RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
CRX-202ENST00000539067 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
CRX-202ENST00000539067 NLRP1Q9C000 1473 aa17.14■□□□□ 0.34
CRX-202ENST00000539067 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
CRX-202ENST00000539067 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
CRX-202ENST00000539067 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
CRX-202ENST00000539067 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
CRX-202ENST00000539067 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CRX-202ENST00000539067 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
CRX-202ENST00000539067 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
CRX-202ENST00000539067 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
CRX-202ENST00000539067 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
CRX-202ENST00000539067 TRPM1Q7Z4N2 1603 aa17.11■□□□□ 0.33
CRX-202ENST00000539067 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
CRX-202ENST00000539067 ZNF142P52746 1687 aaPredicted RBP17.11■□□□□ 0.33
CRX-202ENST00000539067 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
CRX-202ENST00000539067 USP47Q96K76 1375 aa17.09■□□□□ 0.33
CRX-202ENST00000539067 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
CRX-202ENST00000539067 THEMISQ8N1K5 641 aaPredicted RBP17.09■□□□□ 0.33
CRX-202ENST00000539067 KIF1BO60333 1816 aa17.09■□□□□ 0.33
CRX-202ENST00000539067 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.33
CRX-202ENST00000539067 ADGRB3O60242 1522 aa17.08■□□□□ 0.32
CRX-202ENST00000539067 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
CRX-202ENST00000539067 LTKP29376 864 aa17.06■□□□□ 0.32
CRX-202ENST00000539067 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
CRX-202ENST00000539067 LAMC1P11047 1609 aa17.05■□□□□ 0.32
CRX-202ENST00000539067 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
CRX-202ENST00000539067 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
CRX-202ENST00000539067 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
CRX-202ENST00000539067 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
CRX-202ENST00000539067 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
CRX-202ENST00000539067 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
CRX-202ENST00000539067 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
CRX-202ENST00000539067 ANKLE2Q86XL3 938 aa17.01■□□□□ 0.31
CRX-202ENST00000539067 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
CRX-202ENST00000539067 IFT172Q9UG01 1749 aa17■□□□□ 0.31
CRX-202ENST00000539067 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
CRX-202ENST00000539067 KDM5AP29375 1690 aaKnown RBP16.99■□□□□ 0.31
CRX-202ENST00000539067 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
CRX-202ENST00000539067 ZFYVE9O95405 1425 aa16.99■□□□□ 0.31
CRX-202ENST00000539067 BCANQ96GW7 911 aa16.99■□□□□ 0.31
CRX-202ENST00000539067 SLIT1O75093 1534 aa16.99■□□□□ 0.31
CRX-202ENST00000539067 MYOM2P54296 1465 aa16.98■□□□□ 0.31
CRX-202ENST00000539067 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
CRX-202ENST00000539067 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
CRX-202ENST00000539067 SCAF11Q99590 1463 aaKnown RBP16.97■□□□□ 0.31
CRX-202ENST00000539067 KIAA1210Q9ULL0 1709 aa16.97■□□□□ 0.31
CRX-202ENST00000539067 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
CRX-202ENST00000539067 ANP32CO43423 234 aa16.96■□□□□ 0.31
CRX-202ENST00000539067 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
CRX-202ENST00000539067 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
CRX-202ENST00000539067 ADGRF5Q8IZF2 1346 aa16.95■□□□□ 0.3
CRX-202ENST00000539067 PPLO60437 1756 aa16.93■□□□□ 0.3
CRX-202ENST00000539067 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
CRX-202ENST00000539067 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
CRX-202ENST00000539067 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
CRX-202ENST00000539067 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
CRX-202ENST00000539067 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
CRX-202ENST00000539067 RPGRIP1LQ68CZ1 1315 aa16.91■□□□□ 0.3
CRX-202ENST00000539067 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
CRX-202ENST00000539067 VGFO15240 615 aaPredicted RBP16.9■□□□□ 0.3
CRX-202ENST00000539067 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
CRX-202ENST00000539067 MED14O60244 1454 aa16.88■□□□□ 0.29
CRX-202ENST00000539067 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
CRX-202ENST00000539067 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
CRX-202ENST00000539067 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
CRX-202ENST00000539067 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
CRX-202ENST00000539067 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
CRX-202ENST00000539067 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
CRX-202ENST00000539067 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
CRX-202ENST00000539067 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
CRX-202ENST00000539067 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
CRX-202ENST00000539067 TMEM132EQ6IEE7 984 aa16.84■□□□□ 0.29
CRX-202ENST00000539067 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.29
CRX-202ENST00000539067 METP08581 1390 aa16.83■□□□□ 0.28
CRX-202ENST00000539067 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
CRX-202ENST00000539067 TESK2Q96S53 571 aa16.81■□□□□ 0.28
CRX-202ENST00000539067 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
CRX-202ENST00000539067 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
CRX-202ENST00000539067 TBX22Q9Y458 520 aa16.8■□□□□ 0.28
CRX-202ENST00000539067 TMF1P82094 1093 aa16.8■□□□□ 0.28
CRX-202ENST00000539067 STK26Q9P289 416 aa16.79■□□□□ 0.28
CRX-202ENST00000539067 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
CRX-202ENST00000539067 C14orf93Q9H972 538 aaKnown RBP16.79■□□□□ 0.28
CRX-202ENST00000539067 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
CRX-202ENST00000539067 STRCP1A6NGW2 1772 aa16.77■□□□□ 0.28
CRX-202ENST00000539067 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.27
CRX-202ENST00000539067 KCNA6P17658 529 aa16.76■□□□□ 0.27
CRX-202ENST00000539067 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
CRX-202ENST00000539067 ADGRB1O14514 1584 aa16.76■□□□□ 0.27
CRX-202ENST00000539067 PRKRIP1Q9H875 184 aaPredicted RBP16.76■□□□□ 0.27
CRX-202ENST00000539067 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
CRX-202ENST00000539067 DIP2AQ14689 1571 aa16.73■□□□□ 0.27
CRX-202ENST00000539067 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
CRX-202ENST00000539067 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
CRX-202ENST00000539067 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
CRX-202ENST00000539067 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
CRX-202ENST00000539067 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
CRX-202ENST00000539067 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
CRX-202ENST00000539067 SAFB2Q14151 953 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms