RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
LDHC-206ENST00000539369 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
LDHC-206ENST00000539369 UNC13AQ9UPW8 1703 aa10.27□□□□□ -0.77
LDHC-206ENST00000539369 E2F4Q16254 413 aa10.26□□□□□ -0.77
LDHC-206ENST00000539369 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
LDHC-206ENST00000539369 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
LDHC-206ENST00000539369 DGAT1O75907 488 aa10.25□□□□□ -0.77
LDHC-206ENST00000539369 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
LDHC-206ENST00000539369 EYA1Q99502 592 aa10.25□□□□□ -0.77
LDHC-206ENST00000539369 TLL1O43897 1013 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PRR20EP86478 221 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PRR20CP86479 221 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PRR20DP86480 221 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PRR20BP86481 221 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PRR20AP86496 221 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
LDHC-206ENST00000539369 LIAT1Q6ZQX7 453 aa10.23□□□□□ -0.77
LDHC-206ENST00000539369 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
LDHC-206ENST00000539369 PCDHB3Q9Y5E6 796 aa10.23□□□□□ -0.77
LDHC-206ENST00000539369 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
LDHC-206ENST00000539369 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
LDHC-206ENST00000539369 GDF9O60383 454 aa10.2□□□□□ -0.78
LDHC-206ENST00000539369 ANKLE1Q8NAG6 615 aa10.19□□□□□ -0.78
LDHC-206ENST00000539369 ZNF697Q5TEC3 545 aa10.18□□□□□ -0.78
LDHC-206ENST00000539369 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
LDHC-206ENST00000539369 FAM187AA6NFU0 413 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 S1PR4O95977 384 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 PRR14Q9BWN1 585 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
LDHC-206ENST00000539369 CECR2Q9BXF3 1484 aa10.16□□□□□ -0.78
LDHC-206ENST00000539369 PLA2G2CQ5R387 149 aa10.15□□□□□ -0.78
LDHC-206ENST00000539369 TREML4Q6UXN2 200 aa10.15□□□□□ -0.78
LDHC-206ENST00000539369 AAASQ9NRG9 546 aa10.14□□□□□ -0.79
LDHC-206ENST00000539369 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
LDHC-206ENST00000539369 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
LDHC-206ENST00000539369 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
LDHC-206ENST00000539369 TMEM134Q9H6X4 195 aa10.1□□□□□ -0.79
LDHC-206ENST00000539369 DNAJB2P25686 324 aa10.09□□□□□ -0.79
LDHC-206ENST00000539369 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
LDHC-206ENST00000539369 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
LDHC-206ENST00000539369 ADH1BP00325 375 aa10.08□□□□□ -0.8
LDHC-206ENST00000539369 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
LDHC-206ENST00000539369 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
LDHC-206ENST00000539369 CFHP08603 1231 aa10.07□□□□□ -0.8
LDHC-206ENST00000539369 SLC10A3P09131 477 aa10.06□□□□□ -0.8
LDHC-206ENST00000539369 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
LDHC-206ENST00000539369 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
LDHC-206ENST00000539369 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
LDHC-206ENST00000539369 PTGDRQ13258 359 aa10.04□□□□□ -0.8
LDHC-206ENST00000539369 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
LDHC-206ENST00000539369 SLC6A16Q9GZN6 736 aa10.04□□□□□ -0.8
LDHC-206ENST00000539369 EIF4G1Q04637 1599 aaKnown RBP10.04□□□□□ -0.8
LDHC-206ENST00000539369 RCCD1A6NED2 376 aa10.03□□□□□ -0.8
LDHC-206ENST00000539369 CRIPAKQ8N1N5 446 aa10.03□□□□□ -0.8
LDHC-206ENST00000539369 FOXC1Q12948 553 aa10.02□□□□□ -0.81
LDHC-206ENST00000539369 RBM46Q8TBY0 533 aaKnown RBP10.02□□□□□ -0.81
LDHC-206ENST00000539369 NR1I2O75469 434 aa10.01□□□□□ -0.81
LDHC-206ENST00000539369 SCUBE3Q8IX30 993 aa10□□□□□ -0.81
LDHC-206ENST00000539369 GMPR2Q9P2T1 348 aaKnown RBP10□□□□□ -0.81
LDHC-206ENST00000539369 AVPP01185 164 aa9.99□□□□□ -0.81
LDHC-206ENST00000539369 LMOD2Q6P5Q4 547 aa9.99□□□□□ -0.81
LDHC-206ENST00000539369 TOR4AQ9NXH8 423 aa9.99□□□□□ -0.81
LDHC-206ENST00000539369 WFS1O76024 890 aa9.98□□□□□ -0.81
LDHC-206ENST00000539369 NFX1Q12986 1120 aaKnown RBP9.97□□□□□ -0.81
LDHC-206ENST00000539369 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
LDHC-206ENST00000539369 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
LDHC-206ENST00000539369 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
LDHC-206ENST00000539369 SCRIBQ14160 1630 aa9.96□□□□□ -0.82
LDHC-206ENST00000539369 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
LDHC-206ENST00000539369 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
LDHC-206ENST00000539369 SPSB2Q99619 263 aa9.94□□□□□ -0.82
LDHC-206ENST00000539369 DCAF1Q9Y4B6 1507 aa9.93□□□□□ -0.82
LDHC-206ENST00000539369 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
LDHC-206ENST00000539369 AXIN1O15169 862 aa9.93□□□□□ -0.82
LDHC-206ENST00000539369 RPIAP49247 311 aa9.93□□□□□ -0.82
LDHC-206ENST00000539369 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
LDHC-206ENST00000539369 WIPF1O43516 503 aa9.92□□□□□ -0.82
LDHC-206ENST00000539369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
LDHC-206ENST00000539369 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
LDHC-206ENST00000539369 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
LDHC-206ENST00000539369 PXYLP1Q8TE99 480 aa9.9□□□□□ -0.82
LDHC-206ENST00000539369 FCF1Q9Y324 198 aaKnown RBP9.9□□□□□ -0.82
LDHC-206ENST00000539369 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
LDHC-206ENST00000539369 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
LDHC-206ENST00000539369 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
LDHC-206ENST00000539369 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
LDHC-206ENST00000539369 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
LDHC-206ENST00000539369 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
LDHC-206ENST00000539369 CD2BP2O95400 341 aaKnown RBP9.86□□□□□ -0.83
LDHC-206ENST00000539369 MORN1Q5T089 497 aa9.86□□□□□ -0.83
LDHC-206ENST00000539369 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
LDHC-206ENST00000539369 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
LDHC-206ENST00000539369 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
LDHC-206ENST00000539369 FCHSD2O94868 740 aa9.82□□□□□ -0.84
LDHC-206ENST00000539369 SMPD1P17405 629 aa9.82□□□□□ -0.84
LDHC-206ENST00000539369 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
LDHC-206ENST00000539369 ATP13A2Q9NQ11 1180 aa9.82□□□□□ -0.84
LDHC-206ENST00000539369 OATP04181 439 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms