RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 BCANQ96GW7 911 aa22.15■■□□□ 1.14
PBX3-212ENST00000538998 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
PBX3-212ENST00000538998 PHLPP1O60346 1717 aa22.13■■□□□ 1.13
PBX3-212ENST00000538998 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
PBX3-212ENST00000538998 RPRD2Q5VT52 1461 aaKnown RBP22.11■■□□□ 1.13
PBX3-212ENST00000538998 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
PBX3-212ENST00000538998 APLP2Q06481 763 aa22.11■■□□□ 1.13
PBX3-212ENST00000538998 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
PBX3-212ENST00000538998 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
PBX3-212ENST00000538998 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.13
PBX3-212ENST00000538998 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.13
PBX3-212ENST00000538998 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
PBX3-212ENST00000538998 ADGRL2O95490 1459 aa22.07■■□□□ 1.12
PBX3-212ENST00000538998 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
PBX3-212ENST00000538998 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
PBX3-212ENST00000538998 SPATA31A6Q5VVP1 1343 aa22.06■■□□□ 1.12
PBX3-212ENST00000538998 CHD2O14647 1828 aaKnown RBP22.05■■□□□ 1.12
PBX3-212ENST00000538998 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
PBX3-212ENST00000538998 ANKRD50Q9ULJ7 1429 aa22.02■■□□□ 1.12
PBX3-212ENST00000538998 GCC2Q8IWJ2 1684 aa22.01■■□□□ 1.11
PBX3-212ENST00000538998 MEX3CQ5U5Q3 659 aaKnown RBP22.01■■□□□ 1.11
PBX3-212ENST00000538998 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
PBX3-212ENST00000538998 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
PBX3-212ENST00000538998 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.01■■□□□ 1.11
PBX3-212ENST00000538998 TMEM131LA2VDJ0 1609 aa22.01■■□□□ 1.11
PBX3-212ENST00000538998 LRP6O75581 1613 aa22.01■■□□□ 1.11
PBX3-212ENST00000538998 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
PBX3-212ENST00000538998 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
PBX3-212ENST00000538998 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
PBX3-212ENST00000538998 PIK3R4Q99570 1358 aa21.98■■□□□ 1.11
PBX3-212ENST00000538998 MYO5BQ9ULV0 1848 aa21.97■■□□□ 1.11
PBX3-212ENST00000538998 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
PBX3-212ENST00000538998 ATF3P18847 181 aa21.96■■□□□ 1.11
PBX3-212ENST00000538998 ADAMTS13Q76LX8 1427 aa21.96■■□□□ 1.11
PBX3-212ENST00000538998 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
PBX3-212ENST00000538998 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
PBX3-212ENST00000538998 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
PBX3-212ENST00000538998 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
PBX3-212ENST00000538998 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
PBX3-212ENST00000538998 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
PBX3-212ENST00000538998 UNC13BO14795 1591 aa21.91■■□□□ 1.1
PBX3-212ENST00000538998 TRPM2O94759 1503 aa21.9■■□□□ 1.1
PBX3-212ENST00000538998 RXRBP28702 533 aa21.89■■□□□ 1.09
PBX3-212ENST00000538998 NUTM2DQ5VT03 806 aaPredicted RBP21.89■■□□□ 1.09
PBX3-212ENST00000538998 BRINP3Q76B58 766 aa21.89■■□□□ 1.09
PBX3-212ENST00000538998 DCCP43146 1447 aa21.89■■□□□ 1.09
PBX3-212ENST00000538998 CDK12Q9NYV4 1490 aaPredicted RBP21.88■■□□□ 1.09
PBX3-212ENST00000538998 AMOTL2Q9Y2J4 779 aa21.87■■□□□ 1.09
PBX3-212ENST00000538998 E9PCH4 1651 aa21.86■■□□□ 1.09
PBX3-212ENST00000538998 PTPRUQ92729 1446 aa21.84■■□□□ 1.09
PBX3-212ENST00000538998 NUTM2BA6NNL0 878 aaPredicted RBP21.84■■□□□ 1.09
PBX3-212ENST00000538998 NUTM2EB1AL46 878 aaPredicted RBP21.84■■□□□ 1.09
PBX3-212ENST00000538998 NUTM2AQ8IVF1 878 aaPredicted RBP21.84■■□□□ 1.09
PBX3-212ENST00000538998 ASXL1Q8IXJ9 1541 aa21.84■■□□□ 1.09
PBX3-212ENST00000538998 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.09
PBX3-212ENST00000538998 IQGAP3Q86VI3 1631 aa21.82■■□□□ 1.08
PBX3-212ENST00000538998 AFF2P51816 1311 aa21.81■■□□□ 1.08
PBX3-212ENST00000538998 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
PBX3-212ENST00000538998 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
PBX3-212ENST00000538998 MST1RQ04912 1400 aa21.79■■□□□ 1.08
PBX3-212ENST00000538998 LRRC59Q96AG4 307 aaKnown RBP21.78■■□□□ 1.08
PBX3-212ENST00000538998 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
PBX3-212ENST00000538998 NHSL1Q5SYE7 1610 aa21.77■■□□□ 1.07
PBX3-212ENST00000538998 NUP155O75694 1391 aa21.76■■□□□ 1.07
PBX3-212ENST00000538998 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
PBX3-212ENST00000538998 C8orf37Q96NL8 207 aa21.73■■□□□ 1.07
PBX3-212ENST00000538998 RGS12O14924 1447 aa21.72■■□□□ 1.07
PBX3-212ENST00000538998 ADGRL3Q9HAR2 1447 aa21.72■■□□□ 1.07
PBX3-212ENST00000538998 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
PBX3-212ENST00000538998 PNPLA6Q8IY17 1366 aa21.72■■□□□ 1.07
PBX3-212ENST00000538998 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
PBX3-212ENST00000538998 METP08581 1390 aa21.71■■□□□ 1.07
PBX3-212ENST00000538998 ZNF326Q5BKZ1 582 aaKnown RBP21.69■■□□□ 1.06
PBX3-212ENST00000538998 DDX17Q92841 729 aaKnown RBP21.67■■□□□ 1.06
PBX3-212ENST00000538998 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
PBX3-212ENST00000538998 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
PBX3-212ENST00000538998 NALCNQ8IZF0 1738 aa21.64■■□□□ 1.06
PBX3-212ENST00000538998 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.05
PBX3-212ENST00000538998 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
PBX3-212ENST00000538998 NEXMIFQ5QGS0 1516 aa21.61■■□□□ 1.05
PBX3-212ENST00000538998 ADAMTS2O95450 1211 aa21.61■■□□□ 1.05
PBX3-212ENST00000538998 LAMC1P11047 1609 aa21.61■■□□□ 1.05
PBX3-212ENST00000538998 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
PBX3-212ENST00000538998 SOS2Q07890 1332 aaPredicted RBP21.58■■□□□ 1.05
PBX3-212ENST00000538998 ITGAEP38570 1179 aa21.58■■□□□ 1.05
PBX3-212ENST00000538998 USP21Q9UK80 565 aa21.58■■□□□ 1.05
PBX3-212ENST00000538998 FOXD1Q16676 465 aa21.57■■□□□ 1.04
PBX3-212ENST00000538998 TRPC5Q9UL62 973 aaPredicted RBP21.57■■□□□ 1.04
PBX3-212ENST00000538998 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
PBX3-212ENST00000538998 FNBP4Q8N3X1 1017 aaPredicted RBP21.54■■□□□ 1.04
PBX3-212ENST00000538998 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
PBX3-212ENST00000538998 PRAG1Q86YV5 1406 aa21.54■■□□□ 1.04
PBX3-212ENST00000538998 ROBO2Q9HCK4 1378 aa21.53■■□□□ 1.04
PBX3-212ENST00000538998 VGFO15240 615 aaPredicted RBP21.52■■□□□ 1.04
PBX3-212ENST00000538998 ATRNO75882 1429 aa21.52■■□□□ 1.04
PBX3-212ENST00000538998 COL22A1Q8NFW1 1626 aaPredicted RBP21.51■■□□□ 1.03
PBX3-212ENST00000538998 ZRANB1Q9UGI0 708 aa21.5■■□□□ 1.03
PBX3-212ENST00000538998 HFM1A2PYH4 1435 aa21.49■■□□□ 1.03
PBX3-212ENST00000538998 KIF1BO60333 1816 aa21.49■■□□□ 1.03
PBX3-212ENST00000538998 MYOM2P54296 1465 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms