RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
CACNB1-206ENST00000539338 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
CACNB1-206ENST00000539338 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
CACNB1-206ENST00000539338 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
CACNB1-206ENST00000539338 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
CACNB1-206ENST00000539338 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
CACNB1-206ENST00000539338 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
CACNB1-206ENST00000539338 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
CACNB1-206ENST00000539338 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
CACNB1-206ENST00000539338 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
CACNB1-206ENST00000539338 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
CACNB1-206ENST00000539338 ST18O60284 1047 aa18.02■□□□□ 0.48
CACNB1-206ENST00000539338 GORABQ5T7V8 394 aa18.02■□□□□ 0.47
CACNB1-206ENST00000539338 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
CACNB1-206ENST00000539338 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
CACNB1-206ENST00000539338 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
CACNB1-206ENST00000539338 CD109Q6YHK3 1445 aa18■□□□□ 0.47
CACNB1-206ENST00000539338 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
CACNB1-206ENST00000539338 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
CACNB1-206ENST00000539338 HTATSF1O43719 755 aaKnown RBP17.99■□□□□ 0.47
CACNB1-206ENST00000539338 GSE1Q14687 1217 aa17.99■□□□□ 0.47
CACNB1-206ENST00000539338 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
CACNB1-206ENST00000539338 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
CACNB1-206ENST00000539338 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
CACNB1-206ENST00000539338 COG3Q96JB2 828 aa17.98■□□□□ 0.47
CACNB1-206ENST00000539338 CUX1P39880 1505 aa17.98■□□□□ 0.47
CACNB1-206ENST00000539338 PLEKHH2Q8IVE3 1493 aa17.98■□□□□ 0.47
CACNB1-206ENST00000539338 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
CACNB1-206ENST00000539338 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
CACNB1-206ENST00000539338 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
CACNB1-206ENST00000539338 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
CACNB1-206ENST00000539338 NCOA2Q15596 1464 aa17.97■□□□□ 0.47
CACNB1-206ENST00000539338 C1orf141Q5JVX7 400 aa17.96■□□□□ 0.47
CACNB1-206ENST00000539338 TAF7LQ5H9L4 462 aa17.96■□□□□ 0.46
CACNB1-206ENST00000539338 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
CACNB1-206ENST00000539338 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
CACNB1-206ENST00000539338 RIPK4P57078 832 aa17.95■□□□□ 0.46
CACNB1-206ENST00000539338 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
CACNB1-206ENST00000539338 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
CACNB1-206ENST00000539338 DDX49Q9Y6V7 483 aaKnown RBP17.94■□□□□ 0.46
CACNB1-206ENST00000539338 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
CACNB1-206ENST00000539338 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
CACNB1-206ENST00000539338 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
CACNB1-206ENST00000539338 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
CACNB1-206ENST00000539338 CASKIN1Q8WXD9 1431 aa17.93■□□□□ 0.46
CACNB1-206ENST00000539338 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
CACNB1-206ENST00000539338 KIF16BQ96L93 1317 aa17.93■□□□□ 0.46
CACNB1-206ENST00000539338 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
CACNB1-206ENST00000539338 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
CACNB1-206ENST00000539338 RUNDC1Q96C34 613 aa17.91■□□□□ 0.46
CACNB1-206ENST00000539338 CSPP1Q1MSJ5 1256 aa17.91■□□□□ 0.46
CACNB1-206ENST00000539338 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
CACNB1-206ENST00000539338 CDCA7LQ96GN5 454 aa17.91■□□□□ 0.46
CACNB1-206ENST00000539338 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
CACNB1-206ENST00000539338 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
CACNB1-206ENST00000539338 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
CACNB1-206ENST00000539338 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
CACNB1-206ENST00000539338 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
CACNB1-206ENST00000539338 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
CACNB1-206ENST00000539338 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
CACNB1-206ENST00000539338 PHF14O94880 888 aa17.87■□□□□ 0.45
CACNB1-206ENST00000539338 TTC5Q8N0Z6 440 aa17.87■□□□□ 0.45
CACNB1-206ENST00000539338 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
CACNB1-206ENST00000539338 EIF2S2P20042 333 aaKnown RBP17.87■□□□□ 0.45
CACNB1-206ENST00000539338 TPM4P67936 248 aa17.86■□□□□ 0.45
CACNB1-206ENST00000539338 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
CACNB1-206ENST00000539338 CLSTN1O94985 981 aa17.86■□□□□ 0.45
CACNB1-206ENST00000539338 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
CACNB1-206ENST00000539338 BRD4O60885 1362 aaPredicted RBP17.86■□□□□ 0.45
CACNB1-206ENST00000539338 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
CACNB1-206ENST00000539338 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
CACNB1-206ENST00000539338 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 LNPKQ9C0E8 428 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 HMOX1P09601 288 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
CACNB1-206ENST00000539338 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
CACNB1-206ENST00000539338 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
CACNB1-206ENST00000539338 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
CACNB1-206ENST00000539338 TEFQ10587 303 aa17.84■□□□□ 0.45
CACNB1-206ENST00000539338 SKOR2Q2VWA4 1001 aaPredicted RBP17.84■□□□□ 0.45
CACNB1-206ENST00000539338 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
CACNB1-206ENST00000539338 ANO8Q9HCE9 1232 aaPredicted RBP17.83■□□□□ 0.44
CACNB1-206ENST00000539338 CABP2Q9NPB3 220 aa17.83■□□□□ 0.44
CACNB1-206ENST00000539338 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
CACNB1-206ENST00000539338 SF3A1Q15459 793 aaKnown RBP17.82■□□□□ 0.44
CACNB1-206ENST00000539338 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
CACNB1-206ENST00000539338 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
CACNB1-206ENST00000539338 DIAPH3Q9NSV4 1193 aa17.82■□□□□ 0.44
CACNB1-206ENST00000539338 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
CACNB1-206ENST00000539338 REC8O95072 547 aa17.81■□□□□ 0.44
CACNB1-206ENST00000539338 H3BQV1 296 aa17.81■□□□□ 0.44
CACNB1-206ENST00000539338 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
CACNB1-206ENST00000539338 NLRP2Q9NX02 1062 aa17.81■□□□□ 0.44
CACNB1-206ENST00000539338 CREBRFQ8IUR6 639 aa17.8■□□□□ 0.44
CACNB1-206ENST00000539338 STRN4Q9NRL3 753 aa17.8■□□□□ 0.44
CACNB1-206ENST00000539338 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
CACNB1-206ENST00000539338 MTHFSP49914 203 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 FKBP5Q13451 457 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms