RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 PPLO60437 1756 aa22.3■■□□□ 1.16
PRPF19-203ENST00000539180 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
PRPF19-203ENST00000539180 TXNDC2Q86VQ3 553 aa22.29■■□□□ 1.16
PRPF19-203ENST00000539180 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
PRPF19-203ENST00000539180 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
PRPF19-203ENST00000539180 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
PRPF19-203ENST00000539180 EID1Q9Y6B2 187 aa22.27■■□□□ 1.16
PRPF19-203ENST00000539180 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
PRPF19-203ENST00000539180 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
PRPF19-203ENST00000539180 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
PRPF19-203ENST00000539180 ZNF335Q9H4Z2 1342 aaPredicted RBP22.26■■□□□ 1.15
PRPF19-203ENST00000539180 CHGAP10645 457 aaKnown RBP22.25■■□□□ 1.15
PRPF19-203ENST00000539180 CPS1P31327 1500 aa22.25■■□□□ 1.15
PRPF19-203ENST00000539180 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
PRPF19-203ENST00000539180 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
PRPF19-203ENST00000539180 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
PRPF19-203ENST00000539180 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
PRPF19-203ENST00000539180 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
PRPF19-203ENST00000539180 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
PRPF19-203ENST00000539180 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
PRPF19-203ENST00000539180 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
PRPF19-203ENST00000539180 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
PRPF19-203ENST00000539180 CERKQ8TCT0 537 aa22.16■■□□□ 1.14
PRPF19-203ENST00000539180 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
PRPF19-203ENST00000539180 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
PRPF19-203ENST00000539180 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.14
PRPF19-203ENST00000539180 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
PRPF19-203ENST00000539180 LRRC7Q96NW7 1537 aa22.13■■□□□ 1.13
PRPF19-203ENST00000539180 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
PRPF19-203ENST00000539180 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
PRPF19-203ENST00000539180 MYOM2P54296 1465 aa22.12■■□□□ 1.13
PRPF19-203ENST00000539180 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
PRPF19-203ENST00000539180 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
PRPF19-203ENST00000539180 NRXN1Q9ULB1 1477 aa22.09■■□□□ 1.13
PRPF19-203ENST00000539180 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
PRPF19-203ENST00000539180 TBX22Q9Y458 520 aa22.08■■□□□ 1.13
PRPF19-203ENST00000539180 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
PRPF19-203ENST00000539180 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
PRPF19-203ENST00000539180 LAMC1P11047 1609 aa22.06■■□□□ 1.12
PRPF19-203ENST00000539180 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
PRPF19-203ENST00000539180 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
PRPF19-203ENST00000539180 KCNA6P17658 529 aa22.04■■□□□ 1.12
PRPF19-203ENST00000539180 PRAG1Q86YV5 1406 aa22.04■■□□□ 1.12
PRPF19-203ENST00000539180 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
PRPF19-203ENST00000539180 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
PRPF19-203ENST00000539180 BCANQ96GW7 911 aa22.02■■□□□ 1.12
PRPF19-203ENST00000539180 METP08581 1390 aa22.01■■□□□ 1.11
PRPF19-203ENST00000539180 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
PRPF19-203ENST00000539180 FBXO41Q8TF61 875 aa22.01■■□□□ 1.11
PRPF19-203ENST00000539180 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
PRPF19-203ENST00000539180 KNDC1Q76NI1 1749 aa22■■□□□ 1.11
PRPF19-203ENST00000539180 TMEM94Q12767 1356 aa21.97■■□□□ 1.11
PRPF19-203ENST00000539180 PTCH1Q13635 1447 aa21.96■■□□□ 1.11
PRPF19-203ENST00000539180 NCOA3Q9Y6Q9 1424 aa21.94■■□□□ 1.1
PRPF19-203ENST00000539180 NALCNQ8IZF0 1738 aa21.94■■□□□ 1.1
PRPF19-203ENST00000539180 ILDR1Q86SU0 546 aaPredicted RBP21.93■■□□□ 1.1
PRPF19-203ENST00000539180 ADGRB1O14514 1584 aa21.92■■□□□ 1.1
PRPF19-203ENST00000539180 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
PRPF19-203ENST00000539180 TECPR2O15040 1411 aa21.91■■□□□ 1.1
PRPF19-203ENST00000539180 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.9■■□□□ 1.1
PRPF19-203ENST00000539180 AMOTL2Q9Y2J4 779 aa21.9■■□□□ 1.1
PRPF19-203ENST00000539180 PROSER2Q86WR7 435 aaPredicted RBP21.87■■□□□ 1.09
PRPF19-203ENST00000539180 STAC3Q96MF2 364 aa21.86■■□□□ 1.09
PRPF19-203ENST00000539180 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
PRPF19-203ENST00000539180 LRPPRCP42704 1394 aaKnown RBP21.86■■□□□ 1.09
PRPF19-203ENST00000539180 C14orf93Q9H972 538 aaKnown RBP21.85■■□□□ 1.09
PRPF19-203ENST00000539180 ROBO2Q9HCK4 1378 aa21.85■■□□□ 1.09
PRPF19-203ENST00000539180 DCCP43146 1447 aa21.84■■□□□ 1.09
PRPF19-203ENST00000539180 YTHDC2Q9H6S0 1430 aaKnown RBP21.84■■□□□ 1.09
PRPF19-203ENST00000539180 ADGRL3Q9HAR2 1447 aa21.84■■□□□ 1.09
PRPF19-203ENST00000539180 UBAP1LF5GYI3 381 aa21.84■■□□□ 1.09
PRPF19-203ENST00000539180 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
PRPF19-203ENST00000539180 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
PRPF19-203ENST00000539180 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
PRPF19-203ENST00000539180 DLC1Q96QB1 1528 aa21.83■■□□□ 1.09
PRPF19-203ENST00000539180 MSH6P52701 1360 aa21.83■■□□□ 1.08
PRPF19-203ENST00000539180 ABCC11Q96J66 1382 aa21.81■■□□□ 1.08
PRPF19-203ENST00000539180 CDC42BPGQ6DT37 1551 aa21.81■■□□□ 1.08
PRPF19-203ENST00000539180 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
PRPF19-203ENST00000539180 ARHGEF28Q8N1W1 1705 aaKnown RBP21.8■■□□□ 1.08
PRPF19-203ENST00000539180 ROBO1Q9Y6N7 1651 aa21.8■■□□□ 1.08
PRPF19-203ENST00000539180 TOM1O60784 492 aa21.8■■□□□ 1.08
PRPF19-203ENST00000539180 CFAP70Q5T0N1 1121 aa21.8■■□□□ 1.08
PRPF19-203ENST00000539180 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
PRPF19-203ENST00000539180 KDM2AQ9Y2K7 1162 aa21.77■■□□□ 1.08
PRPF19-203ENST00000539180 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
PRPF19-203ENST00000539180 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
PRPF19-203ENST00000539180 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
PRPF19-203ENST00000539180 MST1RQ04912 1400 aa21.73■■□□□ 1.07
PRPF19-203ENST00000539180 C19orf44Q9H6X5 657 aa21.73■■□□□ 1.07
PRPF19-203ENST00000539180 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
PRPF19-203ENST00000539180 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
PRPF19-203ENST00000539180 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
PRPF19-203ENST00000539180 PIP4K2BP78356 416 aa21.7■■□□□ 1.06
PRPF19-203ENST00000539180 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
PRPF19-203ENST00000539180 CADPS2Q86UW7 1296 aa21.69■■□□□ 1.06
PRPF19-203ENST00000539180 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
PRPF19-203ENST00000539180 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
PRPF19-203ENST00000539180 NHSL1Q5SYE7 1610 aa21.69■■□□□ 1.06
PRPF19-203ENST00000539180 STK26Q9P289 416 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms