RNA–Protein interactions for RNA: ENST00000539365.1

PTPN6-213, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-213ENST00000539365 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
PTPN6-213ENST00000539365 E9PCH4 1651 aa20.66■□□□□ 0.9
PTPN6-213ENST00000539365 LRRC7Q96NW7 1537 aa20.65■□□□□ 0.9
PTPN6-213ENST00000539365 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
PTPN6-213ENST00000539365 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
PTPN6-213ENST00000539365 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
PTPN6-213ENST00000539365 PROSER2Q86WR7 435 aaPredicted RBP20.63■□□□□ 0.89
PTPN6-213ENST00000539365 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
PTPN6-213ENST00000539365 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
PTPN6-213ENST00000539365 TMEM131LA2VDJ0 1609 aa20.61■□□□□ 0.89
PTPN6-213ENST00000539365 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
PTPN6-213ENST00000539365 NUTM2DQ5VT03 806 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-213ENST00000539365 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-213ENST00000539365 HSPA1LP34931 641 aa20.57■□□□□ 0.88
PTPN6-213ENST00000539365 TMEM94Q12767 1356 aa20.57■□□□□ 0.88
PTPN6-213ENST00000539365 STRCP1A6NGW2 1772 aa20.56■□□□□ 0.88
PTPN6-213ENST00000539365 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
PTPN6-213ENST00000539365 DISP3Q9P2K9 1392 aa20.53■□□□□ 0.88
PTPN6-213ENST00000539365 NKTRP30414 1462 aaKnown RBP20.51■□□□□ 0.87
PTPN6-213ENST00000539365 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
PTPN6-213ENST00000539365 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
PTPN6-213ENST00000539365 SPHKAPQ2M3C7 1700 aa20.5■□□□□ 0.87
PTPN6-213ENST00000539365 VGFO15240 615 aaPredicted RBP20.49■□□□□ 0.87
PTPN6-213ENST00000539365 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
PTPN6-213ENST00000539365 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
PTPN6-213ENST00000539365 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
PTPN6-213ENST00000539365 TRPM2O94759 1503 aa20.48■□□□□ 0.87
PTPN6-213ENST00000539365 MSH6P52701 1360 aa20.48■□□□□ 0.87
PTPN6-213ENST00000539365 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
PTPN6-213ENST00000539365 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
PTPN6-213ENST00000539365 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
PTPN6-213ENST00000539365 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
PTPN6-213ENST00000539365 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
PTPN6-213ENST00000539365 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
PTPN6-213ENST00000539365 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
PTPN6-213ENST00000539365 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
PTPN6-213ENST00000539365 FOXD1Q16676 465 aa20.44■□□□□ 0.86
PTPN6-213ENST00000539365 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
PTPN6-213ENST00000539365 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
PTPN6-213ENST00000539365 CLTCL1P53675 1640 aa20.42■□□□□ 0.86
PTPN6-213ENST00000539365 CHD2O14647 1828 aaKnown RBP20.41■□□□□ 0.86
PTPN6-213ENST00000539365 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
PTPN6-213ENST00000539365 ATF3P18847 181 aa20.4■□□□□ 0.86
PTPN6-213ENST00000539365 CADPS2Q86UW7 1296 aa20.4■□□□□ 0.86
PTPN6-213ENST00000539365 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
PTPN6-213ENST00000539365 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
PTPN6-213ENST00000539365 KIF1BO60333 1816 aa20.37■□□□□ 0.85
PTPN6-213ENST00000539365 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
PTPN6-213ENST00000539365 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
PTPN6-213ENST00000539365 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
PTPN6-213ENST00000539365 METP08581 1390 aa20.35■□□□□ 0.85
PTPN6-213ENST00000539365 HRCP23327 699 aa20.35■□□□□ 0.85
PTPN6-213ENST00000539365 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
PTPN6-213ENST00000539365 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
PTPN6-213ENST00000539365 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PTPN6-213ENST00000539365 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
PTPN6-213ENST00000539365 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
PTPN6-213ENST00000539365 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
PTPN6-213ENST00000539365 DCCP43146 1447 aa20.26■□□□□ 0.83
PTPN6-213ENST00000539365 ADGRF5Q8IZF2 1346 aa20.26■□□□□ 0.83
PTPN6-213ENST00000539365 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
PTPN6-213ENST00000539365 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
PTPN6-213ENST00000539365 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
PTPN6-213ENST00000539365 SOCS7O14512 581 aa20.22■□□□□ 0.83
PTPN6-213ENST00000539365 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
PTPN6-213ENST00000539365 BRINP3Q76B58 766 aa20.21■□□□□ 0.83
PTPN6-213ENST00000539365 JCADQ9P266 1359 aa20.21■□□□□ 0.83
PTPN6-213ENST00000539365 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
PTPN6-213ENST00000539365 ADGRL3Q9HAR2 1447 aa20.2■□□□□ 0.82
PTPN6-213ENST00000539365 ROBO2Q9HCK4 1378 aa20.19■□□□□ 0.82
PTPN6-213ENST00000539365 PPLO60437 1756 aa20.18■□□□□ 0.82
PTPN6-213ENST00000539365 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
PTPN6-213ENST00000539365 STK26Q9P289 416 aa20.18■□□□□ 0.82
PTPN6-213ENST00000539365 STAC3Q96MF2 364 aa20.17■□□□□ 0.82
PTPN6-213ENST00000539365 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
PTPN6-213ENST00000539365 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
PTPN6-213ENST00000539365 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
PTPN6-213ENST00000539365 MST1RQ04912 1400 aa20.15■□□□□ 0.82
PTPN6-213ENST00000539365 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
PTPN6-213ENST00000539365 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
PTPN6-213ENST00000539365 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
PTPN6-213ENST00000539365 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
PTPN6-213ENST00000539365 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
PTPN6-213ENST00000539365 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
PTPN6-213ENST00000539365 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
PTPN6-213ENST00000539365 CFAP70Q5T0N1 1121 aa20.11■□□□□ 0.81
PTPN6-213ENST00000539365 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
PTPN6-213ENST00000539365 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
PTPN6-213ENST00000539365 DCAF11Q8TEB1 546 aa20.1■□□□□ 0.81
PTPN6-213ENST00000539365 KDM2AQ9Y2K7 1162 aa20.1■□□□□ 0.81
PTPN6-213ENST00000539365 AHDC1Q5TGY3 1603 aaPredicted RBP20.09■□□□□ 0.81
PTPN6-213ENST00000539365 MYOM2P54296 1465 aa20.09■□□□□ 0.81
PTPN6-213ENST00000539365 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
PTPN6-213ENST00000539365 TECPR2O15040 1411 aa20.09■□□□□ 0.81
PTPN6-213ENST00000539365 RGS17Q9UGC6 210 aaPredicted RBP20.08■□□□□ 0.81
PTPN6-213ENST00000539365 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
PTPN6-213ENST00000539365 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
PTPN6-213ENST00000539365 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
PTPN6-213ENST00000539365 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
PTPN6-213ENST00000539365 ORAI2Q96SN7 254 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms