RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CHGAP10645 457 aaKnown RBP15.6■□□□□ 0.09
CDCA3-208ENST00000540683 PLEKHG1Q9ULL1 1385 aa15.6■□□□□ 0.09
CDCA3-208ENST00000540683 LRRC7Q96NW7 1537 aa15.59■□□□□ 0.09
CDCA3-208ENST00000540683 TMEM131LA2VDJ0 1609 aa15.59■□□□□ 0.09
CDCA3-208ENST00000540683 KCNA6P17658 529 aa15.59■□□□□ 0.09
CDCA3-208ENST00000540683 HFM1A2PYH4 1435 aa15.59■□□□□ 0.09
CDCA3-208ENST00000540683 RIMS2Q9UQ26 1411 aa15.59■□□□□ 0.09
CDCA3-208ENST00000540683 NKTRP30414 1462 aaKnown RBP15.58■□□□□ 0.08
CDCA3-208ENST00000540683 PIP4K2BP78356 416 aa15.57■□□□□ 0.08
CDCA3-208ENST00000540683 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
CDCA3-208ENST00000540683 NAIPQ13075 1403 aa15.57■□□□□ 0.08
CDCA3-208ENST00000540683 SPHKAPQ2M3C7 1700 aa15.57■□□□□ 0.08
CDCA3-208ENST00000540683 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
CDCA3-208ENST00000540683 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
CDCA3-208ENST00000540683 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
CDCA3-208ENST00000540683 PROSER2Q86WR7 435 aaPredicted RBP15.54■□□□□ 0.08
CDCA3-208ENST00000540683 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
CDCA3-208ENST00000540683 SLC26A8Q96RN1 970 aa15.54■□□□□ 0.08
CDCA3-208ENST00000540683 STRCP1A6NGW2 1772 aa15.54■□□□□ 0.08
CDCA3-208ENST00000540683 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
CDCA3-208ENST00000540683 MYO5BQ9ULV0 1848 aa15.53■□□□□ 0.08
CDCA3-208ENST00000540683 NCOA3Q9Y6Q9 1424 aa15.52■□□□□ 0.08
CDCA3-208ENST00000540683 NWD1Q149M9 1564 aa15.52■□□□□ 0.07
CDCA3-208ENST00000540683 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
CDCA3-208ENST00000540683 TRPM2O94759 1503 aa15.51■□□□□ 0.07
CDCA3-208ENST00000540683 MSH6P52701 1360 aa15.5■□□□□ 0.07
CDCA3-208ENST00000540683 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
CDCA3-208ENST00000540683 KIF1BO60333 1816 aa15.5■□□□□ 0.07
CDCA3-208ENST00000540683 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
CDCA3-208ENST00000540683 CHD2O14647 1828 aaKnown RBP15.48■□□□□ 0.07
CDCA3-208ENST00000540683 HSPA1LP34931 641 aa15.48■□□□□ 0.07
CDCA3-208ENST00000540683 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
CDCA3-208ENST00000540683 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
CDCA3-208ENST00000540683 FAM135BQ49AJ0 1406 aa15.46■□□□□ 0.07
CDCA3-208ENST00000540683 C14orf37Q86TY3 774 aa15.45■□□□□ 0.06
CDCA3-208ENST00000540683 XIRP1Q702N8 1843 aaKnown RBP15.44■□□□□ 0.06
CDCA3-208ENST00000540683 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
CDCA3-208ENST00000540683 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
CDCA3-208ENST00000540683 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
CDCA3-208ENST00000540683 ATF3P18847 181 aa15.42■□□□□ 0.06
CDCA3-208ENST00000540683 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
CDCA3-208ENST00000540683 CLTCL1P53675 1640 aa15.42■□□□□ 0.06
CDCA3-208ENST00000540683 ALKQ9UM73 1620 aa15.41■□□□□ 0.06
CDCA3-208ENST00000540683 CCDC144AA2RUR9 1427 aa15.41■□□□□ 0.06
CDCA3-208ENST00000540683 NUTM2DQ5VT03 806 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-208ENST00000540683 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
CDCA3-208ENST00000540683 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
CDCA3-208ENST00000540683 DCCP43146 1447 aa15.38■□□□□ 0.05
CDCA3-208ENST00000540683 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
CDCA3-208ENST00000540683 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
CDCA3-208ENST00000540683 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
CDCA3-208ENST00000540683 ROBO1Q9Y6N7 1651 aa15.36■□□□□ 0.05
CDCA3-208ENST00000540683 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
CDCA3-208ENST00000540683 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
CDCA3-208ENST00000540683 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
CDCA3-208ENST00000540683 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.04
CDCA3-208ENST00000540683 HRCP23327 699 aa15.32■□□□□ 0.04
CDCA3-208ENST00000540683 SOCS7O14512 581 aa15.31■□□□□ 0.04
CDCA3-208ENST00000540683 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
CDCA3-208ENST00000540683 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-208ENST00000540683 PPLO60437 1756 aa15.31■□□□□ 0.04
CDCA3-208ENST00000540683 METP08581 1390 aa15.3■□□□□ 0.04
CDCA3-208ENST00000540683 PTCH1Q13635 1447 aa15.3■□□□□ 0.04
CDCA3-208ENST00000540683 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
CDCA3-208ENST00000540683 JCADQ9P266 1359 aa15.29■□□□□ 0.04
CDCA3-208ENST00000540683 PRAG1Q86YV5 1406 aa15.28■□□□□ 0.04
CDCA3-208ENST00000540683 PTPRUQ92729 1446 aa15.28■□□□□ 0.04
CDCA3-208ENST00000540683 ADGRL3Q9HAR2 1447 aa15.28■□□□□ 0.04
CDCA3-208ENST00000540683 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
CDCA3-208ENST00000540683 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
CDCA3-208ENST00000540683 SPATA31A6Q5VVP1 1343 aa15.26■□□□□ 0.03
CDCA3-208ENST00000540683 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
CDCA3-208ENST00000540683 AHDC1Q5TGY3 1603 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-208ENST00000540683 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
CDCA3-208ENST00000540683 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
CDCA3-208ENST00000540683 LAMC1P11047 1609 aa15.22■□□□□ 0.03
CDCA3-208ENST00000540683 SETD1AO15047 1707 aaKnown RBP15.22■□□□□ 0.03
CDCA3-208ENST00000540683 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
CDCA3-208ENST00000540683 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
CDCA3-208ENST00000540683 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
CDCA3-208ENST00000540683 MST1RQ04912 1400 aa15.2■□□□□ 0.02
CDCA3-208ENST00000540683 COL16A1Q07092 1604 aaPredicted RBP15.2■□□□□ 0.02
CDCA3-208ENST00000540683 MYOM2P54296 1465 aa15.2■□□□□ 0.02
CDCA3-208ENST00000540683 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
CDCA3-208ENST00000540683 ASXL1Q8IXJ9 1541 aa15.19■□□□□ 0.02
CDCA3-208ENST00000540683 MEX3CQ5U5Q3 659 aaKnown RBP15.19■□□□□ 0.02
CDCA3-208ENST00000540683 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
CDCA3-208ENST00000540683 ABCC11Q96J66 1382 aa15.19■□□□□ 0.02
CDCA3-208ENST00000540683 SHPRHQ149N8 1683 aa15.19■□□□□ 0.02
CDCA3-208ENST00000540683 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
CDCA3-208ENST00000540683 TECPR2O15040 1411 aa15.18■□□□□ 0.02
CDCA3-208ENST00000540683 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
CDCA3-208ENST00000540683 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
CDCA3-208ENST00000540683 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
CDCA3-208ENST00000540683 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
CDCA3-208ENST00000540683 ZNF772Q68DY9 489 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-208ENST00000540683 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
CDCA3-208ENST00000540683 KNDC1Q76NI1 1749 aa15.16■□□□□ 0.02
CDCA3-208ENST00000540683 NHSL1Q5SYE7 1610 aa15.16■□□□□ 0.02
CDCA3-208ENST00000540683 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms