455 METTL3Q86U44 580 aaKnown RBP16.42■□□□□ 0.22
COA4-204ENST00000541455 BHMG1C9JSJ3 638 aaPredicted RBP16.41■□□□□ 0.22
COA4-204ENST00000541455 HRO43593 1189 aa16.41■□□□□ 0.22
COA4-204ENST00000541455 PXYLP1Q8TE99 480 aa16.41■□□□□ 0.22
COA4-204ENST00000541455 EYA1Q99502 592 aa16.41■□□□□ 0.22
COA4-204ENST00000541455 KIF21BO75037 1637 aa16.41■□□□□ 0.22
COA4-204ENST00000541455 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
COA4-204ENST00000541455 TRIM66O15016 1216 aa16.39■□□□□ 0.21
COA4-204ENST00000541455 OATP04181 439 aa16.39■□□□□ 0.21
COA4-204ENST00000541455 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
COA4-204ENST00000541455 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
COA4-204ENST00000541455 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
COA4-204ENST00000541455 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
COA4-204ENST00000541455 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
COA4-204ENST00000541455 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
COA4-204ENST00000541455 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
COA4-204ENST00000541455 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
COA4-204ENST00000541455 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
COA4-204ENST00000541455 RCCD1A6NED2 376 aa16.35■□□□□ 0.21
COA4-204ENST00000541455 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
COA4-204ENST00000541455 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
COA4-204ENST00000541455 MDM2Q00987 491 aaPredicted RBP16.32■□□□□ 0.2
COA4-204ENST00000541455 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
COA4-204ENST00000541455 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
COA4-204ENST00000541455 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
COA4-204ENST00000541455 PDE4DQ08499 809 aa16.3■□□□□ 0.2
COA4-204ENST00000541455 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
COA4-204ENST00000541455 GOLGA8CPA6NN73 597 aa16.28■□□□□ 0.2
COA4-204ENST00000541455 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
COA4-204ENST00000541455 DNAJB2P25686 324 aa16.28■□□□□ 0.2
COA4-204ENST00000541455 ZFRQ96KR1 1074 aaKnown RBP16.28■□□□□ 0.2
COA4-204ENST00000541455 REPIN1Q9BWE0 567 aaKnown RBP16.28■□□□□ 0.2
COA4-204ENST00000541455 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
COA4-204ENST00000541455 LAPTM4BQ86VI4 370 aa16.27■□□□□ 0.2
COA4-204ENST00000541455 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
COA4-204ENST00000541455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
COA4-204ENST00000541455 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
COA4-204ENST00000541455 SWT1Q5T5J6 900 aaKnown RBP16.26■□□□□ 0.19
COA4-204ENST00000541455 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
COA4-204ENST00000541455 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
COA4-204ENST00000541455 AMHR2Q16671 573 aa16.25■□□□□ 0.19
COA4-204ENST00000541455 TMEM134Q9H6X4 195 aa16.24■□□□□ 0.19
COA4-204ENST00000541455 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
COA4-204ENST00000541455 PARP9Q8IXQ6 854 aa16.23■□□□□ 0.19
COA4-204ENST00000541455 RNF40O75150 1001 aa16.22■□□□□ 0.19
COA4-204ENST00000541455 IQGAP2Q13576 1575 aa16.21■□□□□ 0.18
COA4-204ENST00000541455 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
COA4-204ENST00000541455 SPNS2Q8IVW8 549 aa16.2■□□□□ 0.18
COA4-204ENST00000541455 WNT2BQ93097 391 aa16.2■□□□□ 0.18
COA4-204ENST00000541455 KCTD12Q96CX2 325 aaKnown RBP16.2■□□□□ 0.18
COA4-204ENST00000541455 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
COA4-204ENST00000541455 BCAMP50895 628 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms