RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
TSFM-207ENST00000540550 NOS1P29475 1434 aa20.36■□□□□ 0.85
TSFM-207ENST00000540550 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
TSFM-207ENST00000540550 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
TSFM-207ENST00000540550 PIK3C2BO00750 1634 aa20.35■□□□□ 0.85
TSFM-207ENST00000540550 REREQ9P2R6 1566 aa20.35■□□□□ 0.85
TSFM-207ENST00000540550 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
TSFM-207ENST00000540550 SYNMO15061 1565 aa20.34■□□□□ 0.85
TSFM-207ENST00000540550 NRXN1Q9ULB1 1477 aa20.34■□□□□ 0.85
TSFM-207ENST00000540550 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.84
TSFM-207ENST00000540550 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
TSFM-207ENST00000540550 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
TSFM-207ENST00000540550 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
TSFM-207ENST00000540550 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
TSFM-207ENST00000540550 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
TSFM-207ENST00000540550 AGLP35573 1532 aa20.3■□□□□ 0.84
TSFM-207ENST00000540550 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
TSFM-207ENST00000540550 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
TSFM-207ENST00000540550 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
TSFM-207ENST00000540550 RALBP1Q15311 655 aa20.27■□□□□ 0.84
TSFM-207ENST00000540550 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
TSFM-207ENST00000540550 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
TSFM-207ENST00000540550 PIK3C2GO75747 1445 aa20.24■□□□□ 0.83
TSFM-207ENST00000540550 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
TSFM-207ENST00000540550 MYO3AQ8NEV4 1616 aa20.23■□□□□ 0.83
TSFM-207ENST00000540550 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
TSFM-207ENST00000540550 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
TSFM-207ENST00000540550 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
TSFM-207ENST00000540550 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
TSFM-207ENST00000540550 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
TSFM-207ENST00000540550 MYO5BQ9ULV0 1848 aa20.22■□□□□ 0.83
TSFM-207ENST00000540550 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
TSFM-207ENST00000540550 PANK3Q9H999 370 aa20.21■□□□□ 0.83
TSFM-207ENST00000540550 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
TSFM-207ENST00000540550 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
TSFM-207ENST00000540550 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
TSFM-207ENST00000540550 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
TSFM-207ENST00000540550 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
TSFM-207ENST00000540550 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
TSFM-207ENST00000540550 MYOM1P52179 1685 aa20.18■□□□□ 0.82
TSFM-207ENST00000540550 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
TSFM-207ENST00000540550 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
TSFM-207ENST00000540550 IDI1Q13907 227 aa20.18■□□□□ 0.82
TSFM-207ENST00000540550 ADGRB1O14514 1584 aa20.17■□□□□ 0.82
TSFM-207ENST00000540550 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
TSFM-207ENST00000540550 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
TSFM-207ENST00000540550 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
TSFM-207ENST00000540550 NEFLP07196 543 aa20.14■□□□□ 0.81
TSFM-207ENST00000540550 CENPJQ9HC77 1338 aaPredicted RBP20.13■□□□□ 0.81
TSFM-207ENST00000540550 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
TSFM-207ENST00000540550 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
TSFM-207ENST00000540550 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
TSFM-207ENST00000540550 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
TSFM-207ENST00000540550 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
TSFM-207ENST00000540550 FBXO31Q5XUX0 539 aaPredicted RBP20.12■□□□□ 0.81
TSFM-207ENST00000540550 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
TSFM-207ENST00000540550 MLECQ14165 292 aa20.11■□□□□ 0.81
TSFM-207ENST00000540550 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
TSFM-207ENST00000540550 SPATA31D1Q6ZQQ2 1576 aa20.11■□□□□ 0.81
TSFM-207ENST00000540550 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
TSFM-207ENST00000540550 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
TSFM-207ENST00000540550 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.81
TSFM-207ENST00000540550 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
TSFM-207ENST00000540550 STAG3Q9UJ98 1225 aa20.08■□□□□ 0.81
TSFM-207ENST00000540550 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
TSFM-207ENST00000540550 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
TSFM-207ENST00000540550 FKBP8Q14318 412 aa20.06■□□□□ 0.8
TSFM-207ENST00000540550 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
TSFM-207ENST00000540550 NPC1L1Q9UHC9 1359 aa20.01■□□□□ 0.79
TSFM-207ENST00000540550 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
TSFM-207ENST00000540550 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
TSFM-207ENST00000540550 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
TSFM-207ENST00000540550 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
TSFM-207ENST00000540550 EVC2Q86UK5 1308 aa19.97■□□□□ 0.79
TSFM-207ENST00000540550 RIMS2Q9UQ26 1411 aa19.96■□□□□ 0.79
TSFM-207ENST00000540550 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
TSFM-207ENST00000540550 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
TSFM-207ENST00000540550 STK26Q9P289 416 aa19.95■□□□□ 0.78
TSFM-207ENST00000540550 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
TSFM-207ENST00000540550 TULP4Q9NRJ4 1543 aa19.95■□□□□ 0.78
TSFM-207ENST00000540550 INSRP06213 1382 aa19.94■□□□□ 0.78
TSFM-207ENST00000540550 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
TSFM-207ENST00000540550 BCANQ96GW7 911 aa19.94■□□□□ 0.78
TSFM-207ENST00000540550 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
TSFM-207ENST00000540550 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
TSFM-207ENST00000540550 TNRQ92752 1358 aa19.92■□□□□ 0.78
TSFM-207ENST00000540550 PTPRMP28827 1452 aa19.92■□□□□ 0.78
TSFM-207ENST00000540550 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
TSFM-207ENST00000540550 USP32Q8NFA0 1604 aa19.9■□□□□ 0.78
TSFM-207ENST00000540550 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
TSFM-207ENST00000540550 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
TSFM-207ENST00000540550 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
TSFM-207ENST00000540550 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
TSFM-207ENST00000540550 NSD3Q9BZ95 1437 aa19.89■□□□□ 0.78
TSFM-207ENST00000540550 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.77
TSFM-207ENST00000540550 POGKQ9P215 609 aa19.89■□□□□ 0.77
TSFM-207ENST00000540550 SLC12A5Q9H2X9 1139 aa19.88■□□□□ 0.77
TSFM-207ENST00000540550 UBR1Q8IWV7 1749 aa19.87■□□□□ 0.77
TSFM-207ENST00000540550 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
TSFM-207ENST00000540550 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms