RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 ZFYVE9O95405 1425 aa26.6■■□□□ 1.85
PDCD2-207ENST00000539212 SLC52A1Q9NWF4 448 aa26.59■■□□□ 1.85
PDCD2-207ENST00000539212 TMEM94Q12767 1356 aa26.58■■□□□ 1.85
PDCD2-207ENST00000539212 ROCK1Q13464 1354 aa26.58■■□□□ 1.85
PDCD2-207ENST00000539212 ITGAEP38570 1179 aa26.58■■□□□ 1.85
PDCD2-207ENST00000539212 RBM33Q96EV2 1170 aaKnown RBP26.58■■□□□ 1.85
PDCD2-207ENST00000539212 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
PDCD2-207ENST00000539212 RIMS2Q9UQ26 1411 aa26.56■■□□□ 1.84
PDCD2-207ENST00000539212 KCNA6P17658 529 aa26.54■■□□□ 1.84
PDCD2-207ENST00000539212 ROBO1Q9Y6N7 1651 aa26.54■■□□□ 1.84
PDCD2-207ENST00000539212 BCANQ96GW7 911 aa26.53■■□□□ 1.84
PDCD2-207ENST00000539212 NKTRP30414 1462 aaKnown RBP26.53■■□□□ 1.84
PDCD2-207ENST00000539212 PLEKHG1Q9ULL1 1385 aa26.5■■□□□ 1.83
PDCD2-207ENST00000539212 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
PDCD2-207ENST00000539212 PROSER2Q86WR7 435 aaPredicted RBP26.49■■□□□ 1.83
PDCD2-207ENST00000539212 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
PDCD2-207ENST00000539212 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
PDCD2-207ENST00000539212 NUP155O75694 1391 aa26.47■■□□□ 1.83
PDCD2-207ENST00000539212 NUTM2DQ5VT03 806 aaPredicted RBP26.47■■□□□ 1.83
PDCD2-207ENST00000539212 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
PDCD2-207ENST00000539212 FAM135BQ49AJ0 1406 aa26.44■■□□□ 1.82
PDCD2-207ENST00000539212 ADAMTS13Q76LX8 1427 aa26.42■■□□□ 1.82
PDCD2-207ENST00000539212 DIP2AQ14689 1571 aa26.39■■□□□ 1.82
PDCD2-207ENST00000539212 PHLPP1O60346 1717 aa26.39■■□□□ 1.81
PDCD2-207ENST00000539212 MSH6P52701 1360 aa26.38■■□□□ 1.81
PDCD2-207ENST00000539212 NRXN3Q9Y4C0 1643 aa26.38■■□□□ 1.81
PDCD2-207ENST00000539212 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
PDCD2-207ENST00000539212 CLTCL1P53675 1640 aa26.35■■□□□ 1.81
PDCD2-207ENST00000539212 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
PDCD2-207ENST00000539212 RRBP1Q9P2E9 1410 aaKnown RBP26.34■■□□□ 1.81
PDCD2-207ENST00000539212 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.34■■□□□ 1.81
PDCD2-207ENST00000539212 TBX22Q9Y458 520 aa26.34■■□□□ 1.81
PDCD2-207ENST00000539212 TRPM2O94759 1503 aa26.33■■□□□ 1.81
PDCD2-207ENST00000539212 RGS17Q9UGC6 210 aaPredicted RBP26.31■■□□□ 1.8
PDCD2-207ENST00000539212 PTPRUQ92729 1446 aa26.31■■□□□ 1.8
PDCD2-207ENST00000539212 XRN1Q8IZH2 1706 aaKnown RBP26.29■■□□□ 1.8
PDCD2-207ENST00000539212 NAIPQ13075 1403 aa26.29■■□□□ 1.8
PDCD2-207ENST00000539212 COL16A1Q07092 1604 aaPredicted RBP26.28■■□□□ 1.8
PDCD2-207ENST00000539212 SLAIN2Q9P270 581 aa26.28■■□□□ 1.8
PDCD2-207ENST00000539212 SETBP1Q9Y6X0 1596 aa26.28■■□□□ 1.8
PDCD2-207ENST00000539212 KIF1BO60333 1816 aa26.28■■□□□ 1.8
PDCD2-207ENST00000539212 NEXMIFQ5QGS0 1516 aa26.25■■□□□ 1.79
PDCD2-207ENST00000539212 C14orf37Q86TY3 774 aa26.25■■□□□ 1.79
PDCD2-207ENST00000539212 PIK3R4Q99570 1358 aa26.24■■□□□ 1.79
PDCD2-207ENST00000539212 NCOA3Q9Y6Q9 1424 aa26.22■■□□□ 1.79
PDCD2-207ENST00000539212 ZNF326Q5BKZ1 582 aaKnown RBP26.21■■□□□ 1.79
PDCD2-207ENST00000539212 AMOTL2Q9Y2J4 779 aa26.21■■□□□ 1.79
PDCD2-207ENST00000539212 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
PDCD2-207ENST00000539212 METP08581 1390 aa26.17■■□□□ 1.78
PDCD2-207ENST00000539212 NALCNQ8IZF0 1738 aa26.17■■□□□ 1.78
PDCD2-207ENST00000539212 SETD1AO15047 1707 aaKnown RBP26.16■■□□□ 1.78
PDCD2-207ENST00000539212 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
PDCD2-207ENST00000539212 POTEAQ6S8J7 498 aa26.15■■□□□ 1.78
PDCD2-207ENST00000539212 JCADQ9P266 1359 aa26.15■■□□□ 1.78
PDCD2-207ENST00000539212 C19orf44Q9H6X5 657 aa26.14■■□□□ 1.78
PDCD2-207ENST00000539212 LRP6O75581 1613 aa26.14■■□□□ 1.77
PDCD2-207ENST00000539212 SHPRHQ149N8 1683 aa26.13■■□□□ 1.77
PDCD2-207ENST00000539212 ATF3P18847 181 aa26.13■■□□□ 1.77
PDCD2-207ENST00000539212 CADPS2Q86UW7 1296 aa26.13■■□□□ 1.77
PDCD2-207ENST00000539212 PPLO60437 1756 aa26.11■■□□□ 1.77
PDCD2-207ENST00000539212 TRIM52Q96A61 297 aa26.11■■□□□ 1.77
PDCD2-207ENST00000539212 ASXL1Q8IXJ9 1541 aa26.09■■□□□ 1.77
PDCD2-207ENST00000539212 NHSL1Q5SYE7 1610 aa26.09■■□□□ 1.77
PDCD2-207ENST00000539212 DCCP43146 1447 aa26.07■■□□□ 1.76
PDCD2-207ENST00000539212 MST1RQ04912 1400 aa26.07■■□□□ 1.76
PDCD2-207ENST00000539212 BRINP3Q76B58 766 aa26.06■■□□□ 1.76
PDCD2-207ENST00000539212 ADGRL3Q9HAR2 1447 aa26.04■■□□□ 1.76
PDCD2-207ENST00000539212 SLC4A1APQ9BWU0 796 aaKnown RBP26.02■■□□□ 1.76
PDCD2-207ENST00000539212 FOXD1Q16676 465 aa26.01■■□□□ 1.75
PDCD2-207ENST00000539212 SPATA31A6Q5VVP1 1343 aa25.99■■□□□ 1.75
PDCD2-207ENST00000539212 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
PDCD2-207ENST00000539212 MEX3CQ5U5Q3 659 aaKnown RBP25.96■■□□□ 1.75
PDCD2-207ENST00000539212 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
PDCD2-207ENST00000539212 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
PDCD2-207ENST00000539212 ROBO2Q9HCK4 1378 aa25.95■■□□□ 1.75
PDCD2-207ENST00000539212 SETD5Q9C0A6 1442 aa25.92■■□□□ 1.74
PDCD2-207ENST00000539212 NUTM2BA6NNL0 878 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-207ENST00000539212 NUTM2EB1AL46 878 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-207ENST00000539212 VGFO15240 615 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-207ENST00000539212 NUTM2AQ8IVF1 878 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-207ENST00000539212 C1orf167Q5SNV9 1468 aa25.91■■□□□ 1.74
PDCD2-207ENST00000539212 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.74
PDCD2-207ENST00000539212 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
PDCD2-207ENST00000539212 LAMC1P11047 1609 aa25.88■■□□□ 1.73
PDCD2-207ENST00000539212 CCDC144AA2RUR9 1427 aa25.87■■□□□ 1.73
PDCD2-207ENST00000539212 SPATA31E1Q6ZUB1 1445 aa25.86■■□□□ 1.73
PDCD2-207ENST00000539212 PNPLA6Q8IY17 1366 aa25.85■■□□□ 1.73
PDCD2-207ENST00000539212 ADGRF5Q8IZF2 1346 aa25.85■■□□□ 1.73
PDCD2-207ENST00000539212 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
PDCD2-207ENST00000539212 RGL3Q3MIN7 710 aa25.82■■□□□ 1.72
PDCD2-207ENST00000539212 ZNF772Q68DY9 489 aaPredicted RBP25.82■■□□□ 1.72
PDCD2-207ENST00000539212 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
PDCD2-207ENST00000539212 KNDC1Q76NI1 1749 aa25.82■■□□□ 1.72
PDCD2-207ENST00000539212 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
PDCD2-207ENST00000539212 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
PDCD2-207ENST00000539212 AFF2P51816 1311 aa25.79■■□□□ 1.72
PDCD2-207ENST00000539212 C8orf37Q96NL8 207 aa25.75■■□□□ 1.71
PDCD2-207ENST00000539212 STK26Q9P289 416 aa25.75■■□□□ 1.71
PDCD2-207ENST00000539212 PIK3C2GO75747 1445 aa25.74■■□□□ 1.71
PDCD2-207ENST00000539212 COL22A1Q8NFW1 1626 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms