RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BCANQ96GW7 911 aa22.58■■□□□ 1.21
DDB1-218ENST00000540784 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
DDB1-218ENST00000540784 STRCQ7RTU9 1775 aa22.56■■□□□ 1.2
DDB1-218ENST00000540784 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
DDB1-218ENST00000540784 KIF1BO60333 1816 aa22.54■■□□□ 1.2
DDB1-218ENST00000540784 VGFO15240 615 aaPredicted RBP22.54■■□□□ 1.2
DDB1-218ENST00000540784 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
DDB1-218ENST00000540784 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
DDB1-218ENST00000540784 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
DDB1-218ENST00000540784 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
DDB1-218ENST00000540784 SIN3AQ96ST3 1273 aa22.52■■□□□ 1.2
DDB1-218ENST00000540784 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
DDB1-218ENST00000540784 MED14O60244 1454 aa22.52■■□□□ 1.2
DDB1-218ENST00000540784 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
DDB1-218ENST00000540784 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
DDB1-218ENST00000540784 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
DDB1-218ENST00000540784 NEURL4Q96JN8 1562 aa22.46■■□□□ 1.19
DDB1-218ENST00000540784 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
DDB1-218ENST00000540784 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
DDB1-218ENST00000540784 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
DDB1-218ENST00000540784 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
DDB1-218ENST00000540784 TBX22Q9Y458 520 aa22.44■■□□□ 1.18
DDB1-218ENST00000540784 NEXMIFQ5QGS0 1516 aa22.43■■□□□ 1.18
DDB1-218ENST00000540784 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
DDB1-218ENST00000540784 ADGRF5Q8IZF2 1346 aa22.41■■□□□ 1.18
DDB1-218ENST00000540784 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
DDB1-218ENST00000540784 ZNF335Q9H4Z2 1342 aaPredicted RBP22.38■■□□□ 1.17
DDB1-218ENST00000540784 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
DDB1-218ENST00000540784 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
DDB1-218ENST00000540784 ADAMTS13Q76LX8 1427 aa22.35■■□□□ 1.17
DDB1-218ENST00000540784 PPLO60437 1756 aa22.35■■□□□ 1.17
DDB1-218ENST00000540784 KCNA6P17658 529 aa22.34■■□□□ 1.17
DDB1-218ENST00000540784 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
DDB1-218ENST00000540784 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
DDB1-218ENST00000540784 MYOM2P54296 1465 aa22.3■■□□□ 1.16
DDB1-218ENST00000540784 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
DDB1-218ENST00000540784 PIK3R4Q99570 1358 aa22.29■■□□□ 1.16
DDB1-218ENST00000540784 CFAP70Q5T0N1 1121 aa22.29■■□□□ 1.16
DDB1-218ENST00000540784 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
DDB1-218ENST00000540784 METP08581 1390 aa22.28■■□□□ 1.16
DDB1-218ENST00000540784 IFT172Q9UG01 1749 aa22.28■■□□□ 1.16
DDB1-218ENST00000540784 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
DDB1-218ENST00000540784 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
DDB1-218ENST00000540784 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
DDB1-218ENST00000540784 CERKQ8TCT0 537 aa22.26■■□□□ 1.15
DDB1-218ENST00000540784 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
DDB1-218ENST00000540784 NRXN1Q9ULB1 1477 aa22.26■■□□□ 1.15
DDB1-218ENST00000540784 TMEM132EQ6IEE7 984 aa22.25■■□□□ 1.15
DDB1-218ENST00000540784 NRXN3Q9Y4C0 1643 aa22.24■■□□□ 1.15
DDB1-218ENST00000540784 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
DDB1-218ENST00000540784 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
DDB1-218ENST00000540784 STK26Q9P289 416 aa22.22■■□□□ 1.15
DDB1-218ENST00000540784 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
DDB1-218ENST00000540784 CPS1P31327 1500 aa22.21■■□□□ 1.15
DDB1-218ENST00000540784 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
DDB1-218ENST00000540784 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
DDB1-218ENST00000540784 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
DDB1-218ENST00000540784 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
DDB1-218ENST00000540784 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
DDB1-218ENST00000540784 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
DDB1-218ENST00000540784 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
DDB1-218ENST00000540784 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
DDB1-218ENST00000540784 TMEM94Q12767 1356 aa22.14■■□□□ 1.14
DDB1-218ENST00000540784 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
DDB1-218ENST00000540784 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
DDB1-218ENST00000540784 ABCC11Q96J66 1382 aa22.13■■□□□ 1.13
DDB1-218ENST00000540784 NWD1Q149M9 1564 aa22.13■■□□□ 1.13
DDB1-218ENST00000540784 YTHDC2Q9H6S0 1430 aaKnown RBP22.13■■□□□ 1.13
DDB1-218ENST00000540784 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
DDB1-218ENST00000540784 SIRT1Q96EB6 747 aa22.12■■□□□ 1.13
DDB1-218ENST00000540784 TRAK1Q9UPV9 953 aa22.12■■□□□ 1.13
DDB1-218ENST00000540784 LAMC1P11047 1609 aa22.11■■□□□ 1.13
DDB1-218ENST00000540784 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
DDB1-218ENST00000540784 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
DDB1-218ENST00000540784 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.13
DDB1-218ENST00000540784 C19orf44Q9H6X5 657 aa22.08■■□□□ 1.13
DDB1-218ENST00000540784 POGKQ9P215 609 aa22.08■■□□□ 1.13
DDB1-218ENST00000540784 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.12
DDB1-218ENST00000540784 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
DDB1-218ENST00000540784 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
DDB1-218ENST00000540784 TOM1O60784 492 aa22.06■■□□□ 1.12
DDB1-218ENST00000540784 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
DDB1-218ENST00000540784 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
DDB1-218ENST00000540784 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
DDB1-218ENST00000540784 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
DDB1-218ENST00000540784 TECPR2O15040 1411 aa22.05■■□□□ 1.12
DDB1-218ENST00000540784 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
DDB1-218ENST00000540784 MSH6P52701 1360 aa22.04■■□□□ 1.12
DDB1-218ENST00000540784 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
DDB1-218ENST00000540784 ATF3P18847 181 aa22.03■■□□□ 1.12
DDB1-218ENST00000540784 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
DDB1-218ENST00000540784 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
DDB1-218ENST00000540784 FAM135BQ49AJ0 1406 aa22.02■■□□□ 1.12
DDB1-218ENST00000540784 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
DDB1-218ENST00000540784 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
DDB1-218ENST00000540784 TRPM1Q7Z4N2 1603 aa21.98■■□□□ 1.11
DDB1-218ENST00000540784 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
DDB1-218ENST00000540784 DLC1Q96QB1 1528 aa21.97■■□□□ 1.11
DDB1-218ENST00000540784 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
DDB1-218ENST00000540784 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms