RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 KCNA6P17658 529 aa22.68■■□□□ 1.22
SCNN1A-212ENST00000538979 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
SCNN1A-212ENST00000538979 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
SCNN1A-212ENST00000538979 CHD2O14647 1828 aaKnown RBP22.66■■□□□ 1.22
SCNN1A-212ENST00000538979 TMEM94Q12767 1356 aa22.66■■□□□ 1.22
SCNN1A-212ENST00000538979 TMEM131LA2VDJ0 1609 aa22.66■■□□□ 1.22
SCNN1A-212ENST00000538979 IQGAP3Q86VI3 1631 aa22.66■■□□□ 1.22
SCNN1A-212ENST00000538979 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
SCNN1A-212ENST00000538979 E9PCH4 1651 aa22.65■■□□□ 1.22
SCNN1A-212ENST00000538979 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
SCNN1A-212ENST00000538979 MSH6P52701 1360 aa22.64■■□□□ 1.22
SCNN1A-212ENST00000538979 PROSER2Q86WR7 435 aaPredicted RBP22.64■■□□□ 1.21
SCNN1A-212ENST00000538979 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
SCNN1A-212ENST00000538979 DIP2AQ14689 1571 aa22.62■■□□□ 1.21
SCNN1A-212ENST00000538979 PLEKHG1Q9ULL1 1385 aa22.62■■□□□ 1.21
SCNN1A-212ENST00000538979 ZFYVE9O95405 1425 aa22.6■■□□□ 1.21
SCNN1A-212ENST00000538979 RIMS2Q9UQ26 1411 aa22.6■■□□□ 1.21
SCNN1A-212ENST00000538979 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
SCNN1A-212ENST00000538979 PHLPP1O60346 1717 aa22.58■■□□□ 1.21
SCNN1A-212ENST00000538979 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
SCNN1A-212ENST00000538979 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
SCNN1A-212ENST00000538979 NCOA3Q9Y6Q9 1424 aa22.53■■□□□ 1.2
SCNN1A-212ENST00000538979 TRPM2O94759 1503 aa22.52■■□□□ 1.2
SCNN1A-212ENST00000538979 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
SCNN1A-212ENST00000538979 TBX22Q9Y458 520 aa22.51■■□□□ 1.19
SCNN1A-212ENST00000538979 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
SCNN1A-212ENST00000538979 NUP155O75694 1391 aa22.5■■□□□ 1.19
SCNN1A-212ENST00000538979 SLAIN2Q9P270 581 aa22.48■■□□□ 1.19
SCNN1A-212ENST00000538979 RBM33Q96EV2 1170 aaKnown RBP22.47■■□□□ 1.19
SCNN1A-212ENST00000538979 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.46■■□□□ 1.19
SCNN1A-212ENST00000538979 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SCNN1A-212ENST00000538979 CADPS2Q86UW7 1296 aa22.44■■□□□ 1.18
SCNN1A-212ENST00000538979 JCADQ9P266 1359 aa22.44■■□□□ 1.18
SCNN1A-212ENST00000538979 KIF1BO60333 1816 aa22.43■■□□□ 1.18
SCNN1A-212ENST00000538979 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
SCNN1A-212ENST00000538979 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
SCNN1A-212ENST00000538979 ATF3P18847 181 aa22.42■■□□□ 1.18
SCNN1A-212ENST00000538979 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
SCNN1A-212ENST00000538979 C19orf44Q9H6X5 657 aa22.39■■□□□ 1.17
SCNN1A-212ENST00000538979 SHPRHQ149N8 1683 aa22.39■■□□□ 1.17
SCNN1A-212ENST00000538979 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.17
SCNN1A-212ENST00000538979 NUTM2DQ5VT03 806 aaPredicted RBP22.38■■□□□ 1.17
SCNN1A-212ENST00000538979 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
SCNN1A-212ENST00000538979 DCCP43146 1447 aa22.37■■□□□ 1.17
SCNN1A-212ENST00000538979 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
SCNN1A-212ENST00000538979 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
SCNN1A-212ENST00000538979 RGS17Q9UGC6 210 aaPredicted RBP22.36■■□□□ 1.17
SCNN1A-212ENST00000538979 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
SCNN1A-212ENST00000538979 SPATA31A6Q5VVP1 1343 aa22.35■■□□□ 1.17
SCNN1A-212ENST00000538979 AMOTL2Q9Y2J4 779 aa22.33■■□□□ 1.17
SCNN1A-212ENST00000538979 MEX3CQ5U5Q3 659 aaKnown RBP22.32■■□□□ 1.16
SCNN1A-212ENST00000538979 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
SCNN1A-212ENST00000538979 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
SCNN1A-212ENST00000538979 NEXMIFQ5QGS0 1516 aa22.28■■□□□ 1.16
SCNN1A-212ENST00000538979 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
SCNN1A-212ENST00000538979 POTEAQ6S8J7 498 aa22.27■■□□□ 1.16
SCNN1A-212ENST00000538979 PTPRUQ92729 1446 aa22.26■■□□□ 1.15
SCNN1A-212ENST00000538979 ZNF772Q68DY9 489 aaPredicted RBP22.26■■□□□ 1.15
SCNN1A-212ENST00000538979 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
SCNN1A-212ENST00000538979 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
SCNN1A-212ENST00000538979 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
SCNN1A-212ENST00000538979 NAIPQ13075 1403 aa22.23■■□□□ 1.15
SCNN1A-212ENST00000538979 ADGRL3Q9HAR2 1447 aa22.23■■□□□ 1.15
SCNN1A-212ENST00000538979 LRP6O75581 1613 aa22.22■■□□□ 1.15
SCNN1A-212ENST00000538979 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
SCNN1A-212ENST00000538979 MST1RQ04912 1400 aa22.2■■□□□ 1.14
SCNN1A-212ENST00000538979 VGFO15240 615 aaPredicted RBP22.19■■□□□ 1.14
SCNN1A-212ENST00000538979 METP08581 1390 aa22.19■■□□□ 1.14
SCNN1A-212ENST00000538979 HFM1A2PYH4 1435 aa22.19■■□□□ 1.14
SCNN1A-212ENST00000538979 PPLO60437 1756 aa22.19■■□□□ 1.14
SCNN1A-212ENST00000538979 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
SCNN1A-212ENST00000538979 PTCH1Q13635 1447 aa22.17■■□□□ 1.14
SCNN1A-212ENST00000538979 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
SCNN1A-212ENST00000538979 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
SCNN1A-212ENST00000538979 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
SCNN1A-212ENST00000538979 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
SCNN1A-212ENST00000538979 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
SCNN1A-212ENST00000538979 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
SCNN1A-212ENST00000538979 SLC4A1APQ9BWU0 796 aaKnown RBP22.12■■□□□ 1.13
SCNN1A-212ENST00000538979 LAMC1P11047 1609 aa22.11■■□□□ 1.13
SCNN1A-212ENST00000538979 CDK12Q9NYV4 1490 aaPredicted RBP22.1■■□□□ 1.13
SCNN1A-212ENST00000538979 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
SCNN1A-212ENST00000538979 RXRBP28702 533 aa22.09■■□□□ 1.13
SCNN1A-212ENST00000538979 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
SCNN1A-212ENST00000538979 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
SCNN1A-212ENST00000538979 AFF2P51816 1311 aa22.05■■□□□ 1.12
SCNN1A-212ENST00000538979 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
SCNN1A-212ENST00000538979 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
SCNN1A-212ENST00000538979 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
SCNN1A-212ENST00000538979 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
SCNN1A-212ENST00000538979 ROBO2Q9HCK4 1378 aa22.01■■□□□ 1.11
SCNN1A-212ENST00000538979 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
SCNN1A-212ENST00000538979 C8orf37Q96NL8 207 aa22.01■■□□□ 1.11
SCNN1A-212ENST00000538979 COL22A1Q8NFW1 1626 aaPredicted RBP21.99■■□□□ 1.11
SCNN1A-212ENST00000538979 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
SCNN1A-212ENST00000538979 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
SCNN1A-212ENST00000538979 RBM6P78332 1123 aaKnown RBP21.96■■□□□ 1.11
SCNN1A-212ENST00000538979 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
SCNN1A-212ENST00000538979 NPHP3Q7Z494 1330 aa21.96■■□□□ 1.11
SCNN1A-212ENST00000538979 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms