RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
LMO3-221ENST00000539534 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
LMO3-221ENST00000539534 SLIT1O75093 1534 aa17.87■□□□□ 0.45
LMO3-221ENST00000539534 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
LMO3-221ENST00000539534 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
LMO3-221ENST00000539534 LTKP29376 864 aa17.85■□□□□ 0.45
LMO3-221ENST00000539534 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMO3-221ENST00000539534 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
LMO3-221ENST00000539534 MYOM2P54296 1465 aa17.84■□□□□ 0.45
LMO3-221ENST00000539534 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
LMO3-221ENST00000539534 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
LMO3-221ENST00000539534 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
LMO3-221ENST00000539534 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
LMO3-221ENST00000539534 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
LMO3-221ENST00000539534 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
LMO3-221ENST00000539534 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
LMO3-221ENST00000539534 HSPA2P54652 639 aa17.81■□□□□ 0.44
LMO3-221ENST00000539534 EID1Q9Y6B2 187 aa17.81■□□□□ 0.44
LMO3-221ENST00000539534 PPLO60437 1756 aa17.81■□□□□ 0.44
LMO3-221ENST00000539534 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
LMO3-221ENST00000539534 ADGRF5Q8IZF2 1346 aa17.79■□□□□ 0.44
LMO3-221ENST00000539534 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
LMO3-221ENST00000539534 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
LMO3-221ENST00000539534 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
LMO3-221ENST00000539534 MYO5BQ9ULV0 1848 aa17.77■□□□□ 0.44
LMO3-221ENST00000539534 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
LMO3-221ENST00000539534 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.43
LMO3-221ENST00000539534 MED14O60244 1454 aa17.76■□□□□ 0.43
LMO3-221ENST00000539534 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
LMO3-221ENST00000539534 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
LMO3-221ENST00000539534 LAMC1P11047 1609 aa17.75■□□□□ 0.43
LMO3-221ENST00000539534 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
LMO3-221ENST00000539534 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
LMO3-221ENST00000539534 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
LMO3-221ENST00000539534 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
LMO3-221ENST00000539534 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
LMO3-221ENST00000539534 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
LMO3-221ENST00000539534 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
LMO3-221ENST00000539534 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
LMO3-221ENST00000539534 SETBP1Q9Y6X0 1596 aa17.7■□□□□ 0.42
LMO3-221ENST00000539534 CFAP70Q5T0N1 1121 aa17.68■□□□□ 0.42
LMO3-221ENST00000539534 GPRASP1Q5JY77 1395 aa17.67■□□□□ 0.42
LMO3-221ENST00000539534 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
LMO3-221ENST00000539534 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
LMO3-221ENST00000539534 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
LMO3-221ENST00000539534 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
LMO3-221ENST00000539534 STRCQ7RTU9 1775 aa17.64■□□□□ 0.41
LMO3-221ENST00000539534 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
LMO3-221ENST00000539534 BCANQ96GW7 911 aa17.64■□□□□ 0.41
LMO3-221ENST00000539534 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
LMO3-221ENST00000539534 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
LMO3-221ENST00000539534 METP08581 1390 aa17.63■□□□□ 0.41
LMO3-221ENST00000539534 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
LMO3-221ENST00000539534 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
LMO3-221ENST00000539534 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
LMO3-221ENST00000539534 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
LMO3-221ENST00000539534 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
LMO3-221ENST00000539534 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
LMO3-221ENST00000539534 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
LMO3-221ENST00000539534 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
LMO3-221ENST00000539534 SIRT1Q96EB6 747 aa17.58■□□□□ 0.4
LMO3-221ENST00000539534 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
LMO3-221ENST00000539534 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
LMO3-221ENST00000539534 KCNA6P17658 529 aa17.57■□□□□ 0.4
LMO3-221ENST00000539534 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
LMO3-221ENST00000539534 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
LMO3-221ENST00000539534 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
LMO3-221ENST00000539534 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
LMO3-221ENST00000539534 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
LMO3-221ENST00000539534 TECPR2O15040 1411 aa17.55■□□□□ 0.4
LMO3-221ENST00000539534 EIF4G2P78344 907 aaKnown RBP eCLIP17.54■□□□□ 0.4
LMO3-221ENST00000539534 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.39
LMO3-221ENST00000539534 USP47Q96K76 1375 aa17.52■□□□□ 0.39
LMO3-221ENST00000539534 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
LMO3-221ENST00000539534 STK26Q9P289 416 aa17.51■□□□□ 0.39
LMO3-221ENST00000539534 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
LMO3-221ENST00000539534 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
LMO3-221ENST00000539534 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
LMO3-221ENST00000539534 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
LMO3-221ENST00000539534 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
LMO3-221ENST00000539534 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
LMO3-221ENST00000539534 NWD1Q149M9 1564 aa17.48■□□□□ 0.39
LMO3-221ENST00000539534 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
LMO3-221ENST00000539534 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
LMO3-221ENST00000539534 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
LMO3-221ENST00000539534 CPS1P31327 1500 aa17.46■□□□□ 0.39
LMO3-221ENST00000539534 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
LMO3-221ENST00000539534 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
LMO3-221ENST00000539534 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
LMO3-221ENST00000539534 NCOA3Q9Y6Q9 1424 aa17.44■□□□□ 0.38
LMO3-221ENST00000539534 PLEKHH1Q9ULM0 1364 aa17.43■□□□□ 0.38
LMO3-221ENST00000539534 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
LMO3-221ENST00000539534 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
LMO3-221ENST00000539534 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
LMO3-221ENST00000539534 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
LMO3-221ENST00000539534 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
LMO3-221ENST00000539534 TESK2Q96S53 571 aa17.42■□□□□ 0.38
LMO3-221ENST00000539534 POGKQ9P215 609 aa17.42■□□□□ 0.38
LMO3-221ENST00000539534 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
LMO3-221ENST00000539534 STRCP1A6NGW2 1772 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms