RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CPS1P31327 1500 aa20.28■□□□□ 0.84
CYB561A3-216ENST00000540755 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
CYB561A3-216ENST00000540755 THEMISQ8N1K5 641 aaPredicted RBP20.28■□□□□ 0.84
CYB561A3-216ENST00000540755 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
CYB561A3-216ENST00000540755 SYNMO15061 1565 aa20.27■□□□□ 0.83
CYB561A3-216ENST00000540755 ANKLE2Q86XL3 938 aa20.26■□□□□ 0.83
CYB561A3-216ENST00000540755 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
CYB561A3-216ENST00000540755 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
CYB561A3-216ENST00000540755 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
CYB561A3-216ENST00000540755 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
CYB561A3-216ENST00000540755 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
CYB561A3-216ENST00000540755 ARHGAP23Q9P227 1491 aa20.22■□□□□ 0.83
CYB561A3-216ENST00000540755 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
CYB561A3-216ENST00000540755 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
CYB561A3-216ENST00000540755 STRCP1A6NGW2 1772 aa20.22■□□□□ 0.83
CYB561A3-216ENST00000540755 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
CYB561A3-216ENST00000540755 SLIT1O75093 1534 aa20.21■□□□□ 0.83
CYB561A3-216ENST00000540755 TRPM1Q7Z4N2 1603 aa20.2■□□□□ 0.82
CYB561A3-216ENST00000540755 DISP3Q9P2K9 1392 aa20.2■□□□□ 0.82
CYB561A3-216ENST00000540755 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
CYB561A3-216ENST00000540755 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
CYB561A3-216ENST00000540755 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
CYB561A3-216ENST00000540755 MYOM2P54296 1465 aa20.16■□□□□ 0.82
CYB561A3-216ENST00000540755 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
CYB561A3-216ENST00000540755 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
CYB561A3-216ENST00000540755 PPLO60437 1756 aa20.15■□□□□ 0.82
CYB561A3-216ENST00000540755 LAMC1P11047 1609 aa20.15■□□□□ 0.82
CYB561A3-216ENST00000540755 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
CYB561A3-216ENST00000540755 LRRC7Q96NW7 1537 aa20.13■□□□□ 0.81
CYB561A3-216ENST00000540755 LTKP29376 864 aa20.13■□□□□ 0.81
CYB561A3-216ENST00000540755 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
CYB561A3-216ENST00000540755 ILDR2Q71H61 639 aa20.13■□□□□ 0.81
CYB561A3-216ENST00000540755 KIAA1210Q9ULL0 1709 aa20.13■□□□□ 0.81
CYB561A3-216ENST00000540755 TMEM131LA2VDJ0 1609 aa20.12■□□□□ 0.81
CYB561A3-216ENST00000540755 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
CYB561A3-216ENST00000540755 GPRASP1Q5JY77 1395 aa20.1■□□□□ 0.81
CYB561A3-216ENST00000540755 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
CYB561A3-216ENST00000540755 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
CYB561A3-216ENST00000540755 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
CYB561A3-216ENST00000540755 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
CYB561A3-216ENST00000540755 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
CYB561A3-216ENST00000540755 IDI1Q13907 227 aa20.09■□□□□ 0.81
CYB561A3-216ENST00000540755 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
CYB561A3-216ENST00000540755 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
CYB561A3-216ENST00000540755 TXNDC2Q86VQ3 553 aa20.07■□□□□ 0.8
CYB561A3-216ENST00000540755 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
CYB561A3-216ENST00000540755 TOM1O60784 492 aa20.06■□□□□ 0.8
CYB561A3-216ENST00000540755 HSPA1LP34931 641 aa20.06■□□□□ 0.8
CYB561A3-216ENST00000540755 USP47Q96K76 1375 aa20.06■□□□□ 0.8
CYB561A3-216ENST00000540755 PIP4K2BP78356 416 aa20.05■□□□□ 0.8
CYB561A3-216ENST00000540755 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
CYB561A3-216ENST00000540755 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
CYB561A3-216ENST00000540755 XIRP1Q702N8 1843 aaKnown RBP20.05■□□□□ 0.8
CYB561A3-216ENST00000540755 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
CYB561A3-216ENST00000540755 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
CYB561A3-216ENST00000540755 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
CYB561A3-216ENST00000540755 EID1Q9Y6B2 187 aa20.01■□□□□ 0.79
CYB561A3-216ENST00000540755 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
CYB561A3-216ENST00000540755 NBPF1Q3BBV0 1214 aa20■□□□□ 0.79
CYB561A3-216ENST00000540755 PIK3C2GO75747 1445 aa20■□□□□ 0.79
CYB561A3-216ENST00000540755 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
CYB561A3-216ENST00000540755 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
CYB561A3-216ENST00000540755 NWD1Q149M9 1564 aa19.97■□□□□ 0.79
CYB561A3-216ENST00000540755 VGFO15240 615 aaPredicted RBP19.97■□□□□ 0.79
CYB561A3-216ENST00000540755 SOCS7O14512 581 aa19.95■□□□□ 0.78
CYB561A3-216ENST00000540755 SLC26A8Q96RN1 970 aa19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 CCDC7Q96M83 1385 aa19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
CYB561A3-216ENST00000540755 NKTRP30414 1462 aaKnown RBP19.91■□□□□ 0.78
CYB561A3-216ENST00000540755 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
CYB561A3-216ENST00000540755 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
CYB561A3-216ENST00000540755 RIMS2Q9UQ26 1411 aa19.9■□□□□ 0.78
CYB561A3-216ENST00000540755 KCNA6P17658 529 aa19.9■□□□□ 0.78
CYB561A3-216ENST00000540755 PLEKHG1Q9ULL1 1385 aa19.89■□□□□ 0.78
CYB561A3-216ENST00000540755 C11orf95C9JLR9 678 aaPredicted RBP19.88■□□□□ 0.77
CYB561A3-216ENST00000540755 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
CYB561A3-216ENST00000540755 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
CYB561A3-216ENST00000540755 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
CYB561A3-216ENST00000540755 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
CYB561A3-216ENST00000540755 CHD2O14647 1828 aaKnown RBP19.85■□□□□ 0.77
CYB561A3-216ENST00000540755 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
CYB561A3-216ENST00000540755 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
CYB561A3-216ENST00000540755 FAM135BQ49AJ0 1406 aa19.84■□□□□ 0.77
CYB561A3-216ENST00000540755 ADAMTS13Q76LX8 1427 aa19.84■□□□□ 0.77
CYB561A3-216ENST00000540755 RBM33Q96EV2 1170 aaKnown RBP19.84■□□□□ 0.77
CYB561A3-216ENST00000540755 SETD1AO15047 1707 aaKnown RBP19.83■□□□□ 0.77
CYB561A3-216ENST00000540755 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.76
CYB561A3-216ENST00000540755 TESK2Q96S53 571 aa19.82■□□□□ 0.76
CYB561A3-216ENST00000540755 ROBO1Q9Y6N7 1651 aa19.82■□□□□ 0.76
CYB561A3-216ENST00000540755 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
CYB561A3-216ENST00000540755 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
CYB561A3-216ENST00000540755 NRXN3Q9Y4C0 1643 aa19.81■□□□□ 0.76
CYB561A3-216ENST00000540755 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
CYB561A3-216ENST00000540755 ARHGEF28Q8N1W1 1705 aaKnown RBP19.81■□□□□ 0.76
CYB561A3-216ENST00000540755 MIER1Q8N108 512 aa19.78■□□□□ 0.76
CYB561A3-216ENST00000540755 BCANQ96GW7 911 aa19.78■□□□□ 0.76
CYB561A3-216ENST00000540755 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms