RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 YTHDC1Q96MU7 727 aaKnown RBP35.6■■■■□ 3.29
KLHL42-202ENST00000539176 USP47Q96K76 1375 aa35.59■■■■□ 3.29
KLHL42-202ENST00000539176 PLPPR3Q6T4P5 718 aa35.59■■■■□ 3.29
KLHL42-202ENST00000539176 C3P01024 1663 aa35.59■■■■□ 3.29
KLHL42-202ENST00000539176 STAC3Q96MF2 364 aa35.58■■■■□ 3.29
KLHL42-202ENST00000539176 NUTM2DQ5VT03 806 aaPredicted RBP35.56■■■■□ 3.28
KLHL42-202ENST00000539176 NEXMIFQ5QGS0 1516 aa35.56■■■■□ 3.28
KLHL42-202ENST00000539176 TNRQ92752 1358 aa35.54■■■■□ 3.28
KLHL42-202ENST00000539176 RPGRIP1LQ68CZ1 1315 aa35.53■■■■□ 3.28
KLHL42-202ENST00000539176 GPRASP1Q5JY77 1395 aa35.52■■■■□ 3.28
KLHL42-202ENST00000539176 SCAF1Q9H7N4 1312 aaKnown RBP35.52■■■■□ 3.28
KLHL42-202ENST00000539176 STAG3Q9UJ98 1225 aa35.52■■■■□ 3.28
KLHL42-202ENST00000539176 NRXN1Q9ULB1 1477 aa35.51■■■■□ 3.28
KLHL42-202ENST00000539176 RIMS1Q86UR5 1692 aaKnown RBP35.5■■■■□ 3.27
KLHL42-202ENST00000539176 CFAP70Q5T0N1 1121 aa35.48■■■■□ 3.27
KLHL42-202ENST00000539176 LAMC1P11047 1609 aa35.48■■■■□ 3.27
KLHL42-202ENST00000539176 A2ML1A8K2U0 1454 aa35.47■■■■□ 3.27
KLHL42-202ENST00000539176 KIAA1210Q9ULL0 1709 aa35.45■■■■□ 3.27
KLHL42-202ENST00000539176 ADAMTSL3P82987 1691 aa35.45■■■■□ 3.27
KLHL42-202ENST00000539176 C11orf95C9JLR9 678 aaPredicted RBP35.43■■■■□ 3.26
KLHL42-202ENST00000539176 SENP3Q9H4L4 574 aaPredicted RBP35.43■■■■□ 3.26
KLHL42-202ENST00000539176 PIK3C2GO75747 1445 aa35.42■■■■□ 3.26
KLHL42-202ENST00000539176 ST20-MTHFSA0A0A6YYL1 179 aa35.41■■■■□ 3.26
KLHL42-202ENST00000539176 ANP32CO43423 234 aa35.41■■■■□ 3.26
KLHL42-202ENST00000539176 VGFO15240 615 aaPredicted RBP35.39■■■■□ 3.26
KLHL42-202ENST00000539176 WASHC2AQ641Q2 1341 aa35.39■■■■□ 3.26
KLHL42-202ENST00000539176 POLR1AO95602 1720 aaPredicted RBP35.39■■■■□ 3.26
KLHL42-202ENST00000539176 CCER2I3L3R5 266 aa35.38■■■■□ 3.25
KLHL42-202ENST00000539176 IQGAP1P46940 1657 aa35.36■■■■□ 3.25
KLHL42-202ENST00000539176 UBR1Q8IWV7 1749 aa35.35■■■■□ 3.25
KLHL42-202ENST00000539176 ZFYVE9O95405 1425 aa35.34■■■■□ 3.25
KLHL42-202ENST00000539176 RIMS2Q9UQ26 1411 aa35.33■■■■□ 3.25
KLHL42-202ENST00000539176 C14orf93Q9H972 538 aaKnown RBP35.32■■■■□ 3.24
KLHL42-202ENST00000539176 CCDC7Q96M83 1385 aa35.32■■■■□ 3.24
KLHL42-202ENST00000539176 NLRP1Q9C000 1473 aa35.31■■■■□ 3.24
KLHL42-202ENST00000539176 SCAF11Q99590 1463 aaKnown RBP35.29■■■■□ 3.24
KLHL42-202ENST00000539176 KIF7Q2M1P5 1343 aa35.28■■■■□ 3.24
KLHL42-202ENST00000539176 KDM5AP29375 1690 aaKnown RBP35.28■■■■□ 3.24
KLHL42-202ENST00000539176 TMEM132EQ6IEE7 984 aa35.26■■■■□ 3.24
KLHL42-202ENST00000539176 SETBP1Q9Y6X0 1596 aa35.26■■■■□ 3.23
KLHL42-202ENST00000539176 MYO3AQ8NEV4 1616 aa35.26■■■■□ 3.23
KLHL42-202ENST00000539176 ADGRB1O14514 1584 aa35.25■■■■□ 3.23
KLHL42-202ENST00000539176 POLR3GLQ9BT43 218 aa35.21■■■■□ 3.23
KLHL42-202ENST00000539176 GTF3C3Q9Y5Q9 886 aa35.2■■■■□ 3.23
KLHL42-202ENST00000539176 TESK2Q96S53 571 aa35.2■■■■□ 3.22
KLHL42-202ENST00000539176 TMEM2Q9UHN6 1383 aa35.19■■■■□ 3.22
KLHL42-202ENST00000539176 ASXL1Q8IXJ9 1541 aa35.17■■■■□ 3.22
KLHL42-202ENST00000539176 ALKQ9UM73 1620 aa35.16■■■■□ 3.22
KLHL42-202ENST00000539176 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.15■■■■□ 3.22
KLHL42-202ENST00000539176 TRAK1Q9UPV9 953 aa35.15■■■■□ 3.22
KLHL42-202ENST00000539176 EIF3AQ14152 1382 aaKnown RBP35.13■■■■□ 3.21
KLHL42-202ENST00000539176 DISP3Q9P2K9 1392 aa35.12■■■■□ 3.21
KLHL42-202ENST00000539176 PTPRMP28827 1452 aa35.12■■■■□ 3.21
KLHL42-202ENST00000539176 NRXN3Q9Y4C0 1643 aa35.11■■■■□ 3.21
KLHL42-202ENST00000539176 CEP170BQ9Y4F5 1589 aaPredicted RBP35.11■■■■□ 3.21
KLHL42-202ENST00000539176 LTKP29376 864 aa35.09■■■■□ 3.21
KLHL42-202ENST00000539176 SETD1AO15047 1707 aaKnown RBP35.08■■■■□ 3.21
KLHL42-202ENST00000539176 HDGFP51858 240 aaKnown RBP35.07■■■■□ 3.21
KLHL42-202ENST00000539176 STK26Q9P289 416 aa35.06■■■■□ 3.2
KLHL42-202ENST00000539176 SLIT1O75093 1534 aa35.05■■■■□ 3.2
KLHL42-202ENST00000539176 ARHGAP23Q9P227 1491 aa35.04■■■■□ 3.2
KLHL42-202ENST00000539176 ARHGEF28Q8N1W1 1705 aaKnown RBP35.04■■■■□ 3.2
KLHL42-202ENST00000539176 TXNDC2Q86VQ3 553 aa35.04■■■■□ 3.2
KLHL42-202ENST00000539176 THEMISQ8N1K5 641 aaPredicted RBP35.03■■■■□ 3.2
KLHL42-202ENST00000539176 TMF1P82094 1093 aa35.03■■■■□ 3.2
KLHL42-202ENST00000539176 BCANQ96GW7 911 aa35.03■■■■□ 3.2
KLHL42-202ENST00000539176 SETD1BQ9UPS6 1966 aaKnown RBP35.03■■■■□ 3.2
KLHL42-202ENST00000539176 ZNF142P52746 1687 aaPredicted RBP35.01■■■■□ 3.2
KLHL42-202ENST00000539176 CENPJQ9HC77 1338 aaPredicted RBP35■■■■□ 3.19
KLHL42-202ENST00000539176 YTHDC2Q9H6S0 1430 aaKnown RBP35■■■■□ 3.19
KLHL42-202ENST00000539176 QRICH2Q9H0J4 1663 aa35■■■■□ 3.19
KLHL42-202ENST00000539176 EID1Q9Y6B2 187 aa34.99■■■■□ 3.19
KLHL42-202ENST00000539176 PLEKHG1Q9ULL1 1385 aa34.96■■■■□ 3.19
KLHL42-202ENST00000539176 METP08581 1390 aa34.95■■■■□ 3.19
KLHL42-202ENST00000539176 ADAMTS13Q76LX8 1427 aa34.93■■■■□ 3.18
KLHL42-202ENST00000539176 SAFB2Q14151 953 aaKnown RBP eCLIP34.91■■■■□ 3.18
KLHL42-202ENST00000539176 PRKRIP1Q9H875 184 aaPredicted RBP34.89■■■■□ 3.18
KLHL42-202ENST00000539176 SLC26A8Q96RN1 970 aa34.88■■■■□ 3.17
KLHL42-202ENST00000539176 LRPPRCP42704 1394 aaKnown RBP34.88■■■■□ 3.17
KLHL42-202ENST00000539176 SBNO2Q9Y2G9 1366 aa34.88■■■■□ 3.17
KLHL42-202ENST00000539176 KDM4FA0A1W2PPD8 638 aa34.87■■■■□ 3.17
KLHL42-202ENST00000539176 PRAM1Q96QH2 718 aa34.86■■■■□ 3.17
KLHL42-202ENST00000539176 MED14O60244 1454 aa34.83■■■■□ 3.17
KLHL42-202ENST00000539176 POGKQ9P215 609 aa34.82■■■■□ 3.16
KLHL42-202ENST00000539176 CDCA8Q53HL2 280 aa34.8■■■■□ 3.16
KLHL42-202ENST00000539176 ABCC11Q96J66 1382 aa34.8■■■■□ 3.16
KLHL42-202ENST00000539176 DLC1Q96QB1 1528 aa34.79■■■■□ 3.16
KLHL42-202ENST00000539176 WAPLQ7Z5K2 1190 aa34.79■■■■□ 3.16
KLHL42-202ENST00000539176 MYOM1P52179 1685 aa34.78■■■■□ 3.16
KLHL42-202ENST00000539176 PLEKHH1Q9ULM0 1364 aa34.78■■■■□ 3.16
KLHL42-202ENST00000539176 TULP4Q9NRJ4 1543 aa34.78■■■■□ 3.16
KLHL42-202ENST00000539176 SLC24A1O60721 1099 aa34.77■■■■□ 3.16
KLHL42-202ENST00000539176 ANKLE2Q86XL3 938 aa34.77■■■■□ 3.16
KLHL42-202ENST00000539176 MINK1Q8N4C8 1332 aaPredicted RBP34.77■■■■□ 3.16
KLHL42-202ENST00000539176 KNDC1Q76NI1 1749 aa34.76■■■■□ 3.16
KLHL42-202ENST00000539176 CNGB1Q14028 1251 aaPredicted RBP34.75■■■■□ 3.15
KLHL42-202ENST00000539176 PTPRUQ92729 1446 aa34.73■■■■□ 3.15
KLHL42-202ENST00000539176 PANK3Q9H999 370 aa34.73■■■■□ 3.15
KLHL42-202ENST00000539176 TBX22Q9Y458 520 aa34.72■■■■□ 3.15
KLHL42-202ENST00000539176 TECPR2O15040 1411 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms