RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 GCC2Q8IWJ2 1684 aa22.11■■□□□ 1.13
MSRB3-209ENST00000540804 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
MSRB3-209ENST00000540804 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
MSRB3-209ENST00000540804 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
MSRB3-209ENST00000540804 KCNA6P17658 529 aa22.09■■□□□ 1.13
MSRB3-209ENST00000540804 TMEM131LA2VDJ0 1609 aa22.08■■□□□ 1.13
MSRB3-209ENST00000540804 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
MSRB3-209ENST00000540804 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
MSRB3-209ENST00000540804 MYO5BQ9ULV0 1848 aa22.06■■□□□ 1.12
MSRB3-209ENST00000540804 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
MSRB3-209ENST00000540804 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
MSRB3-209ENST00000540804 PROSER2Q86WR7 435 aaPredicted RBP22.05■■□□□ 1.12
MSRB3-209ENST00000540804 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
MSRB3-209ENST00000540804 MED1Q15648 1581 aaPredicted RBP21.99■■□□□ 1.11
MSRB3-209ENST00000540804 NAIPQ13075 1403 aa21.99■■□□□ 1.11
MSRB3-209ENST00000540804 HDGFP51858 240 aaKnown RBP21.98■■□□□ 1.11
MSRB3-209ENST00000540804 NWD1Q149M9 1564 aa21.98■■□□□ 1.11
MSRB3-209ENST00000540804 SOCS7O14512 581 aa21.97■■□□□ 1.11
MSRB3-209ENST00000540804 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
MSRB3-209ENST00000540804 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
MSRB3-209ENST00000540804 TBX22Q9Y458 520 aa21.95■■□□□ 1.1
MSRB3-209ENST00000540804 NKTRP30414 1462 aaKnown RBP21.95■■□□□ 1.1
MSRB3-209ENST00000540804 FAM135BQ49AJ0 1406 aa21.91■■□□□ 1.1
MSRB3-209ENST00000540804 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
MSRB3-209ENST00000540804 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
MSRB3-209ENST00000540804 SPHKAPQ2M3C7 1700 aa21.89■■□□□ 1.1
MSRB3-209ENST00000540804 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
MSRB3-209ENST00000540804 PTPRUQ92729 1446 aa21.89■■□□□ 1.09
MSRB3-209ENST00000540804 MSH6P52701 1360 aa21.88■■□□□ 1.09
MSRB3-209ENST00000540804 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
MSRB3-209ENST00000540804 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
MSRB3-209ENST00000540804 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
MSRB3-209ENST00000540804 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
MSRB3-209ENST00000540804 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
MSRB3-209ENST00000540804 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
MSRB3-209ENST00000540804 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
MSRB3-209ENST00000540804 DIP2AQ14689 1571 aa21.83■■□□□ 1.09
MSRB3-209ENST00000540804 TRPM2O94759 1503 aa21.83■■□□□ 1.09
MSRB3-209ENST00000540804 NRXN3Q9Y4C0 1643 aa21.83■■□□□ 1.08
MSRB3-209ENST00000540804 FOXD1Q16676 465 aa21.82■■□□□ 1.08
MSRB3-209ENST00000540804 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
MSRB3-209ENST00000540804 METP08581 1390 aa21.81■■□□□ 1.08
MSRB3-209ENST00000540804 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
MSRB3-209ENST00000540804 NEXMIFQ5QGS0 1516 aa21.8■■□□□ 1.08
MSRB3-209ENST00000540804 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
MSRB3-209ENST00000540804 RGS17Q9UGC6 210 aaPredicted RBP21.78■■□□□ 1.08
MSRB3-209ENST00000540804 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
MSRB3-209ENST00000540804 C19orf44Q9H6X5 657 aa21.76■■□□□ 1.07
MSRB3-209ENST00000540804 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
MSRB3-209ENST00000540804 ATF3P18847 181 aa21.74■■□□□ 1.07
MSRB3-209ENST00000540804 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
MSRB3-209ENST00000540804 CADPS2Q86UW7 1296 aa21.72■■□□□ 1.07
MSRB3-209ENST00000540804 PHLPP1O60346 1717 aa21.71■■□□□ 1.07
MSRB3-209ENST00000540804 KIF1BO60333 1816 aa21.69■■□□□ 1.06
MSRB3-209ENST00000540804 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
MSRB3-209ENST00000540804 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
MSRB3-209ENST00000540804 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
MSRB3-209ENST00000540804 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
MSRB3-209ENST00000540804 JCADQ9P266 1359 aa21.66■■□□□ 1.06
MSRB3-209ENST00000540804 POTEAQ6S8J7 498 aa21.66■■□□□ 1.06
MSRB3-209ENST00000540804 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
MSRB3-209ENST00000540804 MST1RQ04912 1400 aa21.63■■□□□ 1.05
MSRB3-209ENST00000540804 RPGRIP1LQ68CZ1 1315 aa21.63■■□□□ 1.05
MSRB3-209ENST00000540804 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
MSRB3-209ENST00000540804 DCCP43146 1447 aa21.62■■□□□ 1.05
MSRB3-209ENST00000540804 ROBO2Q9HCK4 1378 aa21.61■■□□□ 1.05
MSRB3-209ENST00000540804 ADGRF5Q8IZF2 1346 aa21.61■■□□□ 1.05
MSRB3-209ENST00000540804 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
MSRB3-209ENST00000540804 ADGRL3Q9HAR2 1447 aa21.61■■□□□ 1.05
MSRB3-209ENST00000540804 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
MSRB3-209ENST00000540804 LRP6O75581 1613 aa21.6■■□□□ 1.05
MSRB3-209ENST00000540804 CCDC144AA2RUR9 1427 aa21.6■■□□□ 1.05
MSRB3-209ENST00000540804 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
MSRB3-209ENST00000540804 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.05
MSRB3-209ENST00000540804 PPLO60437 1756 aa21.58■■□□□ 1.04
MSRB3-209ENST00000540804 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
MSRB3-209ENST00000540804 SETD5Q9C0A6 1442 aa21.57■■□□□ 1.04
MSRB3-209ENST00000540804 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
MSRB3-209ENST00000540804 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
MSRB3-209ENST00000540804 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
MSRB3-209ENST00000540804 NUTM2AQ8IVF1 878 aaPredicted RBP21.54■■□□□ 1.04
MSRB3-209ENST00000540804 SPATA31A6Q5VVP1 1343 aa21.54■■□□□ 1.04
MSRB3-209ENST00000540804 STK26Q9P289 416 aa21.53■■□□□ 1.04
MSRB3-209ENST00000540804 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
MSRB3-209ENST00000540804 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
MSRB3-209ENST00000540804 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
MSRB3-209ENST00000540804 TMEM132EQ6IEE7 984 aa21.52■■□□□ 1.04
MSRB3-209ENST00000540804 ORAI2Q96SN7 254 aa21.52■■□□□ 1.04
MSRB3-209ENST00000540804 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
MSRB3-209ENST00000540804 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
MSRB3-209ENST00000540804 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
MSRB3-209ENST00000540804 NHSL1Q5SYE7 1610 aa21.48■■□□□ 1.03
MSRB3-209ENST00000540804 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
MSRB3-209ENST00000540804 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
MSRB3-209ENST00000540804 PLEKHH1Q9ULM0 1364 aa21.46■■□□□ 1.03
MSRB3-209ENST00000540804 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
MSRB3-209ENST00000540804 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
MSRB3-209ENST00000540804 NUTM2FA1L443 756 aa21.44■■□□□ 1.02
MSRB3-209ENST00000540804 LRPPRCP42704 1394 aaKnown RBP21.44■■□□□ 1.02
MSRB3-209ENST00000540804 PNPLA6Q8IY17 1366 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms