RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 NOS1P29475 1434 aa9.74□□□□□ -0.85
USP30-210ENST00000539121 XIRP1Q702N8 1843 aaKnown RBP9.74□□□□□ -0.85
USP30-210ENST00000539121 TET3O43151 1660 aa9.74□□□□□ -0.85
USP30-210ENST00000539121 ADGRL2O95490 1459 aa9.72□□□□□ -0.85
USP30-210ENST00000539121 RPRD2Q5VT52 1461 aaKnown RBP9.72□□□□□ -0.85
USP30-210ENST00000539121 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
USP30-210ENST00000539121 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
USP30-210ENST00000539121 TMEM94Q12767 1356 aa9.72□□□□□ -0.85
USP30-210ENST00000539121 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
USP30-210ENST00000539121 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
USP30-210ENST00000539121 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
USP30-210ENST00000539121 RGS17Q9UGC6 210 aaPredicted RBP9.7□□□□□ -0.86
USP30-210ENST00000539121 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
USP30-210ENST00000539121 ADGRB3O60242 1522 aa9.7□□□□□ -0.86
USP30-210ENST00000539121 NWD1Q149M9 1564 aa9.68□□□□□ -0.86
USP30-210ENST00000539121 NCOA3Q9Y6Q9 1424 aa9.68□□□□□ -0.86
USP30-210ENST00000539121 MSH6P52701 1360 aa9.68□□□□□ -0.86
USP30-210ENST00000539121 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
USP30-210ENST00000539121 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
USP30-210ENST00000539121 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP30-210ENST00000539121 BCANQ96GW7 911 aa9.67□□□□□ -0.86
USP30-210ENST00000539121 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
USP30-210ENST00000539121 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
USP30-210ENST00000539121 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
USP30-210ENST00000539121 CHD2O14647 1828 aaKnown RBP9.66□□□□□ -0.86
USP30-210ENST00000539121 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.86
USP30-210ENST00000539121 RIMS2Q9UQ26 1411 aa9.65□□□□□ -0.87
USP30-210ENST00000539121 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
USP30-210ENST00000539121 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
USP30-210ENST00000539121 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
USP30-210ENST00000539121 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
USP30-210ENST00000539121 GCC2Q8IWJ2 1684 aa9.64□□□□□ -0.87
USP30-210ENST00000539121 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
USP30-210ENST00000539121 JCADQ9P266 1359 aa9.63□□□□□ -0.87
USP30-210ENST00000539121 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
USP30-210ENST00000539121 POTEAQ6S8J7 498 aa9.63□□□□□ -0.87
USP30-210ENST00000539121 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
USP30-210ENST00000539121 C19orf44Q9H6X5 657 aa9.62□□□□□ -0.87
USP30-210ENST00000539121 UNC13BO14795 1591 aa9.62□□□□□ -0.87
USP30-210ENST00000539121 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
USP30-210ENST00000539121 PHLPP1O60346 1717 aa9.61□□□□□ -0.87
USP30-210ENST00000539121 SPATA31A6Q5VVP1 1343 aa9.6□□□□□ -0.87
USP30-210ENST00000539121 ADAMTS13Q76LX8 1427 aa9.6□□□□□ -0.87
USP30-210ENST00000539121 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
USP30-210ENST00000539121 E9PCH4 1651 aa9.59□□□□□ -0.87
USP30-210ENST00000539121 ATF3P18847 181 aa9.59□□□□□ -0.87
USP30-210ENST00000539121 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
USP30-210ENST00000539121 IQGAP3Q86VI3 1631 aa9.59□□□□□ -0.87
USP30-210ENST00000539121 COL16A1Q07092 1604 aaPredicted RBP9.58□□□□□ -0.88
USP30-210ENST00000539121 NUP155O75694 1391 aa9.58□□□□□ -0.88
USP30-210ENST00000539121 DCCP43146 1447 aa9.57□□□□□ -0.88
USP30-210ENST00000539121 TRPM2O94759 1503 aa9.57□□□□□ -0.88
USP30-210ENST00000539121 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.57□□□□□ -0.88
USP30-210ENST00000539121 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
USP30-210ENST00000539121 AMOTL2Q9Y2J4 779 aa9.57□□□□□ -0.88
USP30-210ENST00000539121 AHDC1Q5TGY3 1603 aaPredicted RBP9.56□□□□□ -0.88
USP30-210ENST00000539121 NUTM2DQ5VT03 806 aaPredicted RBP9.55□□□□□ -0.88
USP30-210ENST00000539121 BRINP3Q76B58 766 aa9.55□□□□□ -0.88
USP30-210ENST00000539121 SRCAPQ6ZRS2 3230 aa9.55□□□□□ -0.88
USP30-210ENST00000539121 SHPRHQ149N8 1683 aa9.55□□□□□ -0.88
USP30-210ENST00000539121 MEX3CQ5U5Q3 659 aaKnown RBP9.54□□□□□ -0.88
USP30-210ENST00000539121 SLC4A1APQ9BWU0 796 aaKnown RBP9.54□□□□□ -0.88
USP30-210ENST00000539121 PTPRUQ92729 1446 aa9.54□□□□□ -0.88
USP30-210ENST00000539121 SETBP1Q9Y6X0 1596 aa9.54□□□□□ -0.88
USP30-210ENST00000539121 LRP6O75581 1613 aa9.53□□□□□ -0.88
USP30-210ENST00000539121 LRRC59Q96AG4 307 aaKnown RBP9.52□□□□□ -0.89
USP30-210ENST00000539121 SETD5Q9C0A6 1442 aa9.52□□□□□ -0.89
USP30-210ENST00000539121 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
USP30-210ENST00000539121 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
USP30-210ENST00000539121 RXRBP28702 533 aa9.51□□□□□ -0.89
USP30-210ENST00000539121 ZNF326Q5BKZ1 582 aaKnown RBP9.51□□□□□ -0.89
USP30-210ENST00000539121 NRXN3Q9Y4C0 1643 aa9.51□□□□□ -0.89
USP30-210ENST00000539121 MST1RQ04912 1400 aa9.5□□□□□ -0.89
USP30-210ENST00000539121 ITGAEP38570 1179 aa9.5□□□□□ -0.89
USP30-210ENST00000539121 UPF1Q92900 1129 aaKnown RBP eCLIP9.5□□□□□ -0.89
USP30-210ENST00000539121 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
USP30-210ENST00000539121 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
USP30-210ENST00000539121 METP08581 1390 aa9.5□□□□□ -0.89
USP30-210ENST00000539121 SETD1AO15047 1707 aaKnown RBP9.49□□□□□ -0.89
USP30-210ENST00000539121 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
USP30-210ENST00000539121 VGFO15240 615 aaPredicted RBP9.48□□□□□ -0.89
USP30-210ENST00000539121 NHSL1Q5SYE7 1610 aa9.48□□□□□ -0.89
USP30-210ENST00000539121 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
USP30-210ENST00000539121 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
USP30-210ENST00000539121 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
USP30-210ENST00000539121 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
USP30-210ENST00000539121 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
USP30-210ENST00000539121 RPGRIP1LQ68CZ1 1315 aa9.47□□□□□ -0.89
USP30-210ENST00000539121 KIF1BO60333 1816 aa9.47□□□□□ -0.89
USP30-210ENST00000539121 PRAG1Q86YV5 1406 aa9.47□□□□□ -0.89
USP30-210ENST00000539121 EP400Q96L91 3159 aa9.46□□□□□ -0.89
USP30-210ENST00000539121 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
USP30-210ENST00000539121 RNF39Q9H2S5 420 aa9.46□□□□□ -0.9
USP30-210ENST00000539121 AFF2P51816 1311 aa9.46□□□□□ -0.9
USP30-210ENST00000539121 PTCH1Q13635 1447 aa9.46□□□□□ -0.9
USP30-210ENST00000539121 CACNB1Q02641 598 aaPredicted RBP9.45□□□□□ -0.9
USP30-210ENST00000539121 PNPLA6Q8IY17 1366 aa9.45□□□□□ -0.9
USP30-210ENST00000539121 NAIPQ13075 1403 aa9.45□□□□□ -0.9
USP30-210ENST00000539121 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
USP30-210ENST00000539121 C1orf167Q5SNV9 1468 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms