RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-215ENST00000540317 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
CYB561A3-215ENST00000540317 CPS1P31327 1500 aa17.15■□□□□ 0.34
CYB561A3-215ENST00000540317 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-215ENST00000540317 TOM1O60784 492 aa17.14■□□□□ 0.33
CYB561A3-215ENST00000540317 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
CYB561A3-215ENST00000540317 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
CYB561A3-215ENST00000540317 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
CYB561A3-215ENST00000540317 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
CYB561A3-215ENST00000540317 IQGAP3Q86VI3 1631 aa17.12■□□□□ 0.33
CYB561A3-215ENST00000540317 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
CYB561A3-215ENST00000540317 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
CYB561A3-215ENST00000540317 ADGRB3O60242 1522 aa17.11■□□□□ 0.33
CYB561A3-215ENST00000540317 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
CYB561A3-215ENST00000540317 E9PCH4 1651 aa17.09■□□□□ 0.33
CYB561A3-215ENST00000540317 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
CYB561A3-215ENST00000540317 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
CYB561A3-215ENST00000540317 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
CYB561A3-215ENST00000540317 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
CYB561A3-215ENST00000540317 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
CYB561A3-215ENST00000540317 KCNA6P17658 529 aa17.06■□□□□ 0.32
CYB561A3-215ENST00000540317 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
CYB561A3-215ENST00000540317 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
CYB561A3-215ENST00000540317 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
CYB561A3-215ENST00000540317 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
CYB561A3-215ENST00000540317 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
CYB561A3-215ENST00000540317 TMEM131LA2VDJ0 1609 aa17.04■□□□□ 0.32
CYB561A3-215ENST00000540317 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
CYB561A3-215ENST00000540317 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.32
CYB561A3-215ENST00000540317 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.31
CYB561A3-215ENST00000540317 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
CYB561A3-215ENST00000540317 HSPA1LP34931 641 aa17■□□□□ 0.31
CYB561A3-215ENST00000540317 TBX22Q9Y458 520 aa17■□□□□ 0.31
CYB561A3-215ENST00000540317 TMEM94Q12767 1356 aa16.99■□□□□ 0.31
CYB561A3-215ENST00000540317 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
CYB561A3-215ENST00000540317 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
CYB561A3-215ENST00000540317 FOXD1Q16676 465 aa16.96■□□□□ 0.31
CYB561A3-215ENST00000540317 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
CYB561A3-215ENST00000540317 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
CYB561A3-215ENST00000540317 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
CYB561A3-215ENST00000540317 TRPM2O94759 1503 aa16.92■□□□□ 0.3
CYB561A3-215ENST00000540317 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
CYB561A3-215ENST00000540317 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
CYB561A3-215ENST00000540317 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
CYB561A3-215ENST00000540317 MSH6P52701 1360 aa16.9■□□□□ 0.3
CYB561A3-215ENST00000540317 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
CYB561A3-215ENST00000540317 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.3
CYB561A3-215ENST00000540317 PIK3R4Q99570 1358 aa16.89■□□□□ 0.29
CYB561A3-215ENST00000540317 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-215ENST00000540317 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
CYB561A3-215ENST00000540317 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
CYB561A3-215ENST00000540317 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-215ENST00000540317 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
CYB561A3-215ENST00000540317 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
CYB561A3-215ENST00000540317 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
CYB561A3-215ENST00000540317 KIF1BO60333 1816 aa16.85■□□□□ 0.29
CYB561A3-215ENST00000540317 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
CYB561A3-215ENST00000540317 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
CYB561A3-215ENST00000540317 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
CYB561A3-215ENST00000540317 ATF3P18847 181 aa16.84■□□□□ 0.29
CYB561A3-215ENST00000540317 MIER1Q8N108 512 aa16.84■□□□□ 0.29
CYB561A3-215ENST00000540317 METP08581 1390 aa16.84■□□□□ 0.29
CYB561A3-215ENST00000540317 PTPRUQ92729 1446 aa16.83■□□□□ 0.29
CYB561A3-215ENST00000540317 NCOA3Q9Y6Q9 1424 aa16.83■□□□□ 0.28
CYB561A3-215ENST00000540317 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
CYB561A3-215ENST00000540317 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
CYB561A3-215ENST00000540317 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
CYB561A3-215ENST00000540317 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
CYB561A3-215ENST00000540317 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
CYB561A3-215ENST00000540317 NRXN3Q9Y4C0 1643 aa16.79■□□□□ 0.28
CYB561A3-215ENST00000540317 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.28
CYB561A3-215ENST00000540317 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.27
CYB561A3-215ENST00000540317 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
CYB561A3-215ENST00000540317 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
CYB561A3-215ENST00000540317 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
CYB561A3-215ENST00000540317 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
CYB561A3-215ENST00000540317 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
CYB561A3-215ENST00000540317 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
CYB561A3-215ENST00000540317 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
CYB561A3-215ENST00000540317 STK26Q9P289 416 aa16.71■□□□□ 0.27
CYB561A3-215ENST00000540317 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
CYB561A3-215ENST00000540317 PPLO60437 1756 aa16.7■□□□□ 0.26
CYB561A3-215ENST00000540317 ROBO2Q9HCK4 1378 aa16.69■□□□□ 0.26
CYB561A3-215ENST00000540317 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
CYB561A3-215ENST00000540317 DCCP43146 1447 aa16.69■□□□□ 0.26
CYB561A3-215ENST00000540317 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
CYB561A3-215ENST00000540317 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
CYB561A3-215ENST00000540317 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
CYB561A3-215ENST00000540317 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
CYB561A3-215ENST00000540317 SOCS7O14512 581 aa16.67■□□□□ 0.26
CYB561A3-215ENST00000540317 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
CYB561A3-215ENST00000540317 JCADQ9P266 1359 aa16.66■□□□□ 0.26
CYB561A3-215ENST00000540317 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CYB561A3-215ENST00000540317 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
CYB561A3-215ENST00000540317 MST1RQ04912 1400 aa16.64■□□□□ 0.26
CYB561A3-215ENST00000540317 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
CYB561A3-215ENST00000540317 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
CYB561A3-215ENST00000540317 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
CYB561A3-215ENST00000540317 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
CYB561A3-215ENST00000540317 SETD1AO15047 1707 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms