RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 NKTRP30414 1462 aaKnown RBP29.55■■■□□ 2.32
SOD2-212ENST00000540491 PLEKHG1Q9ULL1 1385 aa29.54■■■□□ 2.32
SOD2-212ENST00000540491 ZFYVE9O95405 1425 aa29.52■■■□□ 2.32
SOD2-212ENST00000540491 PPP1R15AO75807 674 aaPredicted RBP29.51■■■□□ 2.31
SOD2-212ENST00000540491 UNC13BO14795 1591 aa29.51■■■□□ 2.31
SOD2-212ENST00000540491 TBX22Q9Y458 520 aa29.49■■■□□ 2.31
SOD2-212ENST00000540491 XIRP1Q702N8 1843 aaKnown RBP29.49■■■□□ 2.31
SOD2-212ENST00000540491 RIMS2Q9UQ26 1411 aa29.48■■■□□ 2.31
SOD2-212ENST00000540491 GCC2Q8IWJ2 1684 aa29.48■■■□□ 2.31
SOD2-212ENST00000540491 NWD1Q149M9 1564 aa29.47■■■□□ 2.31
SOD2-212ENST00000540491 MSH6P52701 1360 aa29.46■■■□□ 2.31
SOD2-212ENST00000540491 SENP3Q9H4L4 574 aaPredicted RBP29.45■■■□□ 2.31
SOD2-212ENST00000540491 TMEM131LA2VDJ0 1609 aa29.44■■■□□ 2.3
SOD2-212ENST00000540491 NCOA3Q9Y6Q9 1424 aa29.44■■■□□ 2.3
SOD2-212ENST00000540491 NUP155O75694 1391 aa29.43■■■□□ 2.3
SOD2-212ENST00000540491 CHGAP10645 457 aaKnown RBP29.42■■■□□ 2.3
SOD2-212ENST00000540491 PIK3R4Q99570 1358 aa29.4■■■□□ 2.3
SOD2-212ENST00000540491 IQGAP3Q86VI3 1631 aa29.4■■■□□ 2.3
SOD2-212ENST00000540491 SLAIN2Q9P270 581 aa29.38■■■□□ 2.29
SOD2-212ENST00000540491 RBM33Q96EV2 1170 aaKnown RBP29.36■■■□□ 2.29
SOD2-212ENST00000540491 E9PCH4 1651 aa29.36■■■□□ 2.29
SOD2-212ENST00000540491 ITGAEP38570 1179 aa29.34■■■□□ 2.29
SOD2-212ENST00000540491 DIP2AQ14689 1571 aa29.33■■■□□ 2.29
SOD2-212ENST00000540491 CHD2O14647 1828 aaKnown RBP29.33■■■□□ 2.29
SOD2-212ENST00000540491 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
SOD2-212ENST00000540491 ADAMTS13Q76LX8 1427 aa29.31■■■□□ 2.28
SOD2-212ENST00000540491 ROBO1Q9Y6N7 1651 aa29.31■■■□□ 2.28
SOD2-212ENST00000540491 CADPS2Q86UW7 1296 aa29.29■■■□□ 2.28
SOD2-212ENST00000540491 C19orf44Q9H6X5 657 aa29.28■■■□□ 2.28
SOD2-212ENST00000540491 RGS17Q9UGC6 210 aaPredicted RBP29.27■■■□□ 2.28
SOD2-212ENST00000540491 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
SOD2-212ENST00000540491 NUTM2DQ5VT03 806 aaPredicted RBP29.24■■■□□ 2.27
SOD2-212ENST00000540491 JCADQ9P266 1359 aa29.24■■■□□ 2.27
SOD2-212ENST00000540491 TRPM2O94759 1503 aa29.22■■■□□ 2.27
SOD2-212ENST00000540491 ATF3P18847 181 aa29.22■■■□□ 2.27
SOD2-212ENST00000540491 AMOTL2Q9Y2J4 779 aa29.22■■■□□ 2.27
SOD2-212ENST00000540491 RRBP1Q9P2E9 1410 aaKnown RBP29.2■■■□□ 2.26
SOD2-212ENST00000540491 PPARGC1BQ86YN6 1023 aaKnown RBP29.19■■■□□ 2.26
SOD2-212ENST00000540491 ZNF326Q5BKZ1 582 aaKnown RBP29.17■■■□□ 2.26
SOD2-212ENST00000540491 DCCP43146 1447 aa29.14■■■□□ 2.26
SOD2-212ENST00000540491 PHLPP1O60346 1717 aa29.14■■■□□ 2.25
SOD2-212ENST00000540491 SETBP1Q9Y6X0 1596 aa29.13■■■□□ 2.25
SOD2-212ENST00000540491 SPHKAPQ2M3C7 1700 aa29.13■■■□□ 2.25
SOD2-212ENST00000540491 SPATA31A6Q5VVP1 1343 aa29.13■■■□□ 2.25
SOD2-212ENST00000540491 PTPRUQ92729 1446 aa29.11■■■□□ 2.25
SOD2-212ENST00000540491 NAIPQ13075 1403 aa29.11■■■□□ 2.25
SOD2-212ENST00000540491 POTEAQ6S8J7 498 aa29.1■■■□□ 2.25
SOD2-212ENST00000540491 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.25
SOD2-212ENST00000540491 COL16A1Q07092 1604 aaPredicted RBP29.06■■■□□ 2.24
SOD2-212ENST00000540491 AHDC1Q5TGY3 1603 aaPredicted RBP29.06■■■□□ 2.24
SOD2-212ENST00000540491 VGFO15240 615 aaPredicted RBP29.04■■■□□ 2.24
SOD2-212ENST00000540491 BRINP3Q76B58 766 aa29.04■■■□□ 2.24
SOD2-212ENST00000540491 NRXN3Q9Y4C0 1643 aa29.03■■■□□ 2.24
SOD2-212ENST00000540491 HFM1A2PYH4 1435 aa29.03■■■□□ 2.24
SOD2-212ENST00000540491 METP08581 1390 aa29.02■■■□□ 2.24
SOD2-212ENST00000540491 XRN1Q8IZH2 1706 aaKnown RBP29.02■■■□□ 2.24
SOD2-212ENST00000540491 RPGRIP1LQ68CZ1 1315 aa29.01■■■□□ 2.23
SOD2-212ENST00000540491 ZNF772Q68DY9 489 aaPredicted RBP28.99■■■□□ 2.23
SOD2-212ENST00000540491 TRIM52Q96A61 297 aa28.99■■■□□ 2.23
SOD2-212ENST00000540491 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
SOD2-212ENST00000540491 CLTCL1P53675 1640 aa28.98■■■□□ 2.23
SOD2-212ENST00000540491 MEX3CQ5U5Q3 659 aaKnown RBP28.97■■■□□ 2.23
SOD2-212ENST00000540491 SLC4A1APQ9BWU0 796 aaKnown RBP28.96■■■□□ 2.23
SOD2-212ENST00000540491 ADGRL3Q9HAR2 1447 aa28.95■■■□□ 2.23
SOD2-212ENST00000540491 MST1RQ04912 1400 aa28.94■■■□□ 2.22
SOD2-212ENST00000540491 KIF1BO60333 1816 aa28.94■■■□□ 2.22
SOD2-212ENST00000540491 LRRC59Q96AG4 307 aaKnown RBP28.93■■■□□ 2.22
SOD2-212ENST00000540491 SETD5Q9C0A6 1442 aa28.93■■■□□ 2.22
SOD2-212ENST00000540491 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
SOD2-212ENST00000540491 ASXL1Q8IXJ9 1541 aa28.92■■■□□ 2.22
SOD2-212ENST00000540491 LRP6O75581 1613 aa28.9■■■□□ 2.22
SOD2-212ENST00000540491 PTCH1Q13635 1447 aa28.89■■■□□ 2.22
SOD2-212ENST00000540491 PRAG1Q86YV5 1406 aa28.87■■■□□ 2.21
SOD2-212ENST00000540491 ACIN1Q9UKV3 1341 aaKnown RBP28.86■■■□□ 2.21
SOD2-212ENST00000540491 NHSL1Q5SYE7 1610 aa28.8■■■□□ 2.2
SOD2-212ENST00000540491 NUTM2BA6NNL0 878 aaPredicted RBP28.8■■■□□ 2.2
SOD2-212ENST00000540491 NUTM2EB1AL46 878 aaPredicted RBP28.8■■■□□ 2.2
SOD2-212ENST00000540491 NUTM2AQ8IVF1 878 aaPredicted RBP28.8■■■□□ 2.2
SOD2-212ENST00000540491 C1orf167Q5SNV9 1468 aa28.79■■■□□ 2.2
SOD2-212ENST00000540491 ROBO2Q9HCK4 1378 aa28.79■■■□□ 2.2
SOD2-212ENST00000540491 RXRBP28702 533 aa28.79■■■□□ 2.2
SOD2-212ENST00000540491 NALCNQ8IZF0 1738 aa28.76■■■□□ 2.19
SOD2-212ENST00000540491 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
SOD2-212ENST00000540491 PNPLA6Q8IY17 1366 aa28.75■■■□□ 2.19
SOD2-212ENST00000540491 CDK12Q9NYV4 1490 aaPredicted RBP28.74■■■□□ 2.19
SOD2-212ENST00000540491 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
SOD2-212ENST00000540491 AFF2P51816 1311 aa28.73■■■□□ 2.19
SOD2-212ENST00000540491 SETD1AO15047 1707 aaKnown RBP28.73■■■□□ 2.19
SOD2-212ENST00000540491 SOS2Q07890 1332 aaPredicted RBP28.72■■■□□ 2.19
SOD2-212ENST00000540491 MPHOSPH9Q99550 1183 aa28.72■■■□□ 2.19
SOD2-212ENST00000540491 PPLO60437 1756 aa28.7■■■□□ 2.19
SOD2-212ENST00000540491 LAMC1P11047 1609 aa28.7■■■□□ 2.19
SOD2-212ENST00000540491 DDX17Q92841 729 aaKnown RBP28.7■■■□□ 2.18
SOD2-212ENST00000540491 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
SOD2-212ENST00000540491 FOXD1Q16676 465 aa28.67■■■□□ 2.18
SOD2-212ENST00000540491 C8orf37Q96NL8 207 aa28.66■■■□□ 2.18
SOD2-212ENST00000540491 SPATA31E1Q6ZUB1 1445 aa28.66■■■□□ 2.18
SOD2-212ENST00000540491 ADGRF5Q8IZF2 1346 aa28.66■■■□□ 2.18
SOD2-212ENST00000540491 RGL3Q3MIN7 710 aa28.65■■■□□ 2.18
SOD2-212ENST00000540491 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms