RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 BCANQ96GW7 911 aa26.6■■□□□ 1.85
FERMT3-203ENST00000540554 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
FERMT3-203ENST00000540554 SLC52A1Q9NWF4 448 aa26.6■■□□□ 1.85
FERMT3-203ENST00000540554 ROBO1Q9Y6N7 1651 aa26.59■■□□□ 1.85
FERMT3-203ENST00000540554 TMEM94Q12767 1356 aa26.57■■□□□ 1.84
FERMT3-203ENST00000540554 NKTRP30414 1462 aaKnown RBP26.56■■□□□ 1.84
FERMT3-203ENST00000540554 KCNA6P17658 529 aa26.55■■□□□ 1.84
FERMT3-203ENST00000540554 ZFYVE9O95405 1425 aa26.54■■□□□ 1.84
FERMT3-203ENST00000540554 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
FERMT3-203ENST00000540554 PROSER2Q86WR7 435 aaPredicted RBP26.53■■□□□ 1.84
FERMT3-203ENST00000540554 ROCK1Q13464 1354 aa26.53■■□□□ 1.84
FERMT3-203ENST00000540554 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
FERMT3-203ENST00000540554 SPHKAPQ2M3C7 1700 aa26.52■■□□□ 1.84
FERMT3-203ENST00000540554 CHGAP10645 457 aaKnown RBP26.5■■□□□ 1.83
FERMT3-203ENST00000540554 ITGAEP38570 1179 aa26.5■■□□□ 1.83
FERMT3-203ENST00000540554 PLEKHG1Q9ULL1 1385 aa26.49■■□□□ 1.83
FERMT3-203ENST00000540554 RBM33Q96EV2 1170 aaKnown RBP26.49■■□□□ 1.83
FERMT3-203ENST00000540554 PHLPP1O60346 1717 aa26.48■■□□□ 1.83
FERMT3-203ENST00000540554 FAM135BQ49AJ0 1406 aa26.47■■□□□ 1.83
FERMT3-203ENST00000540554 HDGFP51858 240 aaKnown RBP26.46■■□□□ 1.83
FERMT3-203ENST00000540554 PPARGC1BQ86YN6 1023 aaKnown RBP26.46■■□□□ 1.83
FERMT3-203ENST00000540554 DIP2AQ14689 1571 aa26.45■■□□□ 1.82
FERMT3-203ENST00000540554 MSH6P52701 1360 aa26.45■■□□□ 1.82
FERMT3-203ENST00000540554 NUP155O75694 1391 aa26.43■■□□□ 1.82
FERMT3-203ENST00000540554 NUTM2DQ5VT03 806 aaPredicted RBP26.4■■□□□ 1.82
FERMT3-203ENST00000540554 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.4■■□□□ 1.82
FERMT3-203ENST00000540554 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.81
FERMT3-203ENST00000540554 KIF1BO60333 1816 aa26.38■■□□□ 1.81
FERMT3-203ENST00000540554 TRPM2O94759 1503 aa26.37■■□□□ 1.81
FERMT3-203ENST00000540554 ADAMTS13Q76LX8 1427 aa26.34■■□□□ 1.81
FERMT3-203ENST00000540554 C14orf37Q86TY3 774 aa26.33■■□□□ 1.81
FERMT3-203ENST00000540554 TBX22Q9Y458 520 aa26.33■■□□□ 1.81
FERMT3-203ENST00000540554 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
FERMT3-203ENST00000540554 CLTCL1P53675 1640 aa26.3■■□□□ 1.8
FERMT3-203ENST00000540554 COL16A1Q07092 1604 aaPredicted RBP26.29■■□□□ 1.8
FERMT3-203ENST00000540554 SLAIN2Q9P270 581 aa26.29■■□□□ 1.8
FERMT3-203ENST00000540554 XRN1Q8IZH2 1706 aaKnown RBP26.28■■□□□ 1.8
FERMT3-203ENST00000540554 PIK3R4Q99570 1358 aa26.28■■□□□ 1.8
FERMT3-203ENST00000540554 NCOA3Q9Y6Q9 1424 aa26.27■■□□□ 1.8
FERMT3-203ENST00000540554 SETBP1Q9Y6X0 1596 aa26.26■■□□□ 1.79
FERMT3-203ENST00000540554 RGS17Q9UGC6 210 aaPredicted RBP26.24■■□□□ 1.79
FERMT3-203ENST00000540554 ZNF326Q5BKZ1 582 aaKnown RBP26.23■■□□□ 1.79
FERMT3-203ENST00000540554 RRBP1Q9P2E9 1410 aaKnown RBP26.22■■□□□ 1.79
FERMT3-203ENST00000540554 SHPRHQ149N8 1683 aa26.22■■□□□ 1.79
FERMT3-203ENST00000540554 PTPRUQ92729 1446 aa26.21■■□□□ 1.79
FERMT3-203ENST00000540554 AHDC1Q5TGY3 1603 aaPredicted RBP26.21■■□□□ 1.79
FERMT3-203ENST00000540554 JCADQ9P266 1359 aa26.2■■□□□ 1.79
FERMT3-203ENST00000540554 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
FERMT3-203ENST00000540554 SETD1AO15047 1707 aaKnown RBP26.2■■□□□ 1.79
FERMT3-203ENST00000540554 ATF3P18847 181 aa26.19■■□□□ 1.78
FERMT3-203ENST00000540554 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
FERMT3-203ENST00000540554 CADPS2Q86UW7 1296 aa26.18■■□□□ 1.78
FERMT3-203ENST00000540554 NALCNQ8IZF0 1738 aa26.17■■□□□ 1.78
FERMT3-203ENST00000540554 NAIPQ13075 1403 aa26.17■■□□□ 1.78
FERMT3-203ENST00000540554 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
FERMT3-203ENST00000540554 POTEAQ6S8J7 498 aa26.13■■□□□ 1.77
FERMT3-203ENST00000540554 NHSL1Q5SYE7 1610 aa26.13■■□□□ 1.77
FERMT3-203ENST00000540554 PPLO60437 1756 aa26.12■■□□□ 1.77
FERMT3-203ENST00000540554 DCCP43146 1447 aa26.11■■□□□ 1.77
FERMT3-203ENST00000540554 LRP6O75581 1613 aa26.1■■□□□ 1.77
FERMT3-203ENST00000540554 ASXL1Q8IXJ9 1541 aa26.09■■□□□ 1.77
FERMT3-203ENST00000540554 TRIM52Q96A61 297 aa26.09■■□□□ 1.77
FERMT3-203ENST00000540554 METP08581 1390 aa26.08■■□□□ 1.77
FERMT3-203ENST00000540554 MEX3CQ5U5Q3 659 aaKnown RBP26.07■■□□□ 1.76
FERMT3-203ENST00000540554 HFM1A2PYH4 1435 aa26.06■■□□□ 1.76
FERMT3-203ENST00000540554 SPATA31A6Q5VVP1 1343 aa26.06■■□□□ 1.76
FERMT3-203ENST00000540554 BRINP3Q76B58 766 aa26.04■■□□□ 1.76
FERMT3-203ENST00000540554 MST1RQ04912 1400 aa26.04■■□□□ 1.76
FERMT3-203ENST00000540554 ADGRL3Q9HAR2 1447 aa26.04■■□□□ 1.76
FERMT3-203ENST00000540554 SLC4A1APQ9BWU0 796 aaKnown RBP25.98■■□□□ 1.75
FERMT3-203ENST00000540554 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
FERMT3-203ENST00000540554 NUTM2BA6NNL0 878 aaPredicted RBP25.95■■□□□ 1.74
FERMT3-203ENST00000540554 NUTM2EB1AL46 878 aaPredicted RBP25.95■■□□□ 1.74
FERMT3-203ENST00000540554 NUTM2AQ8IVF1 878 aaPredicted RBP25.95■■□□□ 1.74
FERMT3-203ENST00000540554 PTCH1Q13635 1447 aa25.95■■□□□ 1.74
FERMT3-203ENST00000540554 VGFO15240 615 aaPredicted RBP25.94■■□□□ 1.74
FERMT3-203ENST00000540554 SETD5Q9C0A6 1442 aa25.92■■□□□ 1.74
FERMT3-203ENST00000540554 ZNF772Q68DY9 489 aaPredicted RBP25.92■■□□□ 1.74
FERMT3-203ENST00000540554 LAMC1P11047 1609 aa25.9■■□□□ 1.74
FERMT3-203ENST00000540554 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.74
FERMT3-203ENST00000540554 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
FERMT3-203ENST00000540554 ROBO2Q9HCK4 1378 aa25.88■■□□□ 1.73
FERMT3-203ENST00000540554 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
FERMT3-203ENST00000540554 FOXD1Q16676 465 aa25.86■■□□□ 1.73
FERMT3-203ENST00000540554 LRRC59Q96AG4 307 aaKnown RBP25.86■■□□□ 1.73
FERMT3-203ENST00000540554 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
FERMT3-203ENST00000540554 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
FERMT3-203ENST00000540554 PNPLA6Q8IY17 1366 aa25.84■■□□□ 1.73
FERMT3-203ENST00000540554 PRAG1Q86YV5 1406 aa25.84■■□□□ 1.73
FERMT3-203ENST00000540554 AFF2P51816 1311 aa25.83■■□□□ 1.73
FERMT3-203ENST00000540554 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
FERMT3-203ENST00000540554 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
FERMT3-203ENST00000540554 RXRBP28702 533 aa25.79■■□□□ 1.72
FERMT3-203ENST00000540554 C8orf37Q96NL8 207 aa25.78■■□□□ 1.72
FERMT3-203ENST00000540554 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
FERMT3-203ENST00000540554 ORAI2Q96SN7 254 aa25.76■■□□□ 1.71
FERMT3-203ENST00000540554 CDK12Q9NYV4 1490 aaPredicted RBP25.76■■□□□ 1.71
FERMT3-203ENST00000540554 COL22A1Q8NFW1 1626 aaPredicted RBP25.76■■□□□ 1.71
FERMT3-203ENST00000540554 RGPD8O14715 1765 aaPredicted RBP25.75■■□□□ 1.71
FERMT3-203ENST00000540554 SPATA31E1Q6ZUB1 1445 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms