RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 PANK3Q9H999 370 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
GPD2-213ENST00000540309 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
GPD2-213ENST00000540309 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
GPD2-213ENST00000540309 CLCN1P35523 988 aa13.29□□□□□ -0.28
GPD2-213ENST00000540309 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
GPD2-213ENST00000540309 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
GPD2-213ENST00000540309 MAGI1Q96QZ7 1491 aaPredicted RBP13.28□□□□□ -0.28
GPD2-213ENST00000540309 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 E9PSI1 815 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 ABCA8O94911 1581 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
GPD2-213ENST00000540309 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.28
GPD2-213ENST00000540309 CARMIL2Q6F5E8 1435 aa13.27□□□□□ -0.29
GPD2-213ENST00000540309 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
GPD2-213ENST00000540309 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
GPD2-213ENST00000540309 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
GPD2-213ENST00000540309 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
GPD2-213ENST00000540309 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
GPD2-213ENST00000540309 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
GPD2-213ENST00000540309 SCAPERQ9BY12 1400 aa13.25□□□□□ -0.29
GPD2-213ENST00000540309 MAGI2Q86UL8 1455 aa13.25□□□□□ -0.29
GPD2-213ENST00000540309 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
GPD2-213ENST00000540309 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
GPD2-213ENST00000540309 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
GPD2-213ENST00000540309 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
GPD2-213ENST00000540309 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 POGKQ9P215 609 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
GPD2-213ENST00000540309 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
GPD2-213ENST00000540309 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
GPD2-213ENST00000540309 SKAP1Q86WV1 359 aa13.22□□□□□ -0.29
GPD2-213ENST00000540309 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
GPD2-213ENST00000540309 RGS3P49796 1198 aa13.21□□□□□ -0.29
GPD2-213ENST00000540309 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
GPD2-213ENST00000540309 RRAGDQ9NQL2 400 aaPredicted RBP13.21□□□□□ -0.29
GPD2-213ENST00000540309 MRE11P49959 708 aa13.21□□□□□ -0.29
GPD2-213ENST00000540309 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
GPD2-213ENST00000540309 DUOX2Q9NRD8 1548 aa13.2□□□□□ -0.3
GPD2-213ENST00000540309 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
GPD2-213ENST00000540309 PTMSP20962 102 aa13.2□□□□□ -0.3
GPD2-213ENST00000540309 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
GPD2-213ENST00000540309 MYOM1P52179 1685 aa13.19□□□□□ -0.3
GPD2-213ENST00000540309 CDC42BPBQ9Y5S2 1711 aa13.19□□□□□ -0.3
GPD2-213ENST00000540309 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
GPD2-213ENST00000540309 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
GPD2-213ENST00000540309 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
GPD2-213ENST00000540309 ATP10BO94823 1461 aa13.18□□□□□ -0.3
GPD2-213ENST00000540309 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
GPD2-213ENST00000540309 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
GPD2-213ENST00000540309 MCM4P33991 863 aa13.18□□□□□ -0.3
GPD2-213ENST00000540309 KANK1Q14678 1352 aa13.18□□□□□ -0.3
GPD2-213ENST00000540309 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
GPD2-213ENST00000540309 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
GPD2-213ENST00000540309 IGHDP01880 384 aa13.17□□□□□ -0.3
GPD2-213ENST00000540309 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
GPD2-213ENST00000540309 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
GPD2-213ENST00000540309 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
GPD2-213ENST00000540309 HSP90AA1P07900 732 aaKnown RBP13.16□□□□□ -0.3
GPD2-213ENST00000540309 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
GPD2-213ENST00000540309 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
GPD2-213ENST00000540309 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
GPD2-213ENST00000540309 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
GPD2-213ENST00000540309 CEP152O94986 1710 aa13.14□□□□□ -0.31
GPD2-213ENST00000540309 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
GPD2-213ENST00000540309 TPM2P07951 284 aa13.12□□□□□ -0.31
GPD2-213ENST00000540309 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
GPD2-213ENST00000540309 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
GPD2-213ENST00000540309 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
GPD2-213ENST00000540309 SEC24BO95487 1268 aa13.12□□□□□ -0.31
GPD2-213ENST00000540309 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
GPD2-213ENST00000540309 TERF1P54274 439 aa13.12□□□□□ -0.31
GPD2-213ENST00000540309 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
GPD2-213ENST00000540309 BCAR3O75815 825 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
GPD2-213ENST00000540309 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 TRPM2O94759 1503 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 APAF1O14727 1248 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 TRAK2O60296 914 aa13.11□□□□□ -0.31
GPD2-213ENST00000540309 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
GPD2-213ENST00000540309 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
GPD2-213ENST00000540309 SNX21Q969T3 373 aa13.09□□□□□ -0.31
GPD2-213ENST00000540309 ESPNB1AK53 854 aa13.09□□□□□ -0.31
GPD2-213ENST00000540309 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
GPD2-213ENST00000540309 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
GPD2-213ENST00000540309 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
GPD2-213ENST00000540309 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
GPD2-213ENST00000540309 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms